PubMed:9731533
Annnotations
NCBI-Disease-Corpus-GPT5-withguidelines
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | Modifier | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease | denotes | FAP |
| T4 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder |
| T5 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T6 | 335-338 | SpecificDisease | denotes | CRC |
| T7 | 401-408 | DiseaseClass | denotes | tumours |
| T8 | 740-743 | SpecificDisease | denotes | CRC |
| T9 | 788-794 | DiseaseClass | denotes | cancer |
| T10 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
NCBI-Disease-Corpus-GPT5-noguidelines
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T3 | 234-260 | DiseaseClass | denotes | multiple intestinal polyps |
| T4 | 316-339 | SpecificDisease | denotes | colorectal cancer (CRC) |
| T5 | 401-408 | DiseaseClass | denotes | tumours |
| T6 | 740-743 | SpecificDisease | denotes | CRC |
| T7 | 788-794 | DiseaseClass | denotes | cancer |
| T8 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
NCBI-Disease-Corpus-GPT5-guidelineprompt
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | Modifier | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease | denotes | FAP |
| T4 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder |
| T5 | 243-260 | DiseaseClass | denotes | intestinal polyps |
| T6 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T7 | 335-338 | SpecificDisease | denotes | CRC |
| T8 | 401-408 | DiseaseClass | denotes | tumours |
| T9 | 740-743 | Modifier | denotes | CRC |
| T10 | 788-794 | DiseaseClass | denotes | cancer |
| T11 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
NCBI-Disease-Corpus-Moderated1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | Modifier | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease | denotes | FAP |
| T4 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder |
| T5 | 243-260 | SpecificDisease | denotes | intestinal polyps |
| T6 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T7 | 335-338 | SpecificDisease | denotes | CRC |
| T8 | 401-408 | SpecificDisease | denotes | tumours |
| T9 | 740-743 | SpecificDisease | denotes | CRC |
| T10 | 788-794 | SpecificDisease | denotes | cancer |
| T11 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 96-99 | gene:5624 | denotes | APC |
| T1 | 132-162 | disease:C0032580 | denotes | familial adenomatous polyposis |
| T2 | 96-99 | gene:324 | denotes | APC |
| T3 | 132-162 | disease:C0032580 | denotes | familial adenomatous polyposis |
| T4 | 96-99 | gene:5624 | denotes | APC |
| T5 | 164-167 | disease:C0032580 | denotes | FAP |
| T6 | 96-99 | gene:324 | denotes | APC |
| T7 | 164-167 | disease:C0032580 | denotes | FAP |
| T8 | 96-99 | gene:5624 | denotes | APC |
| T9 | 243-260 | disease:C0021846 | denotes | intestinal polyps |
| T10 | 96-99 | gene:324 | denotes | APC |
| T11 | 243-260 | disease:C0021846 | denotes | intestinal polyps |
| T12 | 96-99 | gene:5624 | denotes | APC |
| T13 | 316-333 | disease:C0009402 | denotes | colorectal cancer |
| T14 | 96-99 | gene:5624 | denotes | APC |
| T15 | 316-333 | disease:C1527249 | denotes | colorectal cancer |
| T16 | 96-99 | gene:324 | denotes | APC |
| T17 | 316-333 | disease:C0009402 | denotes | colorectal cancer |
| T18 | 96-99 | gene:324 | denotes | APC |
| T19 | 316-333 | disease:C1527249 | denotes | colorectal cancer |
| T20 | 96-99 | gene:5624 | denotes | APC |
| T21 | 335-338 | disease:C0009402 | denotes | CRC |
| T22 | 96-99 | gene:5624 | denotes | APC |
| T23 | 335-338 | disease:C1527249 | denotes | CRC |
| T24 | 96-99 | gene:324 | denotes | APC |
| T25 | 335-338 | disease:C0009402 | denotes | CRC |
| T26 | 96-99 | gene:324 | denotes | APC |
| T27 | 335-338 | disease:C1527249 | denotes | CRC |
| R1 | T0 | T1 | associated_with | APC,familial adenomatous polyposis |
| R2 | T2 | T3 | associated_with | APC,familial adenomatous polyposis |
