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Jin-Dong Kim
User info
Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameT Description# Ann.Updated atStatus
51-60 / 160 show all
LitCovid-sample-GO-BP6912023-11-29Testing
pubtator-sampleSample annotation of PubTator produced by Zhiyong Lu et al.282023-11-27Testing
GlycoConjugate-collectionThe PubMed entries (titles and abstracts) from the journal of GlycoConjugate02023-11-28Developing
LitCovid-sample-PD-IDO1.27 K2023-11-28Beta
LitCovid-PubTator-s1962023-11-29
Grays_part1_test02023-11-29Testing
LitCovid-sample-Pubtator3.86 K2023-11-28Uploading
EDAM-DFOannotation for EDAM terms for data, formats, and operations12.5 K2023-11-29Testing
Grays_part2_test8.57 K2023-11-29Testing
LitCovid-docs-s02023-11-29Released
Automatic annotators
Name Description
1-10 / 39 show all
discourse-simplifierA discourse analyzer developed by Univ. Manchester.
EnjuParserEnju HPSG Parser developed by University of Tokyo.
Glycan-Image
Glycan-Motif-Image
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
PD-CHEBI-B
PD-CLO
PD-CLO-B
PD-FMA-PAEPhysical Anatomical Entities from FMA
PD-FMA-PAE-BBatch mode annotator of PD-FMA-PAE
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.