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Jin-Dong Kim
User info
Collections
NameDescriptionUpdated at
11-12 / 12 show all
PreeclampsiaPreeclampsia-related annotations for text mining2019-03-10
GlycoBiologyAnnotations made to the titles and abstracts of the journal 'GlycoBiology'2019-03-10
Projects
NameTDescription# Ann. Updated atStatus
91-100 / 160 show all
LitCoin-entities-OrganismTaxon-PD9492023-11-27Testing
GlyCosmos600-Glycan-Motif-Structure9192023-11-29Developing
GlyCosmos600-MAT8632023-11-29Testing
bionlp-st-ge-2016-corefCoreference annotation to the benchmark data set (reference and test) of BioNLP-ST 2016 GE task. For detailed information, please refer to the benchmark reference data set (bionlp-st-ge-2016-reference) and benchmark test data set (bionlp-st-ge-2016-test).8532024-06-17Released
LitCovid-sample-PD-GO-BP-07082023-11-29Beta
LitCovid-sample-GO-BP6912023-11-29Testing
LitCovid-manual5402023-11-30Developing
test_lasige4942023-12-02Testing
bionlp-st-ge-2016-reference-eval4262023-11-29Testing
LitCovid-sample-PD-UBERONPubDictionaries annotation for UBERON terms - updated at 2020-04-30 It is annotation for anatomical entities based on Uberon. The terms in Uberon are uploaded in PubDictionaries (Uberon), with which the annotations in this project are produced. The parameter configuration used for this project is here. Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. 3102023-11-28Beta
Automatic annotators
NameDescription
31-39 / 39 show all
PD-NCBIGene
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
Glycan-Motif-Image
PD-MAT
PD-CLO
PD-GlycoEpitope
PD-NCBITaxon
PD-UBERON-AE-2023It annotates for anatomical entities, based on the UBERON-AE-2023 dictionary on PubDictionaries. Threshold is set to 0.85.
Glycan-Image
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.