| R3 | T4 | T5 | associated_with | APC,FAP |
| R4 | T6 | T7 | associated_with | APC,FAP |
| R5 | T8 | T9 | associated_with | APC,intestinal polyps |
| R6 | T10 | T11 | associated_with | APC,intestinal polyps |
| R7 | T12 | T13 | associated_with | APC,colorectal cancer |
| R8 | T14 | T15 | associated_with | APC,colorectal cancer |
| R9 | T16 | T17 | associated_with | APC,colorectal cancer |
| R10 | T18 | T19 | associated_with | APC,colorectal cancer |
| R11 | T20 | T21 | associated_with | APC,CRC |
| R12 | T22 | T23 | associated_with | APC,CRC |
| R13 | T24 | T25 | associated_with | APC,CRC |
| R14 | T26 | T27 | associated_with | APC,CRC |
DisGeNET5_variant_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 9731533-4#4#10#geners1801155 | 605-611 | geners1801155 | denotes | I1307K |
| 9731533-4#139#142#diseaseC0009402 | 740-743 | diseaseC0009402 | denotes | CRC |
| 9731533-4#139#142#diseaseC1527249 | 740-743 | diseaseC1527249 | denotes | CRC |
| 4#10#geners1801155139#142#diseaseC0009402 | 9731533-4#4#10#geners1801155 | 9731533-4#139#142#diseaseC0009402 | associated_with | I1307K,CRC |
| 4#10#geners1801155139#142#diseaseC1527249 | 9731533-4#4#10#geners1801155 | 9731533-4#139#142#diseaseC1527249 | associated_with | I1307K,CRC |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 9731533-1#13#16#gene324 | 96-99 | gene324 | denotes | APC |
| 9731533-1#49#79#diseaseC0032580 | 132-162 | diseaseC0032580 | denotes | familial adenomatous polyposis |
| 9731533-1#81#84#diseaseC0032580 | 164-167 | diseaseC0032580 | denotes | FAP |
| 9731533-1#106#133#diseaseC3899989 | 189-216 | diseaseC3899989 | denotes | autosomal dominant disorder |
| 9731533-1#151#177#diseaseC1257915 | 234-260 | diseaseC1257915 | denotes | multiple intestinal polyps |
| 13#16#gene32449#79#diseaseC0032580 | 9731533-1#13#16#gene324 | 9731533-1#49#79#diseaseC0032580 | associated_with | APC,familial adenomatous polyposis |
| 13#16#gene32481#84#diseaseC0032580 | 9731533-1#13#16#gene324 | 9731533-1#81#84#diseaseC0032580 | associated_with | APC,FAP |
| 13#16#gene324106#133#diseaseC3899989 | 9731533-1#13#16#gene324 | 9731533-1#106#133#diseaseC3899989 | associated_with | APC,autosomal dominant disorder |
| 13#16#gene324151#177#diseaseC1257915 | 9731533-1#13#16#gene324 | 9731533-1#151#177#diseaseC1257915 | associated_with | APC,multiple intestinal polyps |
NCBIDiseaseCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | Modifier:D009369 | denotes | cancer |
| T2 | 132-162 | SpecificDisease:D011125 | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease:D011125 | denotes | FAP |
| T4 | 189-216 | DiseaseClass:D030342 | denotes | autosomal dominant disorder |
| T5 | 254-260 | DiseaseClass:D011127 | denotes | polyps |
| T6 | 316-333 | SpecificDisease:D015179 | denotes | colorectal cancer |
| T7 | 335-338 | SpecificDisease:D015179 | denotes | CRC |
| T8 | 341-344 | SpecificDisease:D011125 | denotes | APC |
| T9 | 401-408 | DiseaseClass:D009369 | denotes | tumours |
| T10 | 740-743 | SpecificDisease:D015179 | denotes | CRC |
| T11 | 788-794 | DiseaseClass:D009369 | denotes | cancer |
| T12 | 878-914 | CompositeMention:D001943|D015179|D009369 | denotes | colorectal, breast and other cancers |
NCBI-Disease-Test
| Id | Subject | Object | Predicate | Lexical cue | database_id |
|---|---|---|---|---|---|
| T694 | 25-31 | Modifier | denotes | cancer | D009369 |
| T695 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis | D011125 |
| T696 | 164-167 | SpecificDisease | denotes | FAP | D011125 |
| T697 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder | D030342 |
| T698 | 254-260 | DiseaseClass | denotes | polyps | D011127 |
| T699 | 316-333 | SpecificDisease | denotes | colorectal cancer | D015179 |
| T700 | 335-338 | SpecificDisease | denotes | CRC | D015179 |
| T701 | 341-344 | SpecificDisease | denotes | APC | D011125 |
| T702 | 401-408 | DiseaseClass | denotes | tumours | D009369 |
