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PubMed:9326236 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-13 protein denotes Interleukin-7
T2 30-48 DNA denotes interleukin-2-gene
T3 63-92 cell_type denotes activated human T lymphocytes
T4 188-205 cell_type denotes activated T cells
T5 210-229 protein denotes activator protein-1
T6 281-319 protein denotes stromal-derived cytokine interleukin-7
T7 321-325 protein denotes IL-7
T8 334-343 DNA denotes IL-2-gene
T9 358-381 cell_type denotes activated T lymphocytes
T10 397-401 protein denotes IL-2
T11 428-449 protein denotes transcription factors
T12 466-475 DNA denotes IL-2-gene
T13 488-503 protein denotes T-cell receptor
T14 504-513 protein denotes (TCR)/CD3
T15 572-589 cell_type denotes activated T cells
T16 591-595 protein denotes NFAT
T17 598-617 protein denotes activator protein-1
T18 619-623 protein denotes AP-1
T19 630-651 protein denotes nuclear factor kappaB
T20 653-661 protein denotes NFkappaB
T21 676-699 protein denotes CD28 responsive complex
T22 701-707 protein denotes CD28RC
T23 741-745 protein denotes CD28
T24 771-823 cell_line denotes phytohemagglutinin/anti-CD28 activated T lymphocytes
T25 829-833 protein denotes IL-7
T26 862-866 protein denotes IL-2
T27 932-941 DNA denotes IL-2-gene
T28 1014-1018 protein denotes IL-7
T29 1109-1113 protein denotes IL-7
T30 1177-1181 protein denotes NFAT
T31 1192-1196 protein denotes AP-1
T32 1241-1249 protein denotes NFkappaB
T33 1254-1260 protein denotes CD28RC
T34 1328-1332 protein denotes IL-7
T35 1360-1364 protein denotes AP-1
T36 1424-1428 protein denotes AP-1
T37 1444-1456 protein denotes NFAT complex
T38 1479-1483 protein denotes IL-7
T39 1539-1559 protein denotes fos and jun proteins
T40 1569-1573 protein denotes AP-1

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-230 Sentence denotes Interleukin-7 upregulates the interleukin-2-gene expression in activated human T lymphocytes at the transcriptional level by enhancing the DNA binding activities of both nuclear factor of activated T cells and activator protein-1.
S2 231-382 Sentence denotes In the present report, we studied the role of the stromal-derived cytokine interleukin-7 (IL-7) in the IL-2-gene regulation in activated T lymphocytes.
S3 383-487 Sentence denotes Production of IL-2 requires the formation of transcription factors involved in the IL-2-gene regulation.
S4 488-753 Sentence denotes T-cell receptor (TCR)/CD3 engagement results in the activation of nuclear factor of activated T cells (NFAT), activator protein-1 (AP-1), and nuclear factor kappaB (NFkappaB), whereas the CD28 responsive complex (CD28RC) is activated in response to the CD28 signal.
S5 754-927 Sentence denotes Costimulation of phytohemagglutinin/anti-CD28 activated T lymphocytes with IL-7 induces a fivefold enhanced IL-2-mRNA accumulation and a 2.5-fold enhanced protein secretion.
S6 928-1068 Sentence denotes The IL-2-gene transcription rate is increased 3.4-fold, indicating that the effect of IL-7 is in part mediated at the transcriptional level.
S7 1069-1305 Sentence denotes The molecular mechanisms underlying the IL-7 effect involve the upregulation of the DNA binding activity of NFAT (60%) and AP-1 (120%), without affecting the activities of NFkappaB and CD28RC, which was confirmed by transfection assays.
S8 1306-1417 Sentence denotes We also show that the IL-7-induced enhancement of the AP-1-DNA binding activity is not cyclosporin A-sensitive.
