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PubMed:9451011 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-85 Sentence denotes Identification and analysis of a class 2 alpha-mannosidase from Aspergillus nidulans.
TextSentencer_T2 86-193 Sentence denotes A Class 2 alpha-mannosidase gene was cloned and sequenced from the filamentous fungus Aspergillus nidulans.
TextSentencer_T3 194-404 Sentence denotes A portion of the gene was amplified using degenerate oligonucleotide primers which were designed based on similarity between the Saccharomyces cerevisiae vacuolar and rat ER/cytosolic Class 2 protein sequences.
TextSentencer_T4 405-554 Sentence denotes The PCR amplification product was used to isolate the full length gene, and DNA sequencing revealed a 3383 bp coding region containing three introns.
TextSentencer_T5 555-678 Sentence denotes The predicted 1049 amino acid reading frame contained six potential N-glycosylation sites and encoded a protein of 118 kDa.
TextSentencer_T6 679-786 Sentence denotes The protein sequence did not appear to encode a typical fungal signal sequence or membrane spanning domain.
TextSentencer_T7 787-951 Sentence denotes Although the cellular location of the A.nidulans mannosidase was not determined, experimental evidence suggested that it was located within a subcellular organelle.
TextSentencer_T8 952-1223 Sentence denotes The Matchbox sequence similarity matrix indicated that the A.nidulans protein sequence was more highly similar to the rat ER/cytosolic (Rij = 0.33) and S.cerevisiae vacuolar alpha-mannosidases (Rij = 0.43) than the rat and yeast sequences were to each other (Rij = 0.29).
TextSentencer_T9 1224-1407 Sentence denotes These three enzymes were found to be distantly related to other Class 2 sequences, and compose a third subgroup of Class 2 alpha-mannosidases, as shown by ClustalW sequence alignment.
T1 0-85 Sentence denotes Identification and analysis of a class 2 alpha-mannosidase from Aspergillus nidulans.
T2 86-193 Sentence denotes A Class 2 alpha-mannosidase gene was cloned and sequenced from the filamentous fungus Aspergillus nidulans.
T3 194-404 Sentence denotes A portion of the gene was amplified using degenerate oligonucleotide primers which were designed based on similarity between the Saccharomyces cerevisiae vacuolar and rat ER/cytosolic Class 2 protein sequences.
T4 405-554 Sentence denotes The PCR amplification product was used to isolate the full length gene, and DNA sequencing revealed a 3383 bp coding region containing three introns.
T5 555-678 Sentence denotes The predicted 1049 amino acid reading frame contained six potential N-glycosylation sites and encoded a protein of 118 kDa.
T6 679-786 Sentence denotes The protein sequence did not appear to encode a typical fungal signal sequence or membrane spanning domain.
T7 787-951 Sentence denotes Although the cellular location of the A.nidulans mannosidase was not determined, experimental evidence suggested that it was located within a subcellular organelle.
T8 952-1223 Sentence denotes The Matchbox sequence similarity matrix indicated that the A.nidulans protein sequence was more highly similar to the rat ER/cytosolic (Rij = 0.33) and S.cerevisiae vacuolar alpha-mannosidases (Rij = 0.43) than the rat and yeast sequences were to each other (Rij = 0.29).
T9 1224-1407 Sentence denotes These three enzymes were found to be distantly related to other Class 2 sequences, and compose a third subgroup of Class 2 alpha-mannosidases, as shown by ClustalW sequence alignment.
T1 0-85 Sentence denotes Identification and analysis of a class 2 alpha-mannosidase from Aspergillus nidulans.
T2 86-193 Sentence denotes A Class 2 alpha-mannosidase gene was cloned and sequenced from the filamentous fungus Aspergillus nidulans.
T3 194-404 Sentence denotes A portion of the gene was amplified using degenerate oligonucleotide primers which were designed based on similarity between the Saccharomyces cerevisiae vacuolar and rat ER/cytosolic Class 2 protein sequences.
T4 405-554 Sentence denotes The PCR amplification product was used to isolate the full length gene, and DNA sequencing revealed a 3383 bp coding region containing three introns.
T5 555-678 Sentence denotes The predicted 1049 amino acid reading frame contained six potential N-glycosylation sites and encoded a protein of 118 kDa.
T6 679-786 Sentence denotes The protein sequence did not appear to encode a typical fungal signal sequence or membrane spanning domain.
T7 787-951 Sentence denotes Although the cellular location of the A.nidulans mannosidase was not determined, experimental evidence suggested that it was located within a subcellular organelle.
T8 952-1223 Sentence denotes The Matchbox sequence similarity matrix indicated that the A.nidulans protein sequence was more highly similar to the rat ER/cytosolic (Rij = 0.33) and S.cerevisiae vacuolar alpha-mannosidases (Rij = 0.43) than the rat and yeast sequences were to each other (Rij = 0.29).
T9 1224-1407 Sentence denotes These three enzymes were found to be distantly related to other Class 2 sequences, and compose a third subgroup of Class 2 alpha-mannosidases, as shown by ClustalW sequence alignment.

