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Jin-Dong Kim
User info
Collections
NameDescription Updated at
11-12 / 12 show all
Glycosmos6This collection contains annotation projects which target all the PubMed abstracts (at the time of January 14, 2022) from the 6 glycobiology-related journals: Glycobiology Glycoconjugate journal The Journal of biological chemistry Journal of proteome research Journal of proteomics Carbohydrate research 2023-11-16
LitCovid-sampleVarious annotations to a sample set of LitCovid, to demonstrate potential of harmonized various annotations.2021-01-14
Projects
NameTDescription# Ann. Updated atStatus
141-150 / 160 show all
LitCovid-sample-DRON02023-11-29Testing
PubMed-French-testA collection of PubMed abstract written in French02023-11-29Developing
BioASQ-samplecollection of PubMed articles which appear in the BioASQ sample data set.02023-11-28Testing
LitCovid-sample-HP02023-11-29Testing
Grays_part1_test02023-11-29Testing
LitCovid-docs-s02023-11-29Released
PubCasesCollectionabstracts in PubCases02023-11-29
GlyCosmos-GlycanStructure-c02023-11-29Testing
PubMed-2000abstracts published in 2000.02023-11-29Developing
pubmed-2016abstracts published in 201602023-11-28
Automatic annotators
NameDescription
31-39 / 39 show all
PD-MONDOPubDictionaries annotation with the MONDO dictionary.
PD-MONDO-BPubDictionaries annotation with the MONDO dictionary. Asynchronous protocol.
PubTatorPubTator annotation provided by NCBI
TextSentencersentence segmentation
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
PubTator-DiseaseTo pull the pre-computed disease annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-MutationTo pull the pre-computed mutation annotation from PubTator.
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.
Editors
NameDescription
1-1 / 1
TextAEThe official stable version of TextAE.