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PubMed:9472666 JSON TXT

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NCBI-Disease-Corpus-GPT5-withguidelines

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	DiseaseClass	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-GPT5-noguidelines

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	287-289	Modifier	denotes	no
T7	301-311	SpecificDisease	denotes	meningitis
T8	321-341	DiseaseClass	denotes	neisserial infection
T9	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-GPT5-guidelineprompt

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	DiseaseClass	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-Moderated1

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	DiseaseClass	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

sentences

Id	Subject	Object	Predicate	Lexical cue
TextSentencer_T1	0-100	Sentence	denotes	Molecular defects leading to human complement component C6 deficiency in an African-American family.
TextSentencer_T2	101-225	Sentence	denotes	Complement component C6 deficiency (C6D) was diagnosed in a 16-year-old African-American male with meningococcal meningitis.
TextSentencer_T3	226-342	Sentence	denotes	The patient's father and two brothers also had C6D, but gave no history of meningitis or other neisserial infection.
TextSentencer_T4	343-586	Sentence	denotes	By using exon-specific polymerase chain reaction (PCR)/single-strand conformation polymorphism as a screening step and nucleotide sequencing of target exons, we determined that the proband was a compound heterozygote for two C6 gene mutations.
TextSentencer_T5	587-769	Sentence	denotes	The first, 1195delC located in exon 7, is a novel mutation, while the second, 1936delG in exon 12, has been described before to cause C6D in an unrelated African-American individual.
TextSentencer_T6	770-844	Sentence	denotes	Both mutations result in premature termination codons and C6 null alleles.
TextSentencer_T7	845-1030	Sentence	denotes	Allele-specific PCR indicated that the proband's two brothers also inherited the 1195delC mutation from their heterozygous mother and the 1936delG mutation from their homozygous father.
T1	0-100	Sentence	denotes	Molecular defects leading to human complement component C6 deficiency in an African-American family.
T2	101-225	Sentence	denotes	Complement component C6 deficiency (C6D) was diagnosed in a 16-year-old African-American male with meningococcal meningitis.
T3	226-342	Sentence	denotes	The patient's father and two brothers also had C6D, but gave no history of meningitis or other neisserial infection.
T4	343-586	Sentence	denotes	By using exon-specific polymerase chain reaction (PCR)/single-strand conformation polymorphism as a screening step and nucleotide sequencing of target exons, we determined that the proband was a compound heterozygote for two C6 gene mutations.
T5	587-769	Sentence	denotes	The first, 1195delC located in exon 7, is a novel mutation, while the second, 1936delG in exon 12, has been described before to cause C6D in an unrelated African-American individual.
T6	770-844	Sentence	denotes	Both mutations result in premature termination codons and C6 null alleles.
T7	845-1030	Sentence	denotes	Allele-specific PCR indicated that the proband's two brothers also inherited the 1195delC mutation from their heterozygous mother and the 1936delG mutation from their homozygous father.

PubCasesHPO

Id	Subject	Object	Predicate	Lexical cue
AB1	214-224	HP:0001287	denotes	meningitis
AB2	301-311	HP:0001287	denotes	meningitis

PubCasesORDO

Id	Subject	Object	Predicate	Lexical cue
AB1	200-224	ORDO:33475	denotes	meningococcal meningitis

NCBIDiseaseCorpus

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease:OMIM:612446	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease:OMIM:612446	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease:OMIM:612446	denotes	C6D
T4	200-224	SpecificDisease:D008585	denotes	meningococcal meningitis
T5	273-276	SpecificDisease:OMIM:612446	denotes	C6D
T6	301-311	SpecificDisease:D008581	denotes	meningitis
T7	321-341	SpecificDisease:D016870	denotes	neisserial infection
T8	721-724	SpecificDisease:OMIM:612446	denotes	C6D

NCBI-Disease-Test

Id	Subject	Object	Predicate	Lexical cue	database_id
T278	35-69	SpecificDisease	denotes	complement component C6 deficiency	OMIM:612446
T279	101-135	SpecificDisease	denotes	Complement component C6 deficiency	OMIM:612446
T280	137-140	SpecificDisease	denotes	C6D	OMIM:612446
T281	200-224	SpecificDisease	denotes	meningococcal meningitis	D008585
T282	273-276	SpecificDisease	denotes	C6D	OMIM:612446
T283	301-311	SpecificDisease	denotes	meningitis	D008581
T284	321-341	SpecificDisease	denotes	neisserial infection	D016870
T285	721-724	SpecificDisease	denotes	C6D	OMIM:612446

