PubMed:9467376
Annnotations
Inflammaging
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-153 | Sentence | denotes | Inhibition of nuclear factor kappa B subunit p65 mRNA accumulation in lipopolysaccharide-stimulated human monocytic cells treated with sodium salicylate. |
| T2 | 154-340 | Sentence | denotes | Lipopolysaccharide is one of the most potent trigger substances for monocytes and macrophages causing secretion of inflammatory mediators such as tumor necrosis factor and interleukin-1. |
| T3 | 341-439 | Sentence | denotes | The nature of the nuclear factors involved in regulation of these cytokine genes is still unknown. |
| T4 | 440-661 | Sentence | denotes | Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins have been suggested to play an important role in gene transcription of inflammatory mediators when monocytes are stimulated with lipopolysaccharide. |
| T5 | 662-827 | Sentence | denotes | Nonsteroidal anti-inflammatory drugs such as salicylates have been used to treat symptoms of inflammation, and a new mechanism of drug action was suggested recently. |
| T6 | 828-1090 | Sentence | denotes | Salicylates have been shown to inhibit lipopolysaccharide-induced gene transcription via inhibition of NF-kappa B activation by preventing the degradation of NF-kappa B inhibitor "I kappa B", blocking the translocation of NF-kappa B into the nuclear compartment. |
| T7 | 1091-1174 | Sentence | denotes | However, the nature of the subunit involved in this mechanism has not been defined. |
| T8 | 1175-1417 | Sentence | denotes | To examine the mechanisms by which salicylates affect cytokine gene transcription, the amount of active and inactive NF-kappa B and NF-kappa B mRNA, in Porphyromonas gingivalis lipopolysaccharide-stimulated human monocytic cells was assessed. |
| T9 | 1418-1638 | Sentence | denotes | High doses of sodium salicylate suppressed NF-kappa B p65 mRNA accumulation, resulting in suppression of total NF-kappa B, p50 on tissue oligonucleotide had no effects on lipopolysaccharide-induced NF-kappa B activation. |
| T10 | 1639-1829 | Sentence | denotes | The data demonstrate that the p65 subunit of NF-kappa B is inhibited by salicylate treatment and highlight the role of salicylate in the control of gene expression of inflammatory mediators. |
| T1 | 0-153 | Sentence | denotes | Inhibition of nuclear factor kappa B subunit p65 mRNA accumulation in lipopolysaccharide-stimulated human monocytic cells treated with sodium salicylate. |
| T2 | 154-340 | Sentence | denotes | Lipopolysaccharide is one of the most potent trigger substances for monocytes and macrophages causing secretion of inflammatory mediators such as tumor necrosis factor and interleukin-1. |
| T3 | 341-439 | Sentence | denotes | The nature of the nuclear factors involved in regulation of these cytokine genes is still unknown. |
| T4 | 440-661 | Sentence | denotes | Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins have been suggested to play an important role in gene transcription of inflammatory mediators when monocytes are stimulated with lipopolysaccharide. |
| T5 | 662-827 | Sentence | denotes | Nonsteroidal anti-inflammatory drugs such as salicylates have been used to treat symptoms of inflammation, and a new mechanism of drug action was suggested recently. |
| T6 | 828-1090 | Sentence | denotes | Salicylates have been shown to inhibit lipopolysaccharide-induced gene transcription via inhibition of NF-kappa B activation by preventing the degradation of NF-kappa B inhibitor "I kappa B", blocking the translocation of NF-kappa B into the nuclear compartment. |
| T7 | 1091-1174 | Sentence | denotes | However, the nature of the subunit involved in this mechanism has not been defined. |
| T8 | 1175-1417 | Sentence | denotes | To examine the mechanisms by which salicylates affect cytokine gene transcription, the amount of active and inactive NF-kappa B and NF-kappa B mRNA, in Porphyromonas gingivalis lipopolysaccharide-stimulated human monocytic cells was assessed. |
| T9 | 1418-1638 | Sentence | denotes | High doses of sodium salicylate suppressed NF-kappa B p65 mRNA accumulation, resulting in suppression of total NF-kappa B, p50 on tissue oligonucleotide had no effects on lipopolysaccharide-induced NF-kappa B activation. |
