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PubMed:9845364 JSONTXT

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DisGeNET

Id Subject Object Predicate Lexical cue
T0 259-262 gene:6638 denotes SMN
T1 98-121 disease:C0026847 denotes Spinal muscular atrophy
T2 259-262 gene:3925 denotes SMN
T3 98-121 disease:C0026847 denotes Spinal muscular atrophy
T4 259-262 gene:6606 denotes SMN
T5 98-121 disease:C0026847 denotes Spinal muscular atrophy
T6 259-262 gene:6607 denotes SMN
T7 98-121 disease:C0026847 denotes Spinal muscular atrophy
T8 259-262 gene:6638 denotes SMN
T9 123-126 disease:C0026847 denotes SMA
T10 259-262 gene:3925 denotes SMN
T11 123-126 disease:C0026847 denotes SMA
T12 259-262 gene:6606 denotes SMN
T13 123-126 disease:C0026847 denotes SMA
T14 259-262 gene:6607 denotes SMN
T15 123-126 disease:C0026847 denotes SMA
T16 259-262 gene:6638 denotes SMN
T17 153-173 disease:C1285162 denotes degenerative disease
T18 259-262 gene:3925 denotes SMN
T19 153-173 disease:C1285162 denotes degenerative disease
T20 259-262 gene:6606 denotes SMN
T21 153-173 disease:C1285162 denotes degenerative disease
T22 259-262 gene:6607 denotes SMN
T23 153-173 disease:C1285162 denotes degenerative disease
R1 T0 T1 associated_with SMN,Spinal muscular atrophy
R2 T2 T3 associated_with SMN,Spinal muscular atrophy
R3 T4 T5 associated_with SMN,Spinal muscular atrophy
R4 T6 T7 associated_with SMN,Spinal muscular atrophy
R5 T8 T9 associated_with SMN,SMA
R6 T10 T11 associated_with SMN,SMA
R7 T12 T13 associated_with SMN,SMA
R8 T14 T15 associated_with SMN,SMA
R9 T16 T17 associated_with SMN,degenerative disease
R10 T18 T19 associated_with SMN,degenerative disease
R11 T20 T21 associated_with SMN,degenerative disease
R12 T22 T23 associated_with SMN,degenerative disease