| T703 | 740-743 | SpecificDisease | denotes | CRC | D015179 |
| T704 | 788-794 | DiseaseClass | denotes | cancer | D009369 |
| T705 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers | D001943|D015179|D009369 |
NCBI-Disease-Test-Assistant-Knowledge
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T3 | 316-339 | SpecificDisease | denotes | colorectal cancer (CRC) |
| T4 | 740-743 | SpecificDisease | denotes | CRC |
| T5 | 788-794 | DiseaseClass | denotes | cancer |
| T6 | 878-888 | SpecificDisease | denotes | colorectal |
| T7 | 890-896 | SpecificDisease | denotes | breast |
| T8 | 907-914 | DiseaseClass | denotes | cancers |
NCBI-Disease-Test-4o-NoGuidelineInPrompt
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T3 | 316-339 | SpecificDisease | denotes | colorectal cancer (CRC) |
| T4 | 740-743 | SpecificDisease | denotes | CRC |
| T5 | 788-794 | DiseaseClass | denotes | cancer |
| T6 | 878-888 | SpecificDisease | denotes | colorectal |
| T7 | 890-896 | SpecificDisease | denotes | breast |
| T8 | 901-914 | DiseaseClass | denotes | other cancers |
NCBI-Disease-Corpus-o3-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T2 | 316-339 | SpecificDisease | denotes | colorectal cancer (CRC) |
| T3 | 740-743 | SpecificDisease | denotes | CRC |
| T4 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
NCBI-Disease-Corpus-high-o3-1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease | denotes | FAP |
| T4 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T5 | 335-338 | SpecificDisease | denotes | CRC |
| T6 | 740-743 | SpecificDisease | denotes | CRC |
| T7 | 788-794 | DiseaseClass | denotes | cancer |
| T8 | 878-888 | SpecificDisease | denotes | colorectal |
| T9 | 890-896 | SpecificDisease | denotes | breast |
| T10 | 901-914 | DiseaseClass | denotes | other cancers |
NCBI-Disease-Corpus-high-o3-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T2 | 164-167 | SpecificDisease | denotes | FAP |
| T3 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T4 | 335-338 | SpecificDisease | denotes | CRC |
| T5 | 740-743 | SpecificDisease | denotes | CRC |
| T6 | 878-888 | SpecificDisease | denotes | colorectal |
| T7 | 890-896 | SpecificDisease | denotes | breast |
| T8 | 901-914 | DiseaseClass | denotes | other cancers |
NCBI-Disease-Test-4o-GuidelineInPrompt
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-20 | Modifier | denotes | APCI1307K allele |
| T2 | 25-31 | DiseaseClass | denotes | cancer |
| T3 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T4 | 316-339 | SpecificDisease | denotes | colorectal cancer (CRC) |
| T5 | 463-480 | Modifier | denotes | APC I1307K allele |
| T6 | 605-618 | Modifier | denotes | I1307K allele |
| T7 | 740-743 | SpecificDisease | denotes | CRC |
| T8 | 778-784 | Modifier | denotes | I1307K |
| T9 | 788-794 | DiseaseClass | denotes | cancer |
| T10 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
| T11 | 947-962 | Modifier | denotes | I1307K carriers |
NCBI-Disease-Corpus-UpdatedGuideline
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease | denotes | FAP |
| T4 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder |
| T5 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T6 | 335-338 | SpecificDisease | denotes | CRC |
| T7 | 740-743 | SpecificDisease | denotes | CRC |
| T8 | 788-794 | DiseaseClass | denotes | cancer |
| T9 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
NCBI-Disease-Corpus-humanintheloop
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T2 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T3 | 335-338 | SpecificDisease | denotes | CRC |
| T4 | 740-743 | SpecificDisease | denotes | CRC |
| T5 | 878-888 | SpecificDisease | denotes | colorectal |
| T6 | 890-896 | SpecificDisease | denotes | breast |
NCBI-Disease-Corpus-rezarta1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T4 | 740-743 | SpecificDisease | denotes | CRC |