GlycoBiology-GDGDB

Id Subject Object Predicate Lexical cue
_T1 41-58 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00008 denotes alpha-mannosidase
_T2 96-113 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00008 denotes alpha-mannosidase
_T3 1126-1144 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00008 denotes alpha-mannosidases
_T4 1347-1365 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00008 denotes alpha-mannosidases

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T1 323-347 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC297 denotes Saccharomyces cerevisiae

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 114-118 FMAID:198663 denotes gene
_T2 211-215 FMAID:198663 denotes gene
_T3 386-393 FMAID:165447 denotes protein
_T4 386-393 FMAID:67257 denotes protein
_T5 471-475 FMAID:198663 denotes gene
_T6 546-553 FMAID:84121 denotes introns
_T7 546-553 FMAID:198075 denotes introns
_T8 574-584 FMAID:82739 denotes amino acid
_T9 574-584 FMAID:196728 denotes amino acid
_T10 659-666 FMAID:165447 denotes protein
_T11 659-666 FMAID:67257 denotes protein
_T12 683-690 FMAID:67257 denotes protein
_T13 683-690 FMAID:165447 denotes protein
_T14 761-778 FMAID:167608 denotes membrane spanning
_T15 761-778 FMAID:30322 denotes membrane spanning
_T16 941-950 FMAID:63832 denotes organelle
_T17 941-950 FMAID:162296 denotes organelle
_T18 941-950 FMAID:226763 denotes organelle
_T19 1022-1029 FMAID:67257 denotes protein
_T20 1022-1029 FMAID:165447 denotes protein

uniprot-human

Id Subject Object Predicate Lexical cue
T1 39-58 http://www.uniprot.org/uniprot/Q16706 denotes 2 alpha-mannosidase
T2 94-113 http://www.uniprot.org/uniprot/Q16706 denotes 2 alpha-mannosidase
T3 1345-1365 http://www.uniprot.org/uniprot/Q16706 denotes 2 alpha-mannosidases
T4 365-367 http://www.uniprot.org/uniprot/P03372 denotes ER
T5 1074-1076 http://www.uniprot.org/uniprot/P03372 denotes ER

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 39-58 http://www.uniprot.org/uniprot/P27046 denotes 2 alpha-mannosidase
T2 94-113 http://www.uniprot.org/uniprot/P27046 denotes 2 alpha-mannosidase
T3 1345-1365 http://www.uniprot.org/uniprot/P27046 denotes 2 alpha-mannosidases
T4 365-367 http://www.uniprot.org/uniprot/P19785 denotes ER
T5 1074-1076 http://www.uniprot.org/uniprot/P19785 denotes ER

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 64-75 http://purl.bioontology.org/ontology/NCBITAXON/454240 denotes Aspergillus
T2 64-75 http://purl.bioontology.org/ontology/NCBITAXON/41750 denotes Aspergillus
T3 64-75 http://purl.bioontology.org/ontology/NCBITAXON/40382 denotes Aspergillus
T4 64-84 http://purl.bioontology.org/ontology/NCBITAXON/162425 denotes Aspergillus nidulans
T5 165-171 http://purl.bioontology.org/ontology/STY/T004 denotes fungus
T6 172-183 http://purl.bioontology.org/ontology/NCBITAXON/454240 denotes Aspergillus
T7 172-183 http://purl.bioontology.org/ontology/NCBITAXON/41750 denotes Aspergillus
T8 172-183 http://purl.bioontology.org/ontology/NCBITAXON/40382 denotes Aspergillus
T9 172-192 http://purl.bioontology.org/ontology/NCBITAXON/162425 denotes Aspergillus nidulans
T10 323-336 http://purl.bioontology.org/ontology/NCBITAXON/4891 denotes Saccharomyces
T11 323-336 http://purl.bioontology.org/ontology/NCBITAXON/4930 denotes Saccharomyces
T12 323-336 http://purl.bioontology.org/ontology/NCBITAXON/4895 denotes Saccharomyces
T13 323-336 http://purl.bioontology.org/ontology/NCBITAXON/36034 denotes Saccharomyces
T14 1271-1278 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related

GO-BP

Id Subject Object Predicate Lexical cue
T1 625-638 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T2 742-748 http://purl.obolibrary.org/obo/GO_0023052 denotes signal
T3 800-808 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular

GO-CC

Id Subject Object Predicate Lexical cue
T1 365-367 http://purl.obolibrary.org/obo/GO_0005783 denotes ER
T2 1074-1076 http://purl.obolibrary.org/obo/GO_0005783 denotes ER
T3 368-377 http://purl.obolibrary.org/obo/GO_0005829 denotes cytosolic
T4 1077-1086 http://purl.obolibrary.org/obo/GO_0005829 denotes cytosolic
T5 761-769 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T6 941-950 http://purl.obolibrary.org/obo/GO_0043226 denotes organelle

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 670-673 http://www.glycoepitope.jp/epitopes/AN0571 denotes 118

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 64-84 OrganismTaxon denotes Aspergillus nidulans 162425
T2 172-192 OrganismTaxon denotes Aspergillus nidulans 162425
T3 323-347 OrganismTaxon denotes Saccharomyces cerevisiae 4932
T4 361-364 OrganismTaxon denotes rat 10114|10116
T6 1070-1073 OrganismTaxon denotes rat 10114|10116
T8 1167-1170 OrganismTaxon denotes rat 10114|10116

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 761-769 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T4 941-950 Body_part denotes organelle http://purl.obolibrary.org/obo/GO_0043226