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Jin-Dong Kim
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Projects
NameTDescription# Ann.Updated at Status
1-10 / 161 show all
Anatomy-UBERONAnatomical structures based on UBERON.2.12 M2024-09-19Developing
GlyCosmos15-Glycan21.4 K2024-09-19Developing
Anatomy-MATAnatomical structures based on Minimal Anatomical Terminology (MAT).778 K2024-09-19Developing
GlyCosmos15-docsAnalytical_Chemistry Biochim_Biophys_Acta Carbohydrate_Research Cell Glycobiology Glycoconjugate_Journal J_Am_Chem_Soc Journal_of_Biological_Chemistry Journal_of_Proteome_Research Journal_of_Proteomics Molecular_and_Cellular_Proteomics Nature_Biotechnology Nature_Communications Nature_Methods Scientific_Reports02024-09-19Released
NCBITAXONannotation for NCBI taxonomy. Automatic annotation by PD-NCBITaxon.1.1 M2024-09-18Developing
Glycosmos15-GlycoEpitope27.8 K2024-09-18Developing
mondo_diseaseannotation for diseases and disorders as defined in MONDO. Automatic annotation by PD-MONDO.1.16 M2024-09-18Developing
testtesttest17.4 K2024-09-16Developing
GlyCosmos600-FMA13.8 K2024-09-12
GlyCosmos6-Glycan-Motif-Image87.8 K2024-07-30Developing
Automatic annotators
NameDescription
11-20 / 40 show all
PD-UBERON-AE-BIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. It used the default threshold, 0.85. It uses the batch mode annotation, and may be used for annotation to a large amount of documents.
PD-GlycanStructures-B
PD-GlycoGenes-B
PD-GlycoProteins-B
PD-FMA-PAE-BBatch mode annotator of PD-FMA-PAE
PD-Preeclampsia-B
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
EnjuParserEnju HPSG Parser developed by University of Tokyo.
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
PD-NCBITaxon-B
Editors
NameDescription
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TextAEThe official stable version of TextAE.