| T10 | 1639-1829 | Sentence | denotes | The data demonstrate that the p65 subunit of NF-kappa B is inhibited by salicylate treatment and highlight the role of salicylate in the control of gene expression of inflammatory mediators. |
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 14-53 | RNA | denotes | nuclear factor kappa B subunit p65 mRNA |
| T2 | 70-121 | cell_line | denotes | lipopolysaccharide-stimulated human monocytic cells |
| T3 | 269-291 | protein | denotes | inflammatory mediators |
| T4 | 300-321 | protein | denotes | tumor necrosis factor |
| T5 | 326-339 | protein | denotes | interleukin-1 |
| T6 | 407-421 | DNA | denotes | cytokine genes |
| T7 | 440-512 | protein | denotes | Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins |
| T8 | 584-606 | protein | denotes | inflammatory mediators |
| T9 | 612-621 | cell_type | denotes | monocytes |
| T10 | 931-941 | protein | denotes | NF-kappa B |
| T11 | 986-1006 | protein | denotes | NF-kappa B inhibitor |
| T12 | 1008-1017 | protein | denotes | I kappa B |
| T13 | 1050-1060 | protein | denotes | NF-kappa B |
| T14 | 1229-1237 | protein | denotes | cytokine |
| T15 | 1292-1302 | protein | denotes | NF-kappa B |
| T16 | 1307-1322 | RNA | denotes | NF-kappa B mRNA |
| T17 | 1352-1403 | cell_line | denotes | lipopolysaccharide-stimulated human monocytic cells |
| T18 | 1461-1471 | protein | denotes | NF-kappa B |
| T19 | 1472-1480 | RNA | denotes | p65 mRNA |
| T20 | 1529-1539 | protein | denotes | NF-kappa B |
| T21 | 1541-1544 | protein | denotes | p50 |
| T22 | 1616-1626 | protein | denotes | NF-kappa B |
| T23 | 1669-1672 | protein | denotes | p65 |
| T24 | 1684-1694 | protein | denotes | NF-kappa B |
| T25 | 1806-1828 | protein | denotes | inflammatory mediators |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 70-89 | NP | denotes | lipopolysaccharide- |
| C2 | 154-172 | NP | denotes | Lipopolysaccharide |
| C6 | 222-231 | NP | denotes | monocytes |
| C4 | 269-339 | NP | denotes | inflammatory mediators such as tumor necrosis factor and interleukin-1 |
| C3 | 440-512 | NP | denotes | Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins |
| C5 | 584-606 | NP | denotes | inflammatory mediators |
| C7 | 612-621 | NP | denotes | monocytes |
| C8 | 642-660 | NP | denotes | lipopolysaccharide |
| C13 | 828-839 | NP | denotes | Salicylates |
| C9 | 867-886 | NP | denotes | lipopolysaccharide- |
| C10 | 1050-1060 | NP | denotes | NF-kappa B |
| C11 | 1186-1200 | NP | denotes | the mechanisms |
| C12 | 1204-1209 | NP | denotes | which |
| C14 | 1210-1221 | NP | denotes | salicylates |
| C15 | 1352-1370 | NP | denotes | lipopolysaccharide |
| C17 | 1589-1608 | NP | denotes | lipopolysaccharide- |
| C18 | 1684-1694 | NP | denotes | NF-kappa B |
| C19 | 1806-1828 | NP | denotes | inflammatory mediators |
| R1 | C2 | C1 | coref-ident | Lipopolysaccharide,lipopolysaccharide- |
| R2 | C5 | C4 | coref-ident | inflammatory mediators,inflammatory mediators such as tumor necrosis factor and interleukin-1 |
| R3 | C7 | C6 | coref-ident | monocytes,monocytes |
| R4 | C8 | C2 | coref-ident | lipopolysaccharide,Lipopolysaccharide |
| R5 | C9 | C8 | coref-ident | lipopolysaccharide-,lipopolysaccharide |
| R6 | C10 | C3 | coref-ident | NF-kappa B,Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins |
| R7 | C12 | C11 | coref-relat | which,the mechanisms |
| R8 | C14 | C13 | coref-ident | salicylates,Salicylates |
| R9 | C15 | C9 | coref-ident | lipopolysaccharide,lipopolysaccharide- |
| R10 | C17 | C15 | coref-ident | lipopolysaccharide-,lipopolysaccharide |
| R11 | C18 | C10 | coref-ident | NF-kappa B,NF-kappa B |
| R12 | C19 | C5 | coref-ident | inflammatory mediators,inflammatory mediators |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-153 | Sentence | denotes | Inhibition of nuclear factor kappa B subunit p65 mRNA accumulation in lipopolysaccharide-stimulated human monocytic cells treated with sodium salicylate. |
| S2 | 154-340 | Sentence | denotes | Lipopolysaccharide is one of the most potent trigger substances for monocytes and macrophages causing secretion of inflammatory mediators such as tumor necrosis factor and interleukin-1. |
| S3 | 341-439 | Sentence | denotes | The nature of the nuclear factors involved in regulation of these cytokine genes is still unknown. |
| S4 | 440-661 | Sentence | denotes | Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins have been suggested to play an important role in gene transcription of inflammatory mediators when monocytes are stimulated with lipopolysaccharide. |
