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Jin-Dong Kim
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Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription# Ann.Updated atStatus
101-110 / 160 show all
GlyCosmos600-GlycoEpitope2772023-11-27Testing
GlyCosmos-GlycanStructure-c02023-11-29Testing
test_disfluency_annotation_auto_jp02023-12-28Testing
EDAM-DFOannotation for EDAM terms for data, formats, and operations12.5 K2023-11-29Testing
test-21061417.8 K2024-01-05Testing
CORD-19-Sentences13.4 M2023-11-24Testing
DisGeNet-2017-sample2.93 K2023-11-29Testing
GO-MFAnnotation for molecular functions as defined in the "Molecular Function" subtree of Gene Ontology19.7 K2023-12-04Testing
DocumentLevelAnnotationSampleA sample project for document level annotation472023-11-29Testing
LitCoin-sentences4.94 K2023-11-29Testing
Automatic annotators
NameDescription
31-39 / 39 show all
PD-NCBIGene
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
Glycan-Motif-Image
PD-MAT
PD-CLO
PD-GlycoEpitope
PD-NCBITaxon
PD-UBERON-AE-2023It annotates for anatomical entities, based on the UBERON-AE-2023 dictionary on PubDictionaries. Threshold is set to 0.85.
Glycan-Image
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.