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PubMed:9838061 JSONTXT

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Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 87-92 Body_part denotes blood http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315
T3 334-339 Body_part denotes blood http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-14 protein denotes Anaphylatoxins
T2 15-18 protein denotes C5a
T3 23-26 protein denotes C3a
T4 34-55 protein denotes nuclear factor kappaB
T5 70-102 cell_type denotes human peripheral blood monocytes
T6 108-122 protein denotes anaphylatoxins
T7 123-126 protein denotes C5a
T8 131-134 protein denotes C3a
T9 222-225 protein denotes C5a
T10 230-233 protein denotes C3a
T11 290-293 protein denotes C5a
T12 298-301 protein denotes C3a
T13 317-349 cell_type denotes human peripheral blood monocytes
T14 431-446 DNA denotes kappaB sequence
T15 452-472 protein denotes p50 and p65 proteins
T16 505-526 protein denotes nuclear factor kappaB
T17 590-613 protein denotes anti-peptide antibodies
T18 640-643 protein denotes C5a
T19 652-658 protein denotes kappaB
T20 787-802 DNA denotes kappaB sequence
T21 885-897 protein denotes IkappaBalpha
T22 947-973 protein denotes anti-IkappaBalpha antibody
T23 1020-1026 protein denotes kappaB
T24 1062-1065 protein denotes C5a
T25 1070-1073 protein denotes C3a
T26 1083-1096 protein denotes cholera toxin
T27 1164-1170 protein denotes kappaB
T28 1199-1207 protein denotes TNFalpha
T29 1271-1285 protein denotes anaphylatoxins
T30 1286-1289 protein denotes C5a
T31 1294-1297 protein denotes C3a

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-103 Sentence denotes Anaphylatoxins C5a and C3a induce nuclear factor kappaB activation in human peripheral blood monocytes.
S2 104-189 Sentence denotes The anaphylatoxins C5a and C3a are involved in the regulation of cytokine production.
S3 190-289 Sentence denotes In this study the capability of C5a and C3a to induce transcription factor activation was examined.
S4 290-447 Sentence denotes C5a and C3a stimulation of human peripheral blood monocytes resulted in nuclear expression of a DNA binding activity with specificity to the kappaB sequence.
S5 448-639 Sentence denotes The p50 and p65 proteins, constituents of the prototypic nuclear factor kappaB, were identified as components of the DNA-protein complexes by anti-peptide antibodies in gel supershift assays.
S6 640-775 Sentence denotes C5a induced kappaB binding activity was detected 15 min after agonist stimulation, peaked at 30-40 min, and remained detectable at 2 h.
S7 776-974 Sentence denotes Binding to kappaB sequence was accompanied by an initial decrease and subsequent increase in the cytoplasmic IkappaBalpha levels, as detected by Western blotting using an anti-IkappaBalpha antibody.
S8 975-1128 Sentence denotes Pertussis toxin treatment markedly decreased kappaB binding activities induced by both C5a and C3a, whereas cholera toxin displayed no inhibitory effect.
S9 1129-1226 Sentence denotes Neither of the two toxins affected kappaB binding activity induced by TNFalpha in the same cells.
S10 1227-1397 Sentence denotes These results imply a potential role of the anaphylatoxins C5a and C3a in regulating leukocytes gene expression through G protein-coupled transcription factor activation.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-26 NP denotes Anaphylatoxins C5a and C3a
C2 70-102 NP denotes human peripheral blood monocytes
C3 104-134 NP denotes The anaphylatoxins C5a and C3a
C5 222-225 NP denotes C5a
C4 222-233 NP denotes C5a and C3a
C6 317-349 NP denotes human peripheral blood monocytes
C7 427-446 NP denotes the kappaB sequence
C8 448-472 NP denotes The p50 and p65 proteins
C9 474-526 NP denotes constituents of the prototypic nuclear factor kappaB
C10 640-643 NP denotes C5a
C11 787-802 NP denotes kappaB sequence
C12 1057-1073 NP denotes both C5a and C3a
C13 1140-1154 NP denotes the two toxins
C14 1267-1297 NP denotes the anaphylatoxins C5a and C3a
R1 C3 C1 coref-ident The anaphylatoxins C5a and C3a,Anaphylatoxins C5a and C3a
R2 C4 C3 coref-ident C5a and C3a,The anaphylatoxins C5a and C3a
R3 C6 C2 coref-ident human peripheral blood monocytes,human peripheral blood monocytes
R4 C9 C8 coref-appos constituents of the prototypic nuclear factor kappaB,The p50 and p65 proteins
R5 C10 C5 coref-ident C5a,C5a
R6 C11 C7 coref-ident kappaB sequence,the kappaB sequence
R7 C12 C4 coref-ident both C5a and C3a,C5a and C3a
R8 C13 C12 coref-ident the two toxins,both C5a and C3a
R9 C14 C13 coref-ident the anaphylatoxins C5a and C3a,the two toxins

