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Jin-Dong Kim
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Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
Name TDescription# Ann.Updated atStatus
151-160 / 160 show all
Test-GeneOrGeneProduct1.17 K2023-11-29
test_lasige4942023-12-02Testing
Test-merged3.21 K2023-11-29
Test-SequenceVariant2002023-11-28
testtesttest5.2 K2023-11-29Developing
tutorial152023-11-29Testing
twitter-test132023-11-28Developing
UBERON-AEAnnotation for anatomical entities based on the "Anatomical Entity" subtree of UBERON ontology. Annotations are automatically produced using PubDictionaries with threshold: 0.85.859 K2023-11-29Developing
uniprot-humanUniprot proteins for human21.8 K2023-11-29Testing
uniprot-mouseProtein annotation based on UniProt11.5 K2023-11-28Developing
Automatic annotators
Name Description
11-20 / 39 show all
PD-GlycanStructures-B
PD-GlycoEpitope
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
PD-GlycoGenes20190927-B
PD-GlycoGenes-B
PD-GlycoProteins-B
PD-GO-BP-BBiological Processes as defined in GO
PD-HP
PD-HP-B
PD-HP-PA
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.