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Jin-Dong Kim
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Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription# Ann. Updated atStatus
51-60 / 160 show all
GlyCosmos600-GlycanStructure972023-11-29Testing
CORD-19-sample-MONDO1132023-11-29Developing
CORD-19-sample-sentences1612023-11-27Developing
LitCovid-sample-MedDRA1852023-11-27Testing
LitCovid-PubTator-s1962023-11-29
Test-SequenceVariant2002023-11-28
LitCovid-sample-PD-HP2112023-11-29Testing
test102122023-11-24
LitCovid-sample-PD-MAT2512023-11-29Developing
GlyCosmos600-GlycoEpitope2772023-11-27Testing
Automatic annotators
Name Description
1-10 / 39 show all
discourse-simplifierA discourse analyzer developed by Univ. Manchester.
EnjuParserEnju HPSG Parser developed by University of Tokyo.
Glycan-Image
Glycan-Motif-Image
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
PD-CHEBI-B
PD-CLO
PD-CLO-B
PD-FMA-PAEPhysical Anatomical Entities from FMA
PD-FMA-PAE-BBatch mode annotator of PD-FMA-PAE
Editors
Name Description
1-2 / 2
TextAETextAE version 5, which enables edition of attributes of denotations.
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.