NCBI-Disease-Test-Assistant-Knowledge

Id	Subject	Object	Predicate	Lexical cue
T1	122-141	SpecificDisease	denotes	C6 deficiency (C6D)
T2	200-224	SpecificDisease	denotes	meningococcal meningitis
T3	273-276	SpecificDisease	denotes	C6D
T4	301-311	SpecificDisease	denotes	meningitis
T5	321-341	DiseaseClass	denotes	neisserial infection
T6	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Test-4o-NoGuidelineInPrompt

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	122-141	SpecificDisease	denotes	C6 deficiency (C6D)
T3	200-224	SpecificDisease	denotes	meningococcal meningitis
T4	273-276	SpecificDisease	denotes	C6D
T5	301-311	SpecificDisease	denotes	meningitis
T6	321-341	DiseaseClass	denotes	neisserial infection
T7	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-o3-2

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	SpecificDisease	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-high-o3-1

Id	Subject	Object	Predicate	Lexical cue
T1	29-69	SpecificDisease	denotes	human complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	DiseaseClass	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-high-o3-2

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Test-4o-GuidelineInPrompt

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	122-135	SpecificDisease	denotes	C6 deficiency
T3	200-224	SpecificDisease	denotes	meningococcal meningitis
T4	273-276	SpecificDisease	denotes	C6D
T5	301-311	SpecificDisease	denotes	meningitis
T6	321-341	Modifier	denotes	neisserial infection
T7	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-UpdatedGuideline

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	DiseaseClass	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-humanintheloop

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	122-135	SpecificDisease	denotes	C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-rezarta1

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-141	SpecificDisease	denotes	Complement component C6 deficiency (C6D)
T3	200-224	SpecificDisease	denotes	meningococcal meningitis
T4	273-276	SpecificDisease	denotes	C6D
T5	301-311	SpecificDisease	denotes	meningitis
T6	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-All

Id	Subject	Object	Predicate	Lexical cue	database_id
T278	35-69	SpecificDisease	denotes	complement component C6 deficiency	OMIM:612446
T279	101-135	SpecificDisease	denotes	Complement component C6 deficiency	OMIM:612446
T280	137-140	SpecificDisease	denotes	C6D	OMIM:612446
T281	200-224	SpecificDisease	denotes	meningococcal meningitis	D008585
T282	273-276	SpecificDisease	denotes	C6D	OMIM:612446
T283	301-311	SpecificDisease	denotes	meningitis	D008581
T284	321-341	SpecificDisease	denotes	neisserial infection	D016870
T285	721-724	SpecificDisease	denotes	C6D	OMIM:612446

NCBI-Disease-Corpus-2stage-All

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	122-135	SpecificDisease	denotes	C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	321-341	SpecificDisease	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-rezarta-All

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-4oGuideline-All

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	122-135	SpecificDisease	denotes	C6 deficiency
T3	200-224	SpecificDisease	denotes	meningococcal meningitis
T4	273-276	SpecificDisease	denotes	C6D
T5	301-311	Modifier	denotes	meningitis
T6	321-341	Modifier	denotes	neisserial infection
T7	721-724	SpecificDisease	denotes	C6D

NCBI-Disease-Corpus-Simple-All

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	101-141	SpecificDisease	denotes	Complement component C6 deficiency (C6D)
T3	200-224	SpecificDisease	denotes	meningococcal meningitis
T4	273-276	SpecificDisease	denotes	C6D
T5	301-311	SpecificDisease	denotes	meningitis
T6	321-341	DiseaseClass	denotes	neisserial infection
T7	721-724	SpecificDisease	denotes	C6D

123456

Id	Subject	Object	Predicate	Lexical cue
T1	56-69	SpecificDisease	denotes	C6 deficiency
T2	122-135	SpecificDisease	denotes	C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	SpecificDisease	denotes	meningitis
T7	721-724	SpecificDisease	denotes	C6D

12345

Id	Subject	Object	Predicate	Lexical cue
T1	35-69	SpecificDisease	denotes	complement component C6 deficiency
T2	101-135	SpecificDisease	denotes	Complement component C6 deficiency
T3	137-140	SpecificDisease	denotes	C6D
T4	200-224	SpecificDisease	denotes	meningococcal meningitis
T5	273-276	SpecificDisease	denotes	C6D
T6	301-311	DiseaseClass	denotes	meningitis
T7	321-341	DiseaseClass	denotes	neisserial infection
T8	721-724	SpecificDisease	denotes	C6D