> top > users > Jin-Dong Kim
Jin-Dong Kim
User info
Collections
NameDescriptionUpdated at
11-11 / 11 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
Projects
NameTDescription# Ann. Updated atStatus
121-130 / 158 show all
GO-MFAnnotation for molecular functions as defined in the "Molecular Function" subtree of Gene Ontology19.7 K2023-12-04Testing
Glycosmos6-GlycoEpitopeAutomatic annotation by PD-GlycoEpitope.19.9 K2023-11-28Developing
uniprot-humanUniprot proteins for human21.8 K2023-11-29Testing
CHEMDNER-training-testThe training subset of the CHEMDNER corpus29.4 K2023-11-27Testing
GO-BPAnnotation for biological processes as defined in the "Biological Process" subset of Gene Ontology35.4 K2023-11-29Developing
genia-medco-corefCoreference annotation made to the Genia corpus, following the MUC annotation scheme. It is a product of the collaboration between the Genia and the MedCo projects.45.9 K2023-11-24Developing
NGLY1-deficiencyA collection of PubMed abstracts that may be related to NGLY1 deficiency.60.5 K2023-11-29Developing
Preeclampsia-compare67.2 K2023-11-29Testing
GlycoBiology-FMAFMA ontology-based annotation to GlycoBiology abstracts96.3 K2023-11-29Testing
GlyCosmos6-Glycan-Motif-StructureAutomatic annotation by Covid-19_Glycan-Motif.107 K2024-07-25Developing
Automatic annotators
NameDescription
31-40 / 40 show all
PD-CHEBIPubdictionaries annotation using the terms sourced from CHEBI, the 2020-03-31 version
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PubTatorPubTator annotation provided by NCBI
TextSentencersentence segmentation
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
PubTator-DiseaseTo pull the pre-computed disease annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-MutationTo pull the pre-computed mutation annotation from PubTator.
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.
Editors
Name Description
1-1 / 1
TextAEThe official stable version of TextAE.