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Annotators

Below is a list of pre-registered, automatic annotation services which are interoperable with PubAnnotation.

If you do not know an applicable annotation service to your purpose, you may want to take a look at PubDictionaries, which is a highly customizable, dictionary-based text annotation service.

NameDescriptionMaintainerUpdated_at

1-20 / 39 すべて表示
PD-GlycoEpitope-B A batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'Jin-Dong Kim2021-01-17
PD-GO-BP-B Biological Processes as defined in GOJin-Dong Kim2021-01-14
PD-UBERON-AE It annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. Threshold is set to 0.85.Jin-Dong Kim2021-01-11
PD-UBERON-AE-B It annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. It used the default threshold, 0.85. It uses the batch mode annotation, and may be used for annotation to a large amount of documents.Jin-Dong Kim2021-01-11
EnjuParser Enju HPSG Parser developed by University of Tokyo.Jin-Dong Kim2020-12-31
PD-CHEBI-B Jin-Dong Kim2020-12-26
PD-CHEBI Pubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 versionJin-Dong Kim2020-12-26
PD-MONDO PubDictionaries annotation with the MONDO dictionary.Jin-Dong Kim2020-12-23
PD-MONDO-B PubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.Jin-Dong Kim2020-12-23
FirstAuthorDictionay AikoHIRAKI2020-10-08
Cellosaurus_v35 Annotator based on dictionary Cellosaurus version 35 in PubDictionarieszebet2020-08-12
PD-HP Jin-Dong Kim2020-06-23
PD-HP-B Jin-Dong Kim2020-04-28
PD-FMA-PAE Physical Anatomical Entities from FMAJin-Dong Kim2020-04-18
PD-FMA-PAE-B Batch mode annotator of PD-FMA-PAEJin-Dong Kim2020-04-18
PubTator PubTator annotation provided by NCBIJin-Dong Kim2020-04-15
Cellosaurus_v33 Annotator based on dictionary Cellosaurus version 33 in PubDictionarieszebet2020-04-15
PD-Preeclampsia-B Jin-Dong Kim2020-04-04
PD-NGLY1-deficiency-B A batch annotator for NGLY1 deficiencyJin-Dong Kim2020-04-04
PD-GlycoProteins-B Jin-Dong Kim2020-04-04
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