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Jin-Dong Kim
User info
Collections
NameDescriptionUpdated at
11-12 / 12 show all
PreeclampsiaPreeclampsia-related annotations for text mining2019-03-10
GlycoBiologyAnnotations made to the titles and abstracts of the journal 'GlycoBiology'2019-03-10
Projects
NameTDescription# Ann.Updated at Status
141-150 / 160 show all
MENA-example232023-11-24Testing
Test-Documents12023-11-24
GlyCosmosP-Glycan-Motif82023-11-24Developing
test102122023-11-24
GlyCosmos6-Glycan-Motif-Image87.8 K2023-11-24Developing
GlyCosmos6-CLOAutomatic annotation by PC-CLO.1.18 M2023-11-24Developing
GlyCosmos6-Glycan-Motif-StructureAutomatic annotation by Covid-19_Glycan-Motif.107 K2023-11-24Developing
NCBITAXONannotation for NCBI taxonomy. Automatic annotation by PD-NCBITaxon.502 K2023-11-24Developing
CORD-19-PD-UBERONPubDictionaries annotation for UBERON terms - updated at 2020-04-30 It is disease term annotation based on Uberon. The terms in Uberon are uploaded in PubDictionaries (Uberon), with which the annotations in this project are produced. The parameter configuration used for this project is here. Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved.1.42 M2023-11-24Released
LitCovid-PD-CHEBI1.43 M2023-11-24Developing
Automatic annotators
NameDescription
31-39 / 39 show all
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PubTatorPubTator annotation provided by NCBI
TextSentencersentence segmentation
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
PubTator-DiseaseTo pull the pre-computed disease annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-MutationTo pull the pre-computed mutation annotation from PubTator.
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.
Editors
NameDescription
1-2 / 2
TextAE-oldTextAE version 4, which was the latest stable version until Apr. 19, 2020.
TextAETextAE version 5, which enables edition of attributes of denotations.