| T5 | 788-794 | DiseaseClass | denotes | cancer |
| T6 | 878-888 | SpecificDisease | denotes | colorectal |
| T7 | 890-896 | SpecificDisease | denotes | breast |
| T8 | 907-914 | DiseaseClass | denotes | cancers |
NCBI-Disease-Corpus-All
| Id | Subject | Object | Predicate | Lexical cue | database_id |
|---|---|---|---|---|---|
| T694 | 25-31 | Modifier | denotes | cancer | D009369 |
| T695 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis | D011125 |
| T696 | 164-167 | SpecificDisease | denotes | FAP | D011125 |
| T697 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder | D030342 |
| T698 | 254-260 | DiseaseClass | denotes | polyps | D011127 |
| T699 | 316-333 | SpecificDisease | denotes | colorectal cancer | D015179 |
| T700 | 335-338 | SpecificDisease | denotes | CRC | D015179 |
| T701 | 341-344 | SpecificDisease | denotes | APC | D011125 |
| T702 | 401-408 | DiseaseClass | denotes | tumours | D009369 |
| T703 | 740-743 | SpecificDisease | denotes | CRC | D015179 |
| T704 | 788-794 | DiseaseClass | denotes | cancer | D009369 |
| T705 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers | D001943|D015179|D009369 |
NCBI-Disease-Corpus-2stage-All
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T2 | 164-167 | SpecificDisease | denotes | FAP |
| T3 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T4 | 335-338 | SpecificDisease | denotes | CRC |
| T5 | 740-743 | SpecificDisease | denotes | CRC |
| T6 | 878-888 | CompositeMention | denotes | colorectal |
| T7 | 890-896 | CompositeMention | denotes | breast |
| T8 | 907-914 | DiseaseClass | denotes | cancers |
NCBI-Disease-Corpus-rezarta-All
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T2 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T3 | 740-743 | SpecificDisease | denotes | CRC |
| T4 | 788-794 | DiseaseClass | denotes | cancer |
| T5 | 878-888 | SpecificDisease | denotes | colorectal |
| T6 | 890-896 | SpecificDisease | denotes | breast |
| T7 | 907-914 | DiseaseClass | denotes | cancers |
NCBI-Disease-Corpus-4oGuideline-All
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 67-81 | Modifier | denotes | Ashkenazi Jews |
| T3 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T4 | 189-216 | DiseaseClass | denotes | autosomal dominant disorder |
| T5 | 316-339 | Modifier | denotes | colorectal cancer (CRC) |
| T6 | 740-743 | Modifier | denotes | CRC |
| T7 | 788-794 | DiseaseClass | denotes | cancer |
| T8 | 878-914 | CompositeMention | denotes | colorectal, breast and other cancers |
NCBI-Disease-Corpus-Simple-All
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-168 | SpecificDisease | denotes | familial adenomatous polyposis (FAP) |
| T3 | 316-339 | SpecificDisease | denotes | colorectal cancer (CRC) |
| T4 | 463-480 | CompositeMention | denotes | APC I1307K allele |
| T5 | 788-794 | DiseaseClass | denotes | cancer |
| T6 | 878-888 | SpecificDisease | denotes | colorectal |
| T7 | 890-896 | SpecificDisease | denotes | breast |
| T8 | 901-914 | DiseaseClass | denotes | other cancers |
123456
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T2 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T3 | 335-338 | SpecificDisease | denotes | CRC |
| T4 | 740-743 | SpecificDisease | denotes | CRC |
| T5 | 878-888 | SpecificDisease | denotes | colorectal |
| T6 | 890-896 | SpecificDisease | denotes | breast |
12345
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 25-31 | DiseaseClass | denotes | cancer |
| T2 | 132-162 | SpecificDisease | denotes | familial adenomatous polyposis |
| T3 | 164-167 | SpecificDisease | denotes | FAP |
| T4 | 316-333 | SpecificDisease | denotes | colorectal cancer |
| T5 | 335-338 | SpecificDisease | denotes | CRC |
| T6 | 740-743 | SpecificDisease | denotes | CRC |
| T7 | 788-794 | DiseaseClass | denotes | cancer |
| T10 | 907-914 | DiseaseClass | denotes | cancers |