| spacy-test | | Random set of articles used for testing in the development of the RESTful spaCy parsing web service. Since development is now finished, they are released for the community to use. | 131 K | Nico Colic | Nico Colic | 2023-11-29 | Released | |
| Preeclampsia | | A collection of titles and abstracts of "Preeclampsia"-related papers. They were extracted from PubMed using the MeSH term "Preeclampsia" and specifying the language to be "English, on 11th September, 2017.
The texts were then annotated by PubDictionaries using the dictionary "Preeclampsia". | 58.7 K | | callahan_tiff | 2023-11-29 | Developing | |
| LitCovid-PD-GO-BP | | Terms for biological prosesses, as defined in GO | 374 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| UBERON-AE | | Annotation for anatomical entities based on the "Anatomical Entity" subtree of UBERON ontology.
Annotations are automatically produced using PubDictionaries with threshold: 0.85. | 859 K | DBCLS | Jin-Dong Kim | 2023-11-29 | Developing | |
| GlyCosmos600-Glycan-Motif-Structure | | | 919 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| oger-json-test | | Test corpus for testing OGER web service | 97.6 K | | Nico Colic | 2023-11-29 | Testing | |
| chemicals | | | 0 | | pruas_18 | 2023-11-29 | Uploading | |
| PubmedHPO | | Human phenotype annotation to PubMed abstracts, based on the HPO ontology | 12.4 M | Tudor Groza | tudor | 2023-11-24 | Beta | |
| LitCovid-PD-CLO | | | 3.73 M | | Jin-Dong Kim | 2023-11-24 | Developing | |
| DisGeNET | | Disease-Gene association annotation. | 3.12 M | Nuria Queralt | Jin-Dong Kim | 2023-11-24 | Beta | |
| LitCovid-PD-CHEBI | | | 1.43 M | | Jin-Dong Kim | 2023-11-24 | Developing | |
| PubMed_ArguminSci | | Predictions for PubMed automatically extracted with the ArguminSci tool (https://github.com/anlausch/ArguminSci). | 777 K | | zebet | 2023-11-24 | Released | |
| LitCovid-PD-FMA-UBERON | | | 1.3 M | | Jin-Dong Kim | 2023-11-28 | Developing | |
| NGLY1-deficiency | | A collection of PubMed abstracts that may be related to NGLY1 deficiency. | 60.5 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| preeclampsia_genes | | | 17.8 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| Preeclampsia-compare | | | 67.2 K | | Jin-Dong Kim | 2023-11-29 | Testing | |
| pubmed-enju-pas | | Annotating PubMed abstracts for predicate-argument structure (PAS). Enju 2.4.2 is used to automatically compute PAS. | 19.1 M | Enju | Jin-Dong Kim | 2023-11-24 | Developing | |
| Biotea | | NCBO annotation on full text for PMC articles. Currently including only a small set of 2811 articles corresponding to those supporting curated diesease-protein annotation from UniProt and with machine-processable full text. | 894 K | L. Garcia | | 2023-11-24 | Developing | |
| bionlp-st-ge-2016-reference-eval | | | 426 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| LitCovid-PD-GlycoEpitope | | | 999 | | Jin-Dong Kim | 2023-11-29 | Developing | |
