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PubMed:9822625 JSONTXT

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GGDB-2020

Id Subject Object Predicate Lexical cue
T1 81-84 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T2 107-110 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T3 310-313 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T4 993-996 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T5 1111-1114 https://acgg.asia/db/ggdb/info/gg052 denotes GM3

ggdb-test

Id Subject Object Predicate Lexical cue
T1 81-84 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T2 107-110 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T3 310-313 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T4 993-996 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T5 1111-1114 https://acgg.asia/db/ggdb/info/gg052 denotes GM3

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 81-84 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T3 107-110 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T5 310-313 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T7 893-909 Glycan_Motif denotes lactosylceramide https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G84224TW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G74621DY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G20420WT
T10 993-996 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T12 1042-1058 Glycan_Motif denotes lactosylceramide https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G84224TW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G74621DY|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G20420WT
T15 1111-1114 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH

sentences

Id Subject Object Predicate Lexical cue
T1 0-94 Sentence denotes Expression cloning and functional characterization of human cDNA for ganglioside GM3 synthase.
T2 95-204 Sentence denotes Ganglioside GM3 is a major glycosphingolipid in the plasma membrane and is widely distributed in vertebrates.
T3 205-314 Sentence denotes We describe here the isolation of a human cDNA whose protein product is responsible for the synthesis of GM3.
T4 315-466 Sentence denotes The cloned cDNA spanned 2,359 base pairs, with an open reading frame encoding a protein of 362 amino acids with a predicted molecular mass of 41.7 kDa.
T5 467-671 Sentence denotes The deduced primary structure shows features characteristic of the sialyltransferase family, including a type II transmembrane topology and the sialylmotifs L at the center and S at the C-terminal region.
T6 672-839 Sentence denotes An amino acid substitution from aspartic acid to histidine was demonstrated at a position invariant in sialylmotif L of all the other sialyltransferases so far cloned.
T7 840-1059 Sentence denotes The best acceptor substrate for the gene product was lactosylceramide, and cells transfected with the cloned cDNA clearly exhibited de novo synthesis of GM3, with a measurable decrease in the precursor lactosylceramide.
T8 1060-1316 Sentence denotes Despite the ubiquitous distribution of ganglioside GM3 in human tissues, a major 2.4-kilobase transcript of the gene was found in a tissue-specific manner, with predominant expression in brain, skeletal muscle, and testis, and very low expression in liver.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 192-203 http://purl.obolibrary.org/obo/MAT_0000373 denotes vertebrates
T2 1247-1252 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T3 1254-1269 http://purl.obolibrary.org/obo/MAT_0000302 denotes skeletal muscle
T4 1263-1269 http://purl.obolibrary.org/obo/MAT_0000025 denotes muscle
T5 1275-1281 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis
T6 1310-1315 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 81-84 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T2 81-84 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T3 107-110 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T4 107-110 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T5 310-313 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T6 310-313 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T7 893-909 https://glytoucan.org/Structures/Glycans/G20420WT denotes lactosylceramide
T8 893-909 https://glytoucan.org/Structures/Glycans/G74621DY denotes lactosylceramide
T9 893-909 https://glytoucan.org/Structures/Glycans/G84224TW denotes lactosylceramide
T10 993-996 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T11 993-996 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T12 1042-1058 https://glytoucan.org/Structures/Glycans/G20420WT denotes lactosylceramide
T13 1042-1058 https://glytoucan.org/Structures/Glycans/G74621DY denotes lactosylceramide
T14 1042-1058 https://glytoucan.org/Structures/Glycans/G84224TW denotes lactosylceramide
T15 1111-1114 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T16 1111-1114 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 893-909 http://www.glycoepitope.jp/epitopes/EP0078 denotes lactosylceramide
T2 1042-1058 http://www.glycoepitope.jp/epitopes/EP0078 denotes lactosylceramide

FSU-PRGE

Id Subject Object Predicate Lexical cue
T1 69-93 protein denotes ganglioside GM3 synthase
T2 534-558 protein denotes sialyltransferase family
T3 806-824 protein denotes sialyltransferases

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 577-579 https://acgg.asia/db/ggdb/info/gg111 denotes II

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 81-84 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T2 107-110 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T3 310-313 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T4 893-909 Glycan denotes lactosylceramide https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T5 993-996 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T6 1042-1058 Glycan denotes lactosylceramide https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T7 1111-1114 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 893-909 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes lactosylceramide http://www.glycoepitope.jp/epitopes/EP0078
T2 1042-1058 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes lactosylceramide http://www.glycoepitope.jp/epitopes/EP0078

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 54-59 OrganismTaxon denotes human 9606
T2 241-246 OrganismTaxon denotes human 9606
T3 1118-1123 OrganismTaxon denotes human 9606

