PubMed:9792861
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/9792861","sourcedb":"PubMed","sourceid":"9792861","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/9792861","text":"Founder BRCA1 and BRCA2 mutations in French Canadian breast and ovarian cancer families.\nWe have identified four mutations in each of the breast cancer-susceptibility genes, BRCA1 and BRCA2, in French Canadian breast cancer and breast/ovarian cancer families from Quebec. To identify founder effects, we examined independently ascertained French Canadian cancer families for the distribution of these eight mutations. Mutations were found in 41 of 97 families. Six of eight mutations were observed at least twice. The BRCA1 C4446T mutation was the most common mutation found, followed by the BRCA2 8765delAG mutation. Together, these mutations were found in 28 of 41 families identified to have a mutation. The odds of detection of any of the four BRCA1 mutations was 18.7x greater if one or more cases of ovarian cancer were also present in the family. The odds of detection of any of the four BRCA2 mutations was 5.3x greater if there were at least five cases of breast cancer in the family. Interestingly, the presence of a breast cancer case \u003c36 years of age was strongly predictive of the presence of any of the eight mutations screened. Carriers of the same mutation, from different families, shared similar haplotypes, indicating that the mutant alleles were likely to be identical by descent for a mutation in the founder population. The identification of common BRCA1 and BRCA2 mutations will facilitate carrier detection in French Canadian breast cancer and breast/ovarian cancer families.","tracks":[{"project":"NCBIDiseaseCorpus","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"Modifier:D061325"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier:D001943"},{"id":"T3","span":{"begin":210,"end":223},"obj":"Modifier:D001943"},{"id":"T4","span":{"begin":228,"end":249},"obj":"Modifier:D061325"},{"id":"T5","span":{"begin":355,"end":361},"obj":"Modifier:D009369"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease:D010051"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease:D001943"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"Modifier:D001943"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"Modifier:D001943"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"Modifier:D061325"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T2","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T3","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T4","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T5","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T6","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T7","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T8","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T9","pred":"source","obj":"NCBIDiseaseCorpus"},{"subj":"T10","pred":"source","obj":"NCBIDiseaseCorpus"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":8,"end":13},"obj":"gene:672"},{"id":"T1","span":{"begin":64,"end":78},"obj":"disease:C0029925"},{"id":"T2","span":{"begin":8,"end":13},"obj":"gene:672"},{"id":"T3","span":{"begin":64,"end":78},"obj":"disease:C1140680"},{"id":"T4","span":{"begin":18,"end":23},"obj":"gene:675"},{"id":"T5","span":{"begin":64,"end":78},"obj":"disease:C0029925"},{"id":"T6","span":{"begin":18,"end":23},"obj":"gene:675"},{"id":"T7","span":{"begin":64,"end":78},"obj":"disease:C1140680"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"},{"subj":"T4","pred":"source","obj":"DisGeNET"},{"subj":"T5","pred":"source","obj":"DisGeNET"},{"subj":"T6","pred":"source","obj":"DisGeNET"},{"subj":"T7","pred":"source","obj":"DisGeNET"}]},{"project":"NCBI-Disease-Test","denotations":[{"id":"T154","span":{"begin":53,"end":78},"obj":"Modifier"},{"id":"T155","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T156","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T157","span":{"begin":228,"end":249},"obj":"Modifier"},{"id":"T158","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T159","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T160","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T161","span":{"begin":1027,"end":1040},"obj":"Modifier"},{"id":"T162","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T163","span":{"begin":1468,"end":1489},"obj":"Modifier"}],"attributes":[{"id":"A154","pred":"database_id","subj":"T154","obj":"D061325"},{"id":"A155","pred":"database_id","subj":"T155","obj":"D001943"},{"id":"A156","pred":"database_id","subj":"T156","obj":"D001943"},{"id":"A157","pred":"database_id","subj":"T157","obj":"D061325"},{"id":"A158","pred":"database_id","subj":"T158","obj":"D009369"},{"id":"A159","pred":"database_id","subj":"T159","obj":"D010051"},{"id":"A160","pred":"database_id","subj":"T160","obj":"D001943"},{"id":"A161","pred":"database_id","subj":"T161","obj":"D001943"},{"id":"A162","pred":"database_id","subj":"T162","obj":"D001943"},{"id":"A163","pred":"database_id","subj":"T163","obj":"D061325"},{"subj":"T154","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T155","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T156","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