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Jin-Dong Kim
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Collections
NameDescriptionUpdated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
GlyCosmos15Collection of annotations to the abstracts from the following journals: Analytical_Chemistry Biochim_Biophys_Acta Carbohydrate_Research Cell Glycobiology Glycoconjugate_Journal J_Am_Chem_Soc Journal_of_Biological_Chemistry Journal_of_Proteome_Research Journal_of_Proteomics Molecular_and_Cellular_Proteomics Nature_Biotechnology Nature_Communications Nature_Methods Scientific_Reports 2024-09-19
Projects
NameTDescription# Ann. Updated atStatus
31-40 / 161 show all
GlyCosmos6-Glycan-Motif-Image87.8 K2024-07-30Developing
Preeclampsia-compare67.2 K2023-11-29Testing
NGLY1-deficiencyA collection of PubMed abstracts that may be related to NGLY1 deficiency.60.5 K2023-11-29Developing
genia-medco-corefCoreference annotation made to the Genia corpus, following the MUC annotation scheme. It is a product of the collaboration between the Genia and the MedCo projects.45.9 K2023-11-24Developing
GO-BPAnnotation for biological processes as defined in the "Biological Process" subset of Gene Ontology35.4 K2023-11-29Developing
CHEMDNER-training-testThe training subset of the CHEMDNER corpus29.4 K2023-11-27Testing
Glycosmos15-GlycoEpitope27.8 K2024-09-18Developing
uniprot-humanUniprot proteins for human21.8 K2023-11-29Testing
GlyCosmos15-Glycan21.4 K2024-09-19Developing
Glycosmos6-GlycoEpitopeAutomatic annotation by PD-GlycoEpitope.19.9 K2023-11-28Developing
Automatic annotators
Name Description
1-10 / 40 show all
discourse-simplifierA discourse analyzer developed by Univ. Manchester.
EnjuParserEnju HPSG Parser developed by University of Tokyo.
Glycan-GlyCosmos
Glycan-Image
Glycan-Motif-Image
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
PD-CHEBI-B
PD-CLO
PD-CLO-B
PD-FMA-PAEPhysical Anatomical Entities from FMA
Editors
Name Description
1-1 / 1
TextAEThe official stable version of TextAE.