| S5 | 662-827 | Sentence | denotes | Nonsteroidal anti-inflammatory drugs such as salicylates have been used to treat symptoms of inflammation, and a new mechanism of drug action was suggested recently. |
| S6 | 828-1090 | Sentence | denotes | Salicylates have been shown to inhibit lipopolysaccharide-induced gene transcription via inhibition of NF-kappa B activation by preventing the degradation of NF-kappa B inhibitor "I kappa B", blocking the translocation of NF-kappa B into the nuclear compartment. |
| S7 | 1091-1174 | Sentence | denotes | However, the nature of the subunit involved in this mechanism has not been defined. |
| S8 | 1175-1417 | Sentence | denotes | To examine the mechanisms by which salicylates affect cytokine gene transcription, the amount of active and inactive NF-kappa B and NF-kappa B mRNA, in Porphyromonas gingivalis lipopolysaccharide-stimulated human monocytic cells was assessed. |
| S9 | 1418-1638 | Sentence | denotes | High doses of sodium salicylate suppressed NF-kappa B p65 mRNA accumulation, resulting in suppression of total NF-kappa B, p50 on tissue oligonucleotide had no effects on lipopolysaccharide-induced NF-kappa B activation. |
| S10 | 1639-1829 | Sentence | denotes | The data demonstrate that the p65 subunit of NF-kappa B is inhibited by salicylate treatment and highlight the role of salicylate in the control of gene expression of inflammatory mediators. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 14-36 | protein_molecule | denotes | nuclear factor kappa B |
| T2 | 70-88 | lipid | denotes | lipopolysaccharide |
| T3 | 135-152 | other_organic_compound | denotes | sodium salicylate |
| T4 | 269-291 | protein_family_or_group | denotes | inflammatory mediators |
| T5 | 300-321 | protein_family_or_group | denotes | tumor necrosis factor |
| T6 | 326-339 | protein_molecule | denotes | interleukin-1 |
| T7 | 407-415 | protein_family_or_group | denotes | cytokine |
| T8 | 440-462 | protein_family_or_group | denotes | Nuclear factor kappa B |
| T9 | 464-474 | protein_complex | denotes | NF-kappa B |
| T10 | 491-494 | protein_subunit | denotes | p50 |
| T11 | 499-502 | protein_subunit | denotes | p65 |
| T12 | 562-580 | other_name | denotes | gene transcription |
| T13 | 584-606 | protein_family_or_group | denotes | inflammatory mediators |
| T14 | 612-621 | cell_type | denotes | monocytes |
| T15 | 642-660 | lipid | denotes | lipopolysaccharide |
| T16 | 662-674 | other_organic_compound | denotes | Nonsteroidal |
| T17 | 675-698 | other_organic_compound | denotes | anti-inflammatory drugs |
| T18 | 755-767 | other_name | denotes | inflammation |
| T19 | 828-839 | other_organic_compound | denotes | Salicylates |
| T20 | 867-885 | lipid | denotes | lipopolysaccharide |
| T21 | 894-912 | other_name | denotes | gene transcription |
| T22 | 931-941 | protein_complex | denotes | NF-kappa B |
| T23 | 986-996 | protein_molecule | denotes | NF-kappa B |
| T24 | 1008-1017 | protein_molecule | denotes | I kappa B |
| T25 | 1050-1060 | protein_complex | denotes | NF-kappa B |
| T26 | 1070-1089 | cell_component | denotes | nuclear compartment |
| T27 | 1210-1221 | other_organic_compound | denotes | salicylates |
| T28 | 1229-1237 | protein_family_or_group | denotes | cytokine |
| T29 | 1238-1256 | other_name | denotes | gene transcription |
| T30 | 1292-1302 | protein_complex | denotes | NF-kappa B |
| T31 | 1307-1317 | protein_complex | denotes | NF-kappa B |
| T32 | 1352-1370 | lipid | denotes | lipopolysaccharide |
| T33 | 1432-1449 | other_organic_compound | denotes | sodium salicylate |
| T34 | 1461-1471 | protein_complex | denotes | NF-kappa B |
| T35 | 1472-1475 | protein_subunit | denotes | p65 |
| T36 | 1529-1539 | protein_complex | denotes | NF-kappa B |
| T37 | 1541-1544 | protein_subunit | denotes | p50 |
| T38 | 1548-1570 | polynucleotide | denotes | tissue oligonucleotide |
| T39 | 1589-1607 | lipid | denotes | lipopolysaccharide |
| T40 | 1616-1626 | protein_complex | denotes | NF-kappa B |
| T41 | 1669-1672 | protein_subunit | denotes | p65 |
| T42 | 1684-1694 | protein_complex | denotes | NF-kappa B |
| T43 | 1711-1721 | other_organic_compound | denotes | salicylate |
| T44 | 1787-1802 | other_name | denotes | gene expression |
| T45 | 1806-1828 | protein_family_or_group | denotes | inflammatory mediators |