T157","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T158","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T159","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T160","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T161","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T162","pred":"source","obj":"NCBI-Disease-Test"},{"subj":"T163","pred":"source","obj":"NCBI-Disease-Test"}]},{"project":"NCBI-Disease-Test-Assistant-Knowledge","denotations":[{"id":"T1","span":{"begin":8,"end":13},"obj":"SpecificDisease"},{"id":"T2","span":{"begin":18,"end":23},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T4","span":{"begin":138,"end":151},"obj":"SpecificDisease"},{"id":"T5","span":{"begin":174,"end":179},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":184,"end":189},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":210,"end":223},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T9","span":{"begin":355,"end":361},"obj":"DiseaseClass"},{"id":"T10","span":{"begin":518,"end":539},"obj":"SpecificDisease"},{"id":"T11","span":{"begin":592,"end":616},"obj":"SpecificDisease"},{"id":"T12","span":{"begin":748,"end":763},"obj":"SpecificDisease"},{"id":"T13","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T14","span":{"begin":895,"end":910},"obj":"SpecificDisease"},{"id":"T15","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T16","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T17","span":{"begin":1371,"end":1376},"obj":"SpecificDisease"},{"id":"T18","span":{"begin":1381,"end":1386},"obj":"SpecificDisease"},{"id":"T19","span":{"begin":1450,"end":1463},"obj":"SpecificDisease"},{"id":"T20","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T11","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T12","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T13","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T14","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T15","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T16","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T17","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T18","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T19","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"},{"subj":"T20","pred":"source","obj":"NCBI-Disease-Test-Assistant-Knowledge"}]},{"project":"NCBI-Disease-Test-4o-NoGuidelineInPrompt","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":138,"end":166},"obj":"DiseaseClass"},{"id":"T3","span":{"begin":210,"end":223},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T5","span":{"begin":355,"end":361},"obj":"DiseaseClass"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Test-4o-NoGuidelineInPrompt"}]},{"project":"NCBI-Disease-Test-4o-GuidelineInPrompt","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"Modifier"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T3","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T4","span":{"begin":228,"end":249},"obj":"Modifier"},{"id":"T5","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"Modifier"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Test-4o-GuidelineInPrompt"}]},{"project":"NCBI-Disease-Corpus-UpdatedGuideline","denotations":[{"id":"T1","span":{"begin":8,"end":33},"obj":"CompositeMention"},{"id":"T2","span":{"begin":53,"end":87},"obj":"CompositeMention"},{"id":"T3","span":{"begin":138,"end":172},"obj":"DiseaseClass"},{"id":"T4","span":{"begin":174,"end":179},"obj":"SpecificDisease"},{"id":"T5","span":{"begin":184,"end":189},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":210,"end":223},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":228,"end":258},"obj":"CompositeMention"},{"id":"T8","span":{"begin":355,"end":370},"obj":"DiseaseClass"},{"id":"T9","span":{"begin":518,"end":539},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":592,"end":616},"obj":"SpecificDisease"},{"id":"T11","span":{"begin":748,"end":763},"obj":"SpecificDisease"},{"id":"T12","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T13","span":{"begin":895,"end":910},"obj":"SpecificDisease"},{"id":"T14","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T15","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T16","span":{"begin":1371,"end":1396},"obj":"CompositeMention"},{"id":"T17","span":{"begin":1450,"end":1463},"obj":"SpecificDisease"},{"id":"T18","span":{"begin":1468,"end":1498},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T11","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T12","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T13","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T14","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T15","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T16","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T17","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"},{"subj":"T18","pred":"source","obj":"NCBI-Disease-Corpus-UpdatedGuideline"}]},{"project":"NCBI-Disease-Corpus-humanintheloop","denotations":[{"id":"T1","span":{"begin":53,"end":1463},"obj":"Modifier"},{"id":"T2","span":{"begin":1475,"end":1489},"obj":"Modifier"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-humanintheloop"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-humanintheloop"}]},{"project