> top > users > Jin-Dong Kim
Jin-Dong Kim
User info
Collections
NameDescriptionUpdated at
11-11 / 11 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
Projects
NameTDescription# Ann.Updated atStatus
31-40 / 158 show all
GlycoBiology-FMAFMA ontology-based annotation to GlycoBiology abstracts96.3 K2023-11-29Testing
EDAM-DFOannotation for EDAM terms for data, formats, and operations12.5 K2023-11-29Testing
Grays_part2_test8.57 K2023-11-29Testing
tutorial152023-11-29Testing
example2122023-11-29Testing
EDAM-topicsannotation for EDAM topics11.6 K2023-11-29Testing
Grays_part1_test02023-11-29Testing
ggdb-test2.4 K2023-11-29Testing
GlyCosmos600-MAT8632023-11-29Testing
GlyCosmos600-CLO1.73 K2023-11-28Testing
Automatic annotators
NameDescription
1-10 / 40 show all
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.
PubTator-MutationTo pull the pre-computed mutation annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-DiseaseTo pull the pre-computed disease annotation from PubTator.
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
TextSentencersentence segmentation
PubTatorPubTator annotation provided by NCBI
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
Editors
NameDescription
1-1 / 1
TextAEThe official stable version of TextAE.