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Jin-Dong Kim
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Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription # Ann.Updated atStatus
141-150 / 160 show all
hydroxychloroquine2.59 K2023-11-29Developing
test-21061417.8 K2024-01-05Testing
CORD-19-Sentences13.4 M2023-11-24Testing
LitCovid-PubTator5.88 M2023-11-24Beta
LitCovid-TimeML426 K2023-11-29Developing
CORD-19-sample-MONDO1132023-11-29Developing
LitCoin-sentences4.94 K2023-11-29Testing
Test-SequenceVariant2002023-11-28
testtesttest5.2 K2023-11-29Developing
LitCoin-entities13.6 K2023-11-29Testing
Automatic annotators
Name Description
21-30 / 39 show all
PD-HP-PA-B
PD-MAT
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PD-NCBIGene
PD-NCBITaxon
PD-NCBITaxon-B
PD-NGLY1-deficiency-BA batch annotator for NGLY1 deficiency
PD-Preeclampsia-B
PD-UBERON-AEIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. Threshold is set to 0.85.
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.