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Jin-Dong Kim
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NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription# Ann.Updated atStatus
91-100 / 160 show all
GlycosmosP-GlycoEpitope242023-11-29Testing
GlyCosmos600-GlycoProteinsGlycoProtein annotations were made using the glycoprotein-name dictionary on PubDictionaries: http://pubannotation.org/projects/GlyCosmos600-docs The documents were imported from the GlyCosmos600-docs project: http://pubannotation.org/projects/GlyCosmos600-docs3.68 K2023-11-27Testing
bionlp-st-ge-2016-reference-eval4262023-11-29Testing
LitCovid-sample-DRON02023-11-29Testing
LitCovid-sample-CHEBI1.44 K2023-11-29Testing
speech-test62023-11-26Testing
EDAM-topicsannotation for EDAM topics11.6 K2023-11-29Testing
CORD-19-SciBite-sentences11.2 K2023-11-26Testing
uniprot-humanUniprot proteins for human21.8 K2023-11-29Testing
LitCoin-entities-OrganismTaxon-PD9492023-11-27Testing
Automatic annotators
NameDescription
31-39 / 39 show all
PD-NCBIGene
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
Glycan-Motif-Image
PD-MAT
PD-CLO
PD-GlycoEpitope
PD-NCBITaxon
PD-UBERON-AE-2023It annotates for anatomical entities, based on the UBERON-AE-2023 dictionary on PubDictionaries. Threshold is set to 0.85.
Glycan-Image
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.