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PubMed:9285527 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 4-40 protein denotes carboxyl-terminal cytoplasmic domain
T2 44-48 protein denotes CD36
T3 112-121 protein denotes NF-kappaB
T4 134-161 protein denotes tumor necrosis factor-alpha
T5 223-231 cell_type denotes monocyte
T6 231-243 cell_type denotes -macrophages
T7 393-410 protein denotes glycoprotein CD36
T8 483-503 cell_type denotes monocyte-macrophages
T9 551-555 protein denotes CD36
T10 620-624 protein denotes CD36
T11 637-671 cell_type denotes Chinese hampster ovary (CHO) cells
T12 743-763 protein denotes transcription factor
T13 764-773 protein denotes NF-kappaB
T14 858-876 DNA denotes NF-kappaB sequence
T15 901-925 cell_line denotes CD36-producing CHO cells
T16 935-959 protein denotes proinflammatory cytokine
T17 960-987 protein denotes tumor necrosis factor-alpha
T18 989-998 protein denotes TNF-alpha
T19 1069-1073 protein denotes CD36
T20 1101-1129 protein denotes human CD36-specific antibody
T21 1130-1134 protein denotes OKM5
T22 1174-1183 protein denotes NF-kappaB
T23 1224-1261 protein denotes carboxyl-terminal cytoplasmic segment
T24 1265-1269 protein denotes CD36
T25 1305-1315 protein denotes human CD36

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-162 Sentence denotes The carboxyl-terminal cytoplasmic domain of CD36 is required for oxidized low-density lipoprotein modulation of NF-kappaB activity by tumor necrosis factor-alpha.
S2 163-370 Sentence denotes The binding of oxidized low-density lipoprotein (Ox LDL) by monocyte-macrophages causes pleiotropic effects, including changes in gene expression, and is thought to represent an early event in atherogenesis.
S3 371-587 Sentence denotes The integral membrane glycoprotein CD36 appears to play a physiological role in binding and uptake of Ox LDL by monocyte-macrophages, although the molecular events associated with CD36-Ox LDL interaction are unknown.
S4 588-774 Sentence denotes To approach this issue, we used CD36 transfected Chinese hampster ovary (CHO) cells, exposed them to Ox LDL, and determined changes in the activity of the transcription factor NF-kappaB.
S5 775-1000 Sentence denotes We report here that Ox LDL enhanced DNA binding activity of nuclear extracts to an NF-kappaB sequence following activation of CD36-producing CHO cells with the proinflammatory cytokine tumor necrosis factor-alpha (TNF-alpha).
S6 1001-1135 Sentence denotes This enhanced DNA binding activity was inhibited by coincubation of CD36 transfected cells with the human CD36-specific antibody OKM5.
S7 1136-1270 Sentence denotes We also determined that activation of NF-kappaB DNA binding activity required an intact carboxyl-terminal cytoplasmic segment on CD36.
S8 1271-1374 Sentence denotes Our results support the idea that human CD36 mediates signal transduction events in response to Ox LDL.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 44-48 NP denotes CD36
C2 112-130 NP denotes NF-kappaB activity
C3 178-219 NP denotes oxidized low-density lipoprotein (Ox LDL)
C4 223-243 NP denotes monocyte-macrophages
C5 371-410 NP denotes The integral membrane glycoprotein CD36
C6 473-479 NP denotes Ox LDL
C7 483-503 NP denotes monocyte-macrophages
C8 620-671 NP denotes CD36 transfected Chinese hampster ovary (CHO) cells
C9 681-685 NP denotes them
C10 689-695 NP denotes Ox LDL
C11 723-773 NP denotes the activity of the transcription factor NF-kappaB
C12 795-801 NP denotes Ox LDL
C13 1069-1091 NP denotes CD36 transfected cells
C14 1291-1299 NP denotes the idea
C15 1300-1304 NP denotes that
C16 1367-1373 NP denotes Ox LDL
R1 C5 C1 coref-ident The integral membrane glycoprotein CD36,CD36
R2 C6 C3 coref-ident Ox LDL,oxidized low-density lipoprotein (Ox LDL)
R3 C7 C4 coref-ident monocyte-macrophages,monocyte-macrophages
R4 C9 C8 coref-pron them,CD36 transfected Chinese hampster ovary (CHO) cells
R5 C10 C6 coref-ident Ox LDL,Ox LDL
R6 C11 C2 coref-ident the activity of the transcription factor NF-kappaB,NF-kappaB activity
R7 C12 C10 coref-ident Ox LDL,Ox LDL
R8 C13 C8 coref-ident CD36 transfected cells,CD36 transfected Chinese hampster ovary (CHO) cells
R9 C15 C14 coref-relat that,the idea
R10 C16 C12 coref-ident Ox LDL,Ox LDL

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 4-40 protein_domain_or_region denotes carboxyl-terminal cytoplasmic domain
T2 44-48 protein_molecule denotes CD36
T3 74-97 lipid denotes low-density lipoprotein
T4 112-121 protein_complex denotes NF-kappaB
T5 134-161 protein_molecule denotes tumor necrosis factor-alpha
T6 187-210 lipid denotes low-density lipoprotein
T7 212-218 lipid denotes Ox LDL
T8 223-231 cell_type denotes monocyte
T9 231-243 cell_type denotes -macrophages
T10 251-270 other_name denotes pleiotropic effects
T11 356-369 other_name denotes atherogenesis
T12 393-405 protein_molecule denotes glycoprotein
T13 406-410 protein_molecule denotes CD36
T14 473-479 lipid denotes Ox LDL
T15 483-492 cell_type denotes monocyte-
T16 492-503 cell_type denotes macrophages
T17 551-555 protein_molecule denotes CD36
T18 555-562 lipid denotes -Ox LDL
T19 620-624 protein_molecule denotes CD36
T20 637-671 cell_type denotes Chinese hampster ovary (CHO) cells
T21 689-695 lipid denotes Ox LDL
T22 743-763 protein_family_or_group denotes transcription factor
T23 764-773 protein_complex denotes NF-kappaB
T24 795-801 lipid denotes Ox LDL
T25 835-851 cell_component denotes nuclear extracts
T26 858-867 protein_complex denotes NF-kappaB
T27 901-905 protein_molecule denotes CD36
T28 935-959 protein_family_or_group denotes proinflammatory cytokine
T29 960-987 protein_molecule denotes tumor necrosis factor-alpha
T30 989-998 protein_molecule denotes TNF-alpha
T31 1069-1073 protein_molecule denotes CD36
T32 1101-1106 protein_family_or_group denotes human
T33 1107-1111 protein_molecule denotes CD36
T34 1130-1134 protein_molecule denotes OKM5
T35 1174-1183 protein_complex denotes NF-kappaB
T36 1224-1261 protein_domain_or_region denotes carboxyl-terminal cytoplasmic segment
T37 1265-1269 protein_molecule denotes CD36
T38 1305-1310 protein_molecule denotes human
T39 1311-1315 protein_molecule denotes CD36
T40 1325-1351 other_name denotes signal transduction events
T41 1367-1373 lipid denotes Ox LDL