":"NCBI-Disease-Corpus-rezarta1","denotations":[{"id":"T1","span":{"begin":53,"end":1463},"obj":"SpecificDisease"},{"id":"T2","span":{"begin":1475,"end":1489},"obj":"SpecificDisease"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-rezarta1"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-rezarta1"}]},{"project":"NCBI-Disease-Corpus-All","denotations":[{"id":"T154","span":{"begin":53,"end":78},"obj":"Modifier"},{"id":"T155","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T156","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T157","span":{"begin":228,"end":249},"obj":"Modifier"},{"id":"T158","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T159","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T160","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T161","span":{"begin":1027,"end":1040},"obj":"Modifier"},{"id":"T162","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T163","span":{"begin":1468,"end":1489},"obj":"Modifier"}],"attributes":[{"id":"A154","pred":"database_id","subj":"T154","obj":"D061325"},{"id":"A155","pred":"database_id","subj":"T155","obj":"D001943"},{"id":"A156","pred":"database_id","subj":"T156","obj":"D001943"},{"id":"A157","pred":"database_id","subj":"T157","obj":"D061325"},{"id":"A158","pred":"database_id","subj":"T158","obj":"D009369"},{"id":"A159","pred":"database_id","subj":"T159","obj":"D010051"},{"id":"A160","pred":"database_id","subj":"T160","obj":"D001943"},{"id":"A161","pred":"database_id","subj":"T161","obj":"D001943"},{"id":"A162","pred":"database_id","subj":"T162","obj":"D001943"},{"id":"A163","pred":"database_id","subj":"T163","obj":"D061325"},{"subj":"T154","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T155","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T156","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T157","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T158","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T159","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T160","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T161","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T162","pred":"source","obj":"NCBI-Disease-Corpus-All"},{"subj":"T163","pred":"source","obj":"NCBI-Disease-Corpus-All"}]},{"project":"NCBI-Disease-Corpus-2stage-All","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"Modifier"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T3","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T4","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T5","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-2stage-All"}]},{"project":"NCBI-Disease-Corpus-rezarta-All","denotations":[{"id":"T1","span":{"begin":53,"end":1463},"obj":"Modifier"},{"id":"T2","span":{"begin":1475,"end":1489},"obj":"Modifier"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-rezarta-All"}]},{"project":"NCBI-Disease-Corpus-4oGuideline-All","denotations":[{"id":"T1","span":{"begin":8,"end":33},"obj":"DiseaseClass"},{"id":"T2","span":{"begin":37,"end":78},"obj":"Modifier"},{"id":"T3","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T4","span":{"begin":194,"end":223},"obj":"Modifier"},{"id":"T5","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T6","span":{"begin":339,"end":361},"obj":"Modifier"},{"id":"T7","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":1434,"end":1463},"obj":"Modifier"},{"id":"T11","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"},{"subj":"T11","pred":"source","obj":"NCBI-Disease-Corpus-4oGuideline-All"}]},{"project":"NCBI-Disease-Corpus-Simple-All","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":138,"end":151},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":210,"end":223},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T5","span":{"begin":355,"end":361},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-Simple-All"}]},{"project":"NCBI-Disease-Corpus-o3-2","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T3","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T4","span":{"begin":806,"end":820},"obj":"Modifier"},{"id":"T5","span":{"begin":965,"end":978},"obj":"Modifier"},{"id":"T6","span":{"begin":1027,"end":1040},"obj":"Modifier"},{"id":"T7","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T8","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-o3-2"}]},{"project":"NCBI-Disease-Corpus-high-o3-1","denotations":[{"id":"T1","span":{"begin":64,"end":78},"obj":"Modifier"},{"id":"T2","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T3","span":{"begin":228,"end":249},"obj":"Modifier"},{"id":"T4","span":{"begin":806,"end":820},"obj":"Modifier"},{"id":"T5","span":{"begin":965,"end":978},"obj":"Modifier"},{"id":"T6","span":{"begin":1027,"end":1040},"obj":"Modifier"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-1"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-1"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-1"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-1"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-1"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-1"}]},{"project":"NCBI-Disease-Corpus-high-o3-2","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T3","span":{"begin":210,"end":223},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