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Jin-Dong Kim
User info
Collections
NameDescriptionUpdated at
11-12 / 12 show all
LitCoin-Test2021-12-23
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
Projects
NameTDescription # Ann.Updated atStatus
1-10 / 159 show all
GlyCosmos600-MAT8632023-11-29Testing
MENA-example52023-11-29
LitCovid-sample-PD-MAT2512023-11-29Developing
example-dialog02023-11-27Testing
LitCovid-PD-HP922 K2023-11-28Beta
LitCovid-sample-PD-HP2112023-11-29Testing
LitCovid-sample-Glycan3.21 K2023-11-29Testing
LitCoin-training-merged14.8 K2023-11-24
GlyCosmos6-HP02023-11-28
tutorial152023-11-29Testing
Automatic annotators
NameDescription
31-38 / 38 show all
PD-NCBIGene
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
Glycan-Motif-Image
PD-MAT
PD-CLO
PD-GlycoEpitope
PD-NCBITaxon
PD-UBERON-AE-2023It annotates for anatomical entities, based on the UBERON-AE-2023 dictionary on PubDictionaries. Threshold is set to 0.85.
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.