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Jin-Dong Kim
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Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription# Ann.Updated atStatus
61-70 / 160 show all
LitCovid-sample-Glycan3.21 K2023-11-29Testing
GlycosmosP-GlycoEpitope242023-11-29Testing
BioASQ-samplecollection of PubMed articles which appear in the BioASQ sample data set.02023-11-28Testing
LitCoin-entities13.6 K2023-11-29Testing
LitCovid-sample-DRON02023-11-29Testing
LitCovid-sample-CHEBI1.44 K2023-11-29Testing
LitCovid-GlycoBiologyArticles from GlycoBiology, received by the keyword "Covid-19"02023-11-29Testing
example-dialog02023-11-27Testing
GlyCosmos600-GlycoGenes872023-11-28Testing
speech-test62023-11-26Testing
Automatic annotators
Name Description
21-30 / 39 show all
PD-HP-PA-B
PD-MAT
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PD-NCBIGene
PD-NCBITaxon
PD-NCBITaxon-B
PD-NGLY1-deficiency-BA batch annotator for NGLY1 deficiency
PD-Preeclampsia-B
PD-UBERON-AEIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. Threshold is set to 0.85.
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.