PubMed:9714703
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-135 | Sentence | denotes | In vivo differentiation of mast cells from acute myeloid leukemia blasts carrying a novel activating ligand-independent C-kit mutation. |
| TextSentencer_T2 | 136-295 | Sentence | denotes | The primary role of protooncogene c-kit in mast cell differentiation is supported by the development of mast cells from CD34+/CD117+(c-kit) myeloid precursors. |
| TextSentencer_T3 | 296-502 | Sentence | denotes | Growth factor independence, neoplastic transformation and differentiation of mast cells were found in association with c-kit activating mutations in both murine and human mastocytoma and mast cell diseases. |
| TextSentencer_T4 | 503-704 | Sentence | denotes | We have identified a novel c-kit mutation (D816Y) in peripheral blood mononuclear cells from a patient with AML (M2), massive presence of mast cells in bone marrow and rapid progression of the disease. |
| TextSentencer_T5 | 705-964 | Sentence | denotes | The mutation, a G-->T transversion at nt 2467 of the c-kit gene resulting in Asp816-->Tyr substitution, corresponds to the D814Y and D817Y mutations identified and characterized in the murine P815 mastocytoma and the rat RBL-2H3 mast cell leukemia cell lines. |
| TextSentencer_T6 | 965-1132 | Sentence | denotes | The absence of SCF transcripts that we found by RTPCR in the patient's blasts indicates that, also in humans, this activating mutation leads to SCF independent growth. |
| TextSentencer_T7 | 1133-1287 | Sentence | denotes | The expression of the mutant allele on Kit signaling may be further enhanced by trisomy of chromosome 4 (carrying the c-kit gene) in the patient's blasts. |
| TextSentencer_T8 | 1288-1564 | Sentence | denotes | From these findings it is concluded that mast cells could be generated from a leukemic CD34/CD117-positive clone, that combines the antigenic expression of mast cell precursor to the growth and differentiation factor-independence which was derived by the c-kit D816Y mutation. |
| T1 | 0-135 | Sentence | denotes | In vivo differentiation of mast cells from acute myeloid leukemia blasts carrying a novel activating ligand-independent C-kit mutation. |
| T2 | 136-295 | Sentence | denotes | The primary role of protooncogene c-kit in mast cell differentiation is supported by the development of mast cells from CD34+/CD117+(c-kit) myeloid precursors. |
| T3 | 296-502 | Sentence | denotes | Growth factor independence, neoplastic transformation and differentiation of mast cells were found in association with c-kit activating mutations in both murine and human mastocytoma and mast cell diseases. |
| T4 | 503-704 | Sentence | denotes | We have identified a novel c-kit mutation (D816Y) in peripheral blood mononuclear cells from a patient with AML (M2), massive presence of mast cells in bone marrow and rapid progression of the disease. |
| T5 | 705-964 | Sentence | denotes | The mutation, a G-->T transversion at nt 2467 of the c-kit gene resulting in Asp816-->Tyr substitution, corresponds to the D814Y and D817Y mutations identified and characterized in the murine P815 mastocytoma and the rat RBL-2H3 mast cell leukemia cell lines. |
| T6 | 965-1132 | Sentence | denotes | The absence of SCF transcripts that we found by RTPCR in the patient's blasts indicates that, also in humans, this activating mutation leads to SCF independent growth. |
| T7 | 1133-1287 | Sentence | denotes | The expression of the mutant allele on Kit signaling may be further enhanced by trisomy of chromosome 4 (carrying the c-kit gene) in the patient's blasts. |
| T8 | 1288-1564 | Sentence | denotes | From these findings it is concluded that mast cells could be generated from a leukemic CD34/CD117-positive clone, that combines the antigenic expression of mast cell precursor to the growth and differentiation factor-independence which was derived by the c-kit D816Y mutation. |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 1251-1256 | gene:3815 | denotes | c-kit |
| T1 | 1213-1220 | disease:C0041107 | denotes | trisomy |
| R1 | T0 | T1 | associated_with | c-kit,trisomy |
PennBioIE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 120-125 | protein | denotes | C-kit |
| T2 | 170-175 | protein | denotes | c-kit |
| T3 | 256-260 | protein | denotes | CD34 |
| T4 | 262-267 | protein | denotes | CD117 |
| T5 | 269-274 | protein | denotes | c-kit |