T5","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1450,"end":1463},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-high-o3-2"}]},{"project":"12345","denotations":[{"id":"T1","span":{"begin":53,"end":223},"obj":"DiseaseClass"},{"id":"T2","span":{"begin":235,"end":249},"obj":"DiseaseClass"},{"id":"T4","span":{"begin":1450,"end":1463},"obj":"DiseaseClass"},{"id":"T5","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"12345"},{"subj":"T2","pred":"source","obj":"12345"},{"subj":"T4","pred":"source","obj":"12345"},{"subj":"T5","pred":"source","obj":"12345"}]},{"project":"123456","denotations":[{"id":"T1","span":{"begin":53,"end":223},"obj":"Modifier"},{"id":"T2","span":{"begin":235,"end":249},"obj":"Modifier"},{"id":"T4","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T5","span":{"begin":1468,"end":1489},"obj":"Modifier"}],"attributes":[{"subj":"T1","pred":"source","obj":"123456"},{"subj":"T2","pred":"source","obj":"123456"},{"subj":"T4","pred":"source","obj":"123456"},{"subj":"T5","pred":"source","obj":"123456"}]},{"project":"NCBI-Disease-Corpus-GPT5-withguidelines","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"Modifier"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T3","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T4","span":{"begin":228,"end":249},"obj":"Modifier"},{"id":"T5","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"Modifier"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"Modifier"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-withguidelines"}]},{"project":"NCBI-Disease-Corpus-GPT5-noguidelines","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":138,"end":151},"obj":"SpecificDisease"},{"id":"T3","span":{"begin":210,"end":223},"obj":"SpecificDisease"},{"id":"T4","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T5","span":{"begin":355,"end":361},"obj":"DiseaseClass"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"SpecificDisease"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"SpecificDisease"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-noguidelines"}]},{"project":"NCBI-Disease-Corpus-GPT5-guidelineprompt","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T3","span":{"begin":210,"end":249},"obj":"CompositeMention"},{"id":"T4","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T5","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T6","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":1027,"end":1040},"obj":"Modifier"},{"id":"T8","span":{"begin":1450,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-GPT5-guidelineprompt"}]},{"project":"NCBI-Disease-Corpus-Moderated1","denotations":[{"id":"T1","span":{"begin":53,"end":78},"obj":"CompositeMention"},{"id":"T2","span":{"begin":138,"end":151},"obj":"Modifier"},{"id":"T3","span":{"begin":210,"end":223},"obj":"Modifier"},{"id":"T4","span":{"begin":228,"end":249},"obj":"CompositeMention"},{"id":"T5","span":{"begin":355,"end":361},"obj":"Modifier"},{"id":"T6","span":{"begin":806,"end":820},"obj":"SpecificDisease"},{"id":"T7","span":{"begin":965,"end":978},"obj":"SpecificDisease"},{"id":"T8","span":{"begin":1027,"end":1040},"obj":"Modifier"},{"id":"T9","span":{"begin":1450,"end":1463},"obj":"Modifier"},{"id":"T10","span":{"begin":1468,"end":1489},"obj":"CompositeMention"}],"attributes":[{"subj":"T1","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T2","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T3","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T4","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T5","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T6","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T7","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T8","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T9","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"},{"subj":"T10","pred":"source","obj":"NCBI-Disease-Corpus-Moderated1"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"NCBIDiseaseCorpus","color":"#95ec93","default":true},{"id":"DisGeNET","color":"#ec93af"},{"id":"NCBI-Disease-Test","color":"#93c9ec"},{"id":"NCBI-Disease-Test-Assistant-Knowledge","color":"#e3ec93"},{"id":"NCBI-Disease-Test-4o-NoGuidelineInPrompt","color":"#db93ec"},{"id":"NCBI-Disease-Test-4o-GuidelineInPrompt","color":"#93ecc1"},{"id":"NCBI-Disease-Corpus-UpdatedGuideline","color":"#eca793"},{"id":"NCBI-Disease-Corpus-humanintheloop","color":"#9398ec"},{"id":"NCBI-Disease-Corpus-rezarta1","color":"#b2ec93"},{"id":"NCBI-Disease-Corpus-All","color":"#ec93cc"},{"id":"NCBI-Disease-Corpus-2stage-All","color":"#93e7ec"},{"id":"NCBI-Disease-Corpus-rezarta-All","color":"#ecd793"},{"id":"NCBI-Disease-Corpus-4oGuideline-All","color":"#bd93ec"},{"id":"NCBI-Disease-Corpus-Simple-All","color":"#93eca3"},{"id":"NCBI-Disease-Corpus-o3-2","color":"#ec939c"},{"id":"NCBI-Disease-Corpus-high-o3-1","color":"#93b6ec"},{"id":"NCBI-Disease-Corpus-high-o3-2","color":"#d0ec93"},{"id":"12345","color":"#ec93ea"},{"id":"123456","color":"#93ecd3"},{"id":"NCBI-Disease-Corpus-GPT5-withguidelines","color":"#ecb993"},{"id":"NCBI-Disease-Corpus-GPT5-noguidelines","color":"#9f93ec"},{"id":"NCBI-Disease-Corpus-GPT5-guidelineprompt","color":"#a0ec93"},{"id":"NCBI-Disease-Corpus-Moderated1","color":"#ec93ba"}]}]}}