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Jin-Dong Kim
User info
Collections
NameDescriptionUpdated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
GlyCosmos15Collection of annotations to the abstracts from the following journals: Analytical_Chemistry Biochim_Biophys_Acta Carbohydrate_Research Cell Glycobiology Glycoconjugate_Journal J_Am_Chem_Soc Journal_of_Biological_Chemistry Journal_of_Proteome_Research Journal_of_Proteomics Molecular_and_Cellular_Proteomics Nature_Biotechnology Nature_Communications Nature_Methods Scientific_Reports 2024-09-19
Projects
NameTDescription # Ann.Updated atStatus
131-140 / 163 show all
LitCovid-sample-MedDRA1852023-11-27Testing
CORD-19-sample-sentences1612023-11-27Developing
LitCovid-sample-PD-MONDO1.21 K2023-11-27Developing
LitCovid-sample-PD-FMA1.93 K2023-11-28Beta
CORD-19-sample-CHEBI162023-11-29Developing
LitCovid-sample-DRON02023-11-29Testing
CORD-19-sample-paragraphs282023-11-29Developing
CORD-19-sample-IDO762023-11-29Developing
LitCoin-entities-OrganismTaxon-PD9492023-11-27Testing
hydroxychloroquine2.59 K2023-11-29Developing
Automatic annotators
NameDescription
1-10 / 38 show all
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.
PubTator-MutationTo pull the pre-computed mutation annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-DiseaseTo pull the pre-computed disease annotation from PubTator.
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
TextSentencersentence segmentation
PubTatorPubTator annotation provided by NCBI
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
Editors
NameDescription
1-1 / 1
TextAEThe official stable version of TextAE.