S9 1418-1583 Sentence denotes Since AP-1 is part of the NFAT complex, we conclude that the IL-7-signaling pathway is involved in the activation of the fos and jun proteins of which AP-1 consists.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-13 NP denotes Interleukin-7
C2 63-92 NP denotes activated human T lymphocytes
C3 96-121 NP denotes the transcriptional level
C4 277-326 NP denotes the stromal-derived cytokine interleukin-7 (IL-7)
C5 330-354 NP denotes the IL-2-gene regulation
C6 358-381 NP denotes activated T lymphocytes
C7 462-486 NP denotes the IL-2-gene regulation
C8 554-596 NP denotes nuclear factor of activated T cells (NFAT)
C9 598-624 NP denotes activator protein-1 (AP-1)
C10 630-662 NP denotes nuclear factor kappaB (NFkappaB)
C11 672-708 NP denotes the CD28 responsive complex (CD28RC)
C12 829-833 NP denotes IL-7
C14 1014-1018 NP denotes IL-7
C13 1000-1018 NP denotes the effect of IL-7
C15 1042-1067 NP denotes the transcriptional level
C16 1105-1120 NP denotes the IL-7 effect
C17 1177-1181 NP denotes NFAT
C18 1192-1196 NP denotes AP-1
C19 1241-1249 NP denotes NFkappaB
C20 1254-1260 NP denotes CD28RC
C21 1424-1428 NP denotes AP-1
C22 1535-1559 NP denotes the fos and jun proteins
C23 1563-1568 NP denotes which
C24 1569-1573 NP denotes AP-1
R1 C4 C1 coref-ident the stromal-derived cytokine interleukin-7 (IL-7),Interleukin-7
R2 C6 C2 coref-ident activated T lymphocytes,activated human T lymphocytes
R3 C7 C5 coref-ident the IL-2-gene regulation,the IL-2-gene regulation
R4 C12 C4 coref-ident IL-7,the stromal-derived cytokine interleukin-7 (IL-7)
R5 C14 C12 coref-ident IL-7,IL-7
R6 C15 C3 coref-ident the transcriptional level,the transcriptional level
R7 C16 C13 coref-ident the IL-7 effect,the effect of IL-7
R8 C17 C8 coref-ident NFAT,nuclear factor of activated T cells (NFAT)
R9 C18 C9 coref-ident AP-1,activator protein-1 (AP-1)
R10 C19 C10 coref-ident NFkappaB,nuclear factor kappaB (NFkappaB)
R11 C20 C11 coref-ident CD28RC,the CD28 responsive complex (CD28RC)
R12 C21 C18 coref-ident AP-1,AP-1
R13 C23 C22 coref-relat which,the fos and jun proteins
R14 C24 C21 coref-ident AP-1,AP-1

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-13 protein_molecule denotes Interleukin-7
T2 30-48 DNA_domain_or_region denotes interleukin-2-gene
T3 63-92 cell_type denotes activated human T lymphocytes
T4 139-161 other_name denotes DNA binding activities
T5 188-205 cell_type denotes activated T cells
T6 210-229 protein_molecule denotes activator protein-1
T7 281-305 protein_family_or_group denotes stromal-derived cytokine
T8 306-319 protein_molecule denotes interleukin-7
T9 321-325 protein_molecule denotes IL-7
T10 334-343 DNA_domain_or_region denotes IL-2-gene
T11 358-381 cell_type denotes activated T lymphocytes
T12 397-401 protein_molecule denotes IL-2
T13 428-449 protein_family_or_group denotes transcription factors
T14 466-470 protein_molecule denotes IL-2
T15 488-503 protein_family_or_group denotes T-cell receptor
T16 504-513 protein_complex denotes (TCR)/CD3
T17 572-589 cell_type denotes activated T cells
T18 591-595 protein_family_or_group denotes NFAT
T19 598-617 protein_molecule denotes activator protein-1
T20 619-623 protein_molecule denotes AP-1
T21 630-651 protein_complex denotes nuclear factor kappaB
T22 653-661 protein_complex denotes NFkappaB
T23 676-699 protein_complex denotes CD28 responsive complex
T24 701-707 protein_complex denotes CD28RC
T25 741-745 protein_molecule denotes CD28
T26 771-789 protein_molecule denotes phytohemagglutinin
T27 800-823 cell_type denotes activated T lymphocytes
T28 829-833 protein_molecule denotes IL-7
T29 862-866 protein_molecule denotes IL-2
T30 900-926 other_name denotes enhanced protein secretion
T31 932-936 protein_molecule denotes IL-2
T32 1014-1018 protein_molecule denotes IL-7
T33 1109-1113 protein_molecule denotes IL-7
T34 1177-1181 protein_family_or_group denotes NFAT
T35 1192-1196 protein_molecule denotes AP-1
T36 1241-1249 protein_complex denotes NFkappaB
T37 1254-1260 protein_complex denotes CD28RC
T38 1285-1304 other_name denotes transfection assays
T39 1328-1332 protein_molecule denotes IL-7
T40 1360-1364 protein_molecule denotes AP-1
T41 1393-1416 other_name denotes cyclosporin A-sensitive
T42 1424-1428 protein_molecule denotes AP-1
T43 1444-1456 protein_complex denotes NFAT complex
T44 1479-1483 protein_molecule denotes IL-7
T45 1569-1573 protein_molecule denotes AP-1