bionlp-st-gro-2013-development

Id Subject Object Predicate Lexical cue
T1 21-24 Protein denotes SMN
T2 79-87 MessengerRNA denotes pre-mRNA
T8 259-262 Protein denotes SMN
T9 273-276 Protein denotes SMN
T10 293-302 CellComponent denotes cytoplasm
T11 311-318 Nucleus denotes nucleus
T12 353-356 Protein denotes SMN
T14 372-384 Spliceosome denotes spliceosomal
T15 385-399 Protein denotes snRNP proteins
T16 420-425 Protein denotes snRNP
T18 442-451 CellComponent denotes cytoplasm
T19 486-496 MutantProtein denotes mutant SMN
T20 498-509 MutantProtein denotes SMNdeltaN27
T22 547-553 Protein denotes snRNPs
T23 561-568 Nucleus denotes nucleus
T24 583-594 MutantProtein denotes SMNdeltaN27
T26 604-612 MessengerRNA denotes pre-mRNA
T28 638-651 Protein denotes wild-type SMN
T31 673-684 MutantProtein denotes SMN mutants
T33 766-769 Protein denotes SMN
T35 816-824 MessengerRNA denotes pre-mRNA
T39 903-906 Protein denotes SMN
T4 30-74 GeneProduct denotes spinal muscular atrophy disease gene product
T43 232-257 Protein denotes Survival of Motor Neurons
E1 88-96 RNASplicing denotes splicing
E3 123-126 Disease denotes SMA
E4 166-173 Disease denotes disease
E5 357-366 BindingToProtein denotes interacts
E6 426-434 BindingToRNA denotes assembly
E7 529-543 CellularComponentOrganizationAndBiogenesis denotes reorganization
E8 595-603 NegativeRegulation denotes inhibits
E9 613-621 RNASplicing denotes splicing
E10 652-662 PositiveRegulation denotes stimulates
E11 663-671 RNASplicing denotes splicing
E12 694-697 Disease denotes SMA
E14 825-833 RNASplicing denotes splicing
E15 856-871 RNABiosynthesis denotes mRNA biogenesis
E16 926-929 Disease denotes SMA
E2 98-121 Disease denotes Spinal muscular atrophy
E17 214-223 Mutation denotes mutations
E18 192-206 Decrease denotes reduced levels
E13 834-843 RegulatoryProcess denotes machinery
R1 T9 T10 locatedIn SMN,cytoplasm
R2 T9 T11 locatedIn SMN,nucleus
R3 T14 T15 hasPart spliceosomal,snRNP proteins
R4 E6 T18 locatedIn assembly,cytoplasm
R5 E7 T23 locatedIn reorganization,nucleus
R7 T2 E1 hasPatient pre-mRNA,splicing
R8 T12 E5 hasPatient SMN,interacts
R9 T15 E5 hasPatient snRNP proteins,interacts
R10 T16 E6 hasPatient snRNP,assembly
R11 T22 E7 hasPatient snRNPs,reorganization
R12 T24 E8 hasAgent SMNdeltaN27,inhibits
R13 E9 E8 hasPatient splicing,inhibits
R14 T26 E9 hasPatient pre-mRNA,splicing
R15 T28 E10 hasAgent wild-type SMN,stimulates
R16 E11 E10 hasPatient splicing,stimulates
R17 T35 E14 hasPatient pre-mRNA,splicing
R18 T8 E17 hasPatient SMN,mutations
R19 T8 E18 hasPatient SMN,reduced levels
R20 E14 E13 hasPatient splicing,machinery

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 30-53 Disease denotes spinal muscular atrophy http://purl.obolibrary.org/obo/MONDO_0001516
T2 98-121 Disease denotes Spinal muscular atrophy http://purl.obolibrary.org/obo/MONDO_0001516
T3 123-126 Disease denotes SMA http://purl.obolibrary.org/obo/MONDO_0019079|http://purl.obolibrary.org/obo/MONDO_0001516
T5 153-173 Disease denotes degenerative disease http://purl.obolibrary.org/obo/MONDO_0005559|http://purl.obolibrary.org/obo/MONDO_0024236
T7 694-697 Disease denotes SMA http://purl.obolibrary.org/obo/MONDO_0019079|http://purl.obolibrary.org/obo/MONDO_0001516
T9 926-929 Disease denotes SMA http://purl.obolibrary.org/obo/MONDO_0019079|http://purl.obolibrary.org/obo/MONDO_0001516

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 140-152 Body_part denotes motor neuron http://purl.obolibrary.org/obo/CL_0000100
T2 293-302 Body_part denotes cytoplasm http://purl.obolibrary.org/obo/GO_0005737
T3 311-318 Body_part denotes nucleus http://purl.obolibrary.org/obo/GO_0005634|http://purl.obolibrary.org/obo/UBERON_0000125
T5 442-451 Body_part denotes cytoplasm http://purl.obolibrary.org/obo/GO_0005737
T6 561-568 Body_part denotes nucleus http://purl.obolibrary.org/obo/GO_0005634|http://purl.obolibrary.org/obo/UBERON_0000125

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 30-53 Phenotype denotes spinal muscular atrophy HP:0007269
T2 98-121 Phenotype denotes Spinal muscular atrophy HP:0007269
T3 123-126 Phenotype denotes SMA HP:0007269
T4 694-697 Phenotype denotes SMA HP:0007269
T5 926-929 Phenotype denotes SMA HP:0007269

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 140-152 Cell denotes motor neuron http://purl.obolibrary.org/obo/CL:0000100
T2 146-152 Cell denotes neuron http://purl.obolibrary.org/obo/CL:0000540
T3 244-257 Cell denotes Motor Neurons http://purl.obolibrary.org/obo/CL:0000100