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PubMed:9331065 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-167 Sentence denotes Loss of retinoic acid receptor beta expression in breast cancer and morphologically normal adjacent tissue but not in the normal breast tissue distant from the cancer.
TextSentencer_T2 168-342 Sentence denotes Retinoids and their receptors [retinoic acid receptors (RARs) and retinoid X receptors] play an important role in maintaining the balance between proliferation and apoptosis.
TextSentencer_T3 343-395 Sentence denotes Recently, Deng et al. [Science (Washington DC), 274:
TextSentencer_T4 396-550 Sentence denotes 2057-2059, 1996] reported a loss of heterozygosity on chromosome 3p24 in breast cancer specimens and the morphologically normal appearing adjacent tissue.
TextSentencer_T5 551-626 Sentence denotes The 3p24 locus includes, among other genes, the region coding for RAR-beta.
TextSentencer_T6 627-789 Sentence denotes This study was designed to determine whether there are abnormalities in the expression of retinoid receptors in surgical specimens of patients with breast cancer.
TextSentencer_T7 790-1018 Sentence denotes In 14 patients, transcripts of nuclear retinoid receptors were detected by in situ hybridization in formalin-fixed, paraffin-embedded specimens by means of digoxigenin-labeled riboprobes specific for RAR-alpha, -beta and -gamma.
TextSentencer_T8 1019-1168 Sentence denotes We found RAR-alpha expressed in all specimens, whereas RAR-gamma was expressed in 100% of normal breast tissue but in only 11 of 14 tumorous lesions.
TextSentencer_T9 1169-1389 Sentence denotes RAR-beta was found in all cases of normal breast tissue localized distant from the tumor, but in 13 of 14 cases it was completely absent in the tumor and the morphologically normal appearing tissue adjacent to the tumor.
TextSentencer_T10 1390-1482 Sentence denotes One possibility to explain the suppression of RAR-beta is a mutation in the promoter region.
TextSentencer_T11 1483-1674 Sentence denotes Sequencing the DNA extracted from paraffin-embedded tumor tissue of the corresponding breast cancer specimens, we were not able to detect any mutation in the retinoic acid-responsive element.
TextSentencer_T12 1675-1770 Sentence denotes Our results clearly indicate a crucial role of RAR-beta in the carcinogenesis of breast cancer.
T1 0-167 Sentence denotes Loss of retinoic acid receptor beta expression in breast cancer and morphologically normal adjacent tissue but not in the normal breast tissue distant from the cancer.
T2 168-342 Sentence denotes Retinoids and their receptors [retinoic acid receptors (RARs) and retinoid X receptors] play an important role in maintaining the balance between proliferation and apoptosis.
T3 343-395 Sentence denotes Recently, Deng et al. [Science (Washington DC), 274:
T4 396-550 Sentence denotes 2057-2059, 1996] reported a loss of heterozygosity on chromosome 3p24 in breast cancer specimens and the morphologically normal appearing adjacent tissue.
T5 551-626 Sentence denotes The 3p24 locus includes, among other genes, the region coding for RAR-beta.
T6 627-789 Sentence denotes This study was designed to determine whether there are abnormalities in the expression of retinoid receptors in surgical specimens of patients with breast cancer.
T7 790-1018 Sentence denotes In 14 patients, transcripts of nuclear retinoid receptors were detected by in situ hybridization in formalin-fixed, paraffin-embedded specimens by means of digoxigenin-labeled riboprobes specific for RAR-alpha, -beta and -gamma.
T8 1019-1168 Sentence denotes We found RAR-alpha expressed in all specimens, whereas RAR-gamma was expressed in 100% of normal breast tissue but in only 11 of 14 tumorous lesions.
T9 1169-1389 Sentence denotes RAR-beta was found in all cases of normal breast tissue localized distant from the tumor, but in 13 of 14 cases it was completely absent in the tumor and the morphologically normal appearing tissue adjacent to the tumor.
T10 1390-1482 Sentence denotes One possibility to explain the suppression of RAR-beta is a mutation in the promoter region.
T11 1483-1674 Sentence denotes Sequencing the DNA extracted from paraffin-embedded tumor tissue of the corresponding breast cancer specimens, we were not able to detect any mutation in the retinoic acid-responsive element.
T12 1675-1770 Sentence denotes Our results clearly indicate a crucial role of RAR-beta in the carcinogenesis of breast cancer.

DisGeNET

Id Subject Object Predicate Lexical cue
T0 8-35 gene:5915 denotes retinoic acid receptor beta
T1 50-63 disease:C0006142 denotes breast cancer
T2 8-35 gene:5915 denotes retinoic acid receptor beta
T3 50-63 disease:C0678222 denotes breast cancer
T4 8-35 gene:5915 denotes retinoic acid receptor beta
T5 160-166 disease:C0006826 denotes cancer
T6 8-35 gene:5915 denotes retinoic acid receptor beta
T7 160-166 disease:C1306459 denotes cancer
R1 T0 T1 associated_with retinoic acid receptor beta,breast cancer
R2 T2 T3 associated_with retinoic acid receptor beta,breast cancer
R3 T4 T5 associated_with retinoic acid receptor beta,cancer
R4 T6 T7 associated_with retinoic acid receptor beta,cancer

DisGeNet-2017-sample

Id Subject Object Predicate Lexical cue
T374 8-35 gene:5915 denotes retinoic acid receptor beta
T375 50-63 disease:C0006142 denotes breast cancer
R1 T374 T375 associated_with retinoic acid receptor beta,breast cancer
R2 T374 T375 associated_with retinoic acid receptor beta,breast cancer

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 50-56 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T2 129-135 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T3 469-475 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T4 775-781 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T5 1116-1122 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T6 1211-1217 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T7 1569-1575 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T8 1756-1762 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T9 100-106 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T10 136-142 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T11 543-549 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T12 1123-1129 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T13 1218-1224 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T14 1360-1366 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T15 1541-1547 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 50-56 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T2 129-135 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T3 469-475 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T4 775-781 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T5 1116-1122 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T6 1211-1217 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T7 1569-1575 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T8 1756-1762 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T9 100-106 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T10 136-142 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T11 543-549 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T12 1123-1129 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T13 1218-1224 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T14 1360-1366 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T15 1541-1547 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue