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Jin-Dong Kim
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Collections
NameDescriptionUpdated at
11-12 / 12 show all
LitCoin-Test2021-12-23
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
Projects
NameT Description# Ann.Updated atStatus
61-70 / 161 show all
LitCovid-sample-MedDRA1852023-11-27Testing
CORD-19-sample-sentences1612023-11-27Developing
LitCovid-sample-PD-MONDO1.21 K2023-11-27Developing
LitCovid-sample-PD-FMA1.93 K2023-11-28Beta
CORD-19-sample-CHEBI162023-11-29Developing
LitCovid-sample-DRON02023-11-29Testing
CORD-19-sample-paragraphs282023-11-29Developing
CORD-19-sample-IDO762023-11-29Developing
GlyCosmos600-GlycoGenes872023-11-28Testing
CORD-19-PD-HPPubDictionaries annotation for HP terms - updated at 2020-04-30 Disease term annotation based on HP. Version 2020-04-20. The terms in HP are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here. Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved.1.15 M2023-11-29Released
Automatic annotators
Name Description
31-39 / 39 show all
PD-FMA-PAEPhysical Anatomical Entities from FMA
PD-CLO-B
PD-CLO
PD-CHEBI-B
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
Glycan-Motif-Image
Glycan-Image
EnjuParserEnju HPSG Parser developed by University of Tokyo.
discourse-simplifierA discourse analyzer developed by Univ. Manchester.
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.