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Jin-Dong Kim
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Collections
NameDescriptionUpdated at
11-11 / 11 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
Projects
NameTDescription# Ann.Updated at Status
151-158 / 158 show all
test_lasige4942023-12-02Testing
GO-MFAnnotation for molecular functions as defined in the "Molecular Function" subtree of Gene Ontology19.7 K2023-12-04Testing
test_disfluency_annotation_auto_jp02023-12-28Testing
test-21061417.8 K2024-01-05Testing
bionlp-st-ge-2016-corefCoreference annotation to the benchmark data set (reference and test) of BioNLP-ST 2016 GE task. For detailed information, please refer to the benchmark reference data set (bionlp-st-ge-2016-reference) and benchmark test data set (bionlp-st-ge-2016-test).8532024-06-17Released
GlyCosmos6-Glycan-Motif-StructureAutomatic annotation by Covid-19_Glycan-Motif.107 K2024-07-25Developing
GlyCosmos6-UBERON689 K2024-07-25Developing
GlyCosmos6-Glycan-Image2.46 K2024-07-26Developing
Automatic annotators
NameDescription
1-10 / 40 show all
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.
PubTator-MutationTo pull the pre-computed mutation annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-DiseaseTo pull the pre-computed disease annotation from PubTator.
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
TextSentencersentence segmentation
PubTatorPubTator annotation provided by NCBI
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
Editors
Name Description
1-1 / 1
TextAEThe official stable version of TextAE.