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Jin-Dong Kim
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NameT Description# Ann.Updated atStatus
71-80 / 158 show all
LitCoin-PubTator-for-TuningA set of randomly selected PubMed articles with PubTator annotation. The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows: 'Gene' -> 'GeneOrGeneProduct', 'Disease' -> 'DiseaseOrPhenotypicFeature', 'Chemical' -> 'ChemicalEntity' 'Species' -> 'OrganismTaxon' 'Mutation' -> 'SequenceVariant' 'CellLine' -> 'CellLine'14.2 K2023-11-29
CORD-19-sample-HP392023-11-27Developing
LitCovid-sample-HP02023-11-29Testing
LitCovid-sample-GO-BP6912023-11-29Testing
LitCovid-sample-CHEBI1.44 K2023-11-29Testing
LitCovid-sample-PD-IDO1.27 K2023-11-28Beta
PubMed-French-testA collection of PubMed abstract written in French02023-11-29Developing
LitCovid-sample-Pubtator3.86 K2023-11-28Uploading
LitCovid-sample-sentences2.3 K2023-11-29Beta
LitCovid-sample-MedDRA1852023-11-27Testing
Automatic annotators
NameDescription
11-20 / 40 show all
PD-FMA-PAEPhysical Anatomical Entities from FMA
PD-UBERON-AE-BIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. It used the default threshold, 0.85. It uses the batch mode annotation, and may be used for annotation to a large amount of documents.
PD-GlycanStructures-B
PD-GlycoGenes-B
PD-GlycoProteins-B
PD-FMA-PAE-BBatch mode annotator of PD-FMA-PAE
PD-Preeclampsia-B
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
EnjuParserEnju HPSG Parser developed by University of Tokyo.
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
Editors
NameDescription
1-1 / 1
TextAEThe official stable version of TextAE.