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Jin-Dong Kim
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Name DescriptionUpdated at
11-11 / 11 show all
bionlp-st-ge-2016The 2016 edition of the Genia event extraction (GE) task organized within BioNLP-ST 20162019-03-11
Projects
NameTDescription# Ann.Updated atStatus
41-50 / 158 show all
LitCovid-docs-s02023-11-29Released
Grays_part2_test8.57 K2023-11-29Testing
Grays_part1_test02023-11-29Testing
LitCovid-PubTator-s1962023-11-29
LitCovid-manual5402023-11-30Developing
glycogenes2.75 K2023-11-30Testing
LitCovid-PD-MONDO-v1PubDictionaries annotation for disease terms - updated at 2020-04-20 It is based on MONDO Version 2020-04-20. The terms in MONDO are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here. Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved.13.4 K2023-11-29Released
LitCoin-PubTator-for-TuningA set of randomly selected PubMed articles with PubTator annotation. The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows: 'Gene' -> 'GeneOrGeneProduct', 'Disease' -> 'DiseaseOrPhenotypicFeature', 'Chemical' -> 'ChemicalEntity' 'Species' -> 'OrganismTaxon' 'Mutation' -> 'SequenceVariant' 'CellLine' -> 'CellLine'14.2 K2023-11-29
CORD-19-sample-HP392023-11-27Developing
LitCovid-sample-HP02023-11-29Testing
Automatic annotators
Name Description
31-40 / 40 show all
PD-FMA-PAEPhysical Anatomical Entities from FMA
PD-CLO-B
PD-CLO
PD-CHEBI-B
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
Glycan-Motif-Image
Glycan-Image
Glycan-GlyCosmos
EnjuParserEnju HPSG Parser developed by University of Tokyo.
discourse-simplifierA discourse analyzer developed by Univ. Manchester.
Editors
NameDescription
1-1 / 1
TextAEThe official stable version of TextAE.