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 147-162 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T2 580-593 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T3 1192-1198 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T4 1247-1252 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T6 1254-1269 Body_part denotes skeletal muscle http://purl.obolibrary.org/obo/UBERON_0001134|http://purl.obolibrary.org/obo/UBERON_0014892|http://purl.obolibrary.org/obo/UBERON_0014895
T9 1275-1281 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T10 1310-1315 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 192-203 Body_part denotes vertebrates http://purl.obolibrary.org/obo/MAT_0000373
T2 1247-1252 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T3 1254-1269 Body_part denotes skeletal muscle http://purl.obolibrary.org/obo/MAT_0000302
T4 1275-1281 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132
T5 1310-1315 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097

sentences

Id Subject Object Predicate Lexical cue
T1 0-94 Sentence denotes Expression cloning and functional characterization of human cDNA for ganglioside GM3 synthase.
T2 95-204 Sentence denotes Ganglioside GM3 is a major glycosphingolipid in the plasma membrane and is widely distributed in vertebrates.
T3 205-314 Sentence denotes We describe here the isolation of a human cDNA whose protein product is responsible for the synthesis of GM3.
T4 315-466 Sentence denotes The cloned cDNA spanned 2,359 base pairs, with an open reading frame encoding a protein of 362 amino acids with a predicted molecular mass of 41.7 kDa.
T5 467-671 Sentence denotes The deduced primary structure shows features characteristic of the sialyltransferase family, including a type II transmembrane topology and the sialylmotifs L at the center and S at the C-terminal region.
T6 672-839 Sentence denotes An amino acid substitution from aspartic acid to histidine was demonstrated at a position invariant in sialylmotif L of all the other sialyltransferases so far cloned.
T7 840-1059 Sentence denotes The best acceptor substrate for the gene product was lactosylceramide, and cells transfected with the cloned cDNA clearly exhibited de novo synthesis of GM3, with a measurable decrease in the precursor lactosylceramide.
T8 1060-1316 Sentence denotes Despite the ubiquitous distribution of ganglioside GM3 in human tissues, a major 2.4-kilobase transcript of the gene was found in a tissue-specific manner, with predominant expression in brain, skeletal muscle, and testis, and very low expression in liver.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-94 Sentence denotes Expression cloning and functional characterization of human cDNA for ganglioside GM3 synthase.
T2 95-204 Sentence denotes Ganglioside GM3 is a major glycosphingolipid in the plasma membrane and is widely distributed in vertebrates.
T3 205-314 Sentence denotes We describe here the isolation of a human cDNA whose protein product is responsible for the synthesis of GM3.
T4 315-466 Sentence denotes The cloned cDNA spanned 2,359 base pairs, with an open reading frame encoding a protein of 362 amino acids with a predicted molecular mass of 41.7 kDa.
T5 467-671 Sentence denotes The deduced primary structure shows features characteristic of the sialyltransferase family, including a type II transmembrane topology and the sialylmotifs L at the center and S at the C-terminal region.
T6 672-839 Sentence denotes An amino acid substitution from aspartic acid to histidine was demonstrated at a position invariant in sialylmotif L of all the other sialyltransferases so far cloned.
T7 840-1059 Sentence denotes The best acceptor substrate for the gene product was lactosylceramide, and cells transfected with the cloned cDNA clearly exhibited de novo synthesis of GM3, with a measurable decrease in the precursor lactosylceramide.
T8 1060-1316 Sentence denotes Despite the ubiquitous distribution of ganglioside GM3 in human tissues, a major 2.4-kilobase transcript of the gene was found in a tissue-specific manner, with predominant expression in brain, skeletal muscle, and testis, and very low expression in liver.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 81-84 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T2 107-110 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T3 310-313 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T4 893-909 Glycan denotes lactosylceramide https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T5 993-996 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T6 1042-1058 Glycan denotes lactosylceramide https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW
T7 1111-1114 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 893-909 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes lactosylceramide http://www.glycoepitope.jp/epitopes/EP0078
T2 1042-1058 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes lactosylceramide http://www.glycoepitope.jp/epitopes/EP0078

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 54-59 OrganismTaxon denotes human 9606
T2 241-246 OrganismTaxon denotes human 9606
T3 1118-1123 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 147-162 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T2 580-593 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T3 1192-1198 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T4 1247-1252 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T6 1254-1269 Body_part denotes skeletal muscle http://purl.obolibrary.org/obo/UBERON_0001134|http://purl.obolibrary.org/obo/UBERON_0014892|http://purl.obolibrary.org/obo/UBERON_0014895
T9 1275-1281 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T10 1310-1315 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 192-203 Body_part denotes vertebrates http://purl.obolibrary.org/obo/MAT_0000373
T2 1247-1252 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T3 1254-1269 Body_part denotes skeletal muscle http://purl.obolibrary.org/obo/MAT_0000302
T4 1275-1281 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132
T5 1310-1315 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097