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-14 protein_family_or_group denotes Anaphylatoxins
T2 15-18 protein_molecule denotes C5a
T3 23-26 protein_molecule denotes C3a
T4 34-55 protein_complex denotes nuclear factor kappaB
T5 70-102 cell_type denotes human peripheral blood monocytes
T6 108-122 protein_family_or_group denotes anaphylatoxins
T7 123-126 protein_molecule denotes C5a
T8 131-134 protein_molecule denotes C3a
T9 222-225 protein_molecule denotes C5a
T10 230-233 protein_molecule denotes C3a
T11 244-275 other_name denotes transcription factor activation
T12 290-293 protein_molecule denotes C5a
T13 298-301 protein_molecule denotes C3a
T14 317-349 cell_type denotes human peripheral blood monocytes
T15 386-406 other_name denotes DNA binding activity
T16 431-446 DNA_domain_or_region denotes kappaB sequence
T17 505-526 protein_complex denotes nuclear factor kappaB
T18 590-613 protein_family_or_group denotes anti-peptide antibodies
T19 617-638 other_name denotes gel supershift assays
T20 640-643 protein_molecule denotes C5a
T21 652-658 protein_molecule denotes kappaB
T22 787-802 DNA_domain_or_region denotes kappaB sequence
T23 873-884 other_name denotes cytoplasmic
T24 885-897 protein_molecule denotes IkappaBalpha
T25 921-937 other_name denotes Western blotting
T26 947-952 protein_family_or_group denotes anti-
T27 952-964 protein_molecule denotes IkappaBalpha
T28 1020-1026 protein_molecule denotes kappaB
T29 1062-1065 protein_molecule denotes C5a
T30 1070-1073 protein_molecule denotes C3a
T31 1083-1096 protein_molecule denotes cholera toxin
T32 1164-1170 protein_molecule denotes kappaB
T33 1199-1207 protein_molecule denotes TNFalpha
T34 1271-1285 protein_family_or_group denotes anaphylatoxins
T35 1286-1289 protein_molecule denotes C5a
T36 1294-1297 protein_molecule denotes C3a
T37 1312-1338 other_name denotes leukocytes gene expression
T38 1347-1364 other_name denotes G protein-coupled
T39 1365-1396 other_name denotes transcription factor activation

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 975-984 Disease denotes Pertussis http://purl.obolibrary.org/obo/MONDO_0005077
T2 1083-1090 Disease denotes cholera http://purl.obolibrary.org/obo/MONDO_0015766

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 70-75 OrganismTaxon denotes human 9606
T2 317-322 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 87-92 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T2 93-102 Body_part denotes monocytes http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054
T4 334-339 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T5 340-349 Body_part denotes monocytes http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054
T7 873-884 Body_part denotes cytoplasmic http://purl.obolibrary.org/obo/GO_0005737
T8 1312-1322 Body_part denotes leukocytes http://purl.obolibrary.org/obo/CL_0000738

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 93-102 Cell denotes monocytes http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054
T3 340-349 Cell denotes monocytes http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054
T5 1312-1322 Cell denotes leukocytes http://purl.obolibrary.org/obo/CL:0000738