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Jin-Dong Kim
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Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription# Ann.Updated at Status
121-130 / 160 show all
LitCovid-PD-GO-BPTerms for biological prosesses, as defined in GO374 K2023-11-29Developing
example2122023-11-29Testing
LitCovid-TimeML426 K2023-11-29Developing
preeclampsia_genes17.8 K2023-11-29Developing
GlyCosmos600-Glycan-Motif-Structure9192023-11-29Developing
Glycosmos6-MATAutomatic annotation by PD-MAT.263 K2023-11-29Developing
EDAM-DFOannotation for EDAM terms for data, formats, and operations12.5 K2023-11-29Testing
Grays_part2_test8.57 K2023-11-29Testing
DisGeNet-2017-sample2.93 K2023-11-29Testing
CORD-19-sample-paragraphs282023-11-29Developing
Automatic annotators
NameDescription
31-39 / 39 show all
PD-NCBIGene
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
Glycan-Motif-Image
PD-MAT
PD-CLO
PD-GlycoEpitope
PD-NCBITaxon
PD-UBERON-AE-2023It annotates for anatomical entities, based on the UBERON-AE-2023 dictionary on PubDictionaries. Threshold is set to 0.85.
Glycan-Image
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.