| T6 | 296-309 | protein | denotes | Growth factor |
| T7 | 415-420 | protein | denotes | c-kit |
| T8 | 530-535 | protein | denotes | c-kit |
| T9 | 536-544 | protein | denotes | mutation |
| T10 | 546-547 | protein | denotes | D |
| T11 | 547-550 | protein | denotes | 816 |
| T12 | 550-551 | protein | denotes | Y |
| T13 | 709-717 | protein | denotes | mutation |
| T14 | 721-722 | protein | denotes | G |
| T15 | 725-726 | protein | denotes | T |
| T16 | 727-739 | protein | denotes | transversion |
| T17 | 743-750 | protein | denotes | nt 2467 |
| T18 | 758-763 | protein | denotes | c-kit |
| T19 | 782-785 | protein | denotes | Asp |
| T20 | 785-788 | protein | denotes | 816 |
| T21 | 791-794 | protein | denotes | Tyr |
| T22 | 795-807 | protein | denotes | substitution |
| T23 | 828-829 | protein | denotes | D |
| T24 | 829-832 | protein | denotes | 814 |
| T25 | 832-833 | protein | denotes | Y |
| T26 | 838-839 | protein | denotes | D |
| T27 | 839-842 | protein | denotes | 817 |
| T28 | 842-843 | protein | denotes | Y |
| T29 | 844-853 | protein | denotes | mutations |
| T30 | 980-983 | protein | denotes | SCF |
| T31 | 1091-1099 | protein | denotes | mutation |
| T32 | 1109-1112 | protein | denotes | SCF |
| T33 | 1172-1175 | protein | denotes | Kit |
| T34 | 1213-1220 | protein | denotes | trisomy |
| T35 | 1224-1236 | protein | denotes | chromosome 4 |
| T36 | 1251-1256 | protein | denotes | c-kit |
| T37 | 1375-1379 | protein | denotes | CD34 |
| T38 | 1380-1385 | protein | denotes | CD117 |
| T39 | 1471-1504 | protein | denotes | growth and differentiation factor |
| T40 | 1543-1548 | protein | denotes | c-kit |
| T41 | 1549-1550 | protein | denotes | D |
| T42 | 1550-1553 | protein | denotes | 816 |
| T43 | 1553-1554 | protein | denotes | Y |
| T44 | 1555-1563 | protein | denotes | mutation |
DisGeNET5_variant_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 9714703-3#43#48#geners121913506 | 546-551 | geners121913506 | denotes | D816Y |
| 9714703-3#113#115#diseaseC0023467 | 616-618 | diseaseC0023467 | denotes | M2 |
| 9714703-4#133#138#geners121913506 | 838-843 | geners121913506 | denotes | D817Y |
| 9714703-4#197#208#diseaseC0024897 | 902-913 | diseaseC0024897 | denotes | mastocytoma |
| 9714703-4#197#208#diseaseC0334664 | 902-913 | diseaseC0334664 | denotes | mastocytoma |
| 9714703-4#197#208#diseaseC2242987 | 902-913 | diseaseC2242987 | denotes | mastocytoma |
| 9714703-4#229#247#diseaseC0023461 | 934-952 | diseaseC0023461 | denotes | mast cell leukemia |
| 43#48#geners121913506113#115#diseaseC0023467 | 9714703-3#43#48#geners121913506 | 9714703-3#113#115#diseaseC0023467 | associated_with | D816Y,M2 |
| 133#138#geners121913506197#208#diseaseC0024897 | 9714703-4#133#138#geners121913506 | 9714703-4#197#208#diseaseC0024897 | associated_with | D817Y,mastocytoma |
| 133#138#geners121913506197#208#diseaseC0334664 | 9714703-4#133#138#geners121913506 | 9714703-4#197#208#diseaseC0334664 | associated_with | D817Y,mastocytoma |
| 133#138#geners121913506197#208#diseaseC2242987 | 9714703-4#133#138#geners121913506 | 9714703-4#197#208#diseaseC2242987 | associated_with | D817Y,mastocytoma |
| 133#138#geners121913506229#247#diseaseC0023461 | 9714703-4#133#138#geners121913506 | 9714703-4#229#247#diseaseC0023461 | associated_with | D817Y,mast cell leukemia |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 9714703-6#118#123#gene3815 | 1251-1256 | gene3815 | denotes | c-kit |
| 9714703-6#80#87#diseaseC0041107 | 1213-1220 | diseaseC0041107 | denotes | trisomy |
| 118#123#gene381580#87#diseaseC0041107 | 9714703-6#118#123#gene3815 | 9714703-6#80#87#diseaseC0041107 | associated_with | c-kit,trisomy |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 567-572 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| PD-UBERON-AE-B_T2 | 655-666 | http://purl.obolibrary.org/obo/UBERON_0002371 | denotes | bone marrow |
PubCasesHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TI1 | 43-65 | HP:0004808 | denotes | acute myeloid leukemia |
| AB1 | 944-952 | HP:0001909 | denotes | leukemia |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 567-572 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| PD-UBERON-AE-B_T2 | 655-666 | http://purl.obolibrary.org/obo/UBERON_0002371 | denotes | bone marrow |
PubCasesORDO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| AB1 | 611-618 | ORDO:98834 | denotes | AML (M2 |