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PubMed:9139081 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 13-27 DNA denotes adenovirus DNA
T2 31-65 cell_type denotes peripheral blood mononuclear cells
T3 216-227 cell_type denotes Lymphocytes
T4 366-380 DNA denotes adenovirus DNA
T5 415-449 cell_type denotes peripheral blood mononuclear cells
T6 451-455 cell_type denotes PBMC
T7 575-589 DNA denotes adenovirus DNA
T8 603-617 DNA denotes nested primers
T9 662-692 DNA denotes adenovirus E1A and hexon genes
T10 698-719 DNA denotes E1A and hexon primers
T11 854-878 DNA denotes adenovirus type 2 genome
T12 939-943 cell_type denotes PBMC
T13 1045-1059 DNA denotes adenovirus DNA
T14 1096-1100 cell_type denotes PBMC
T15 1183-1197 DNA denotes adenovirus DNA
T16 1254-1258 cell_type denotes PBMC
T17 1347-1351 cell_type denotes PBMC

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 13-27 NP denotes adenovirus DNA
C2 31-65 NP denotes peripheral blood mononuclear cells
C3 102-112 NP denotes Adenovirus
C4 127-148 NP denotes persistent infections
C5 149-154 NP denotes which
C6 328-338 NP denotes adenovirus
C7 366-380 NP denotes adenovirus DNA
C8 415-456 NP denotes peripheral blood mononuclear cells (PBMC)
C9 575-589 NP denotes adenovirus DNA
C10 694-719 NP denotes The E1A and hexon primers
C11 811-823 NP denotes Both primers
C12 1045-1059 NP denotes adenovirus DNA
C13 1183-1197 NP denotes adenovirus DNA
C14 1254-1258 NP denotes PBMC
C15 1347-1351 NP denotes PBMC
R1 C5 C4 coref-relat which,persistent infections
R2 C6 C3 coref-ident adenovirus,Adenovirus
R3 C7 C1 coref-ident adenovirus DNA,adenovirus DNA
R4 C8 C2 coref-ident peripheral blood mononuclear cells (PBMC),peripheral blood mononuclear cells
R5 C9 C7 coref-ident adenovirus DNA,adenovirus DNA
R6 C11 C10 coref-ident Both primers,The E1A and hexon primers
R7 C12 C9 coref-ident adenovirus DNA,adenovirus DNA
R8 C13 C12 coref-ident adenovirus DNA,adenovirus DNA
R9 C14 C8 coref-ident PBMC,peripheral blood mononuclear cells (PBMC)
R10 C15 C14 coref-ident PBMC,PBMC

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-101 Sentence denotes Detection of adenovirus DNA in peripheral blood mononuclear cells by polymerase chain reaction assay.
S2 102-215 Sentence denotes Adenovirus can establish persistent infections which may reactivate and cause disease in immunocompromised hosts.
S3 216-457 Sentence denotes Lymphocytes have been postulated to serve as a site of adenoviral persistence based upon the ability to isolate adenovirus from tonsils and to detect adenovirus DNA by Southern blot hybridization in peripheral blood mononuclear cells (PBMC).
S4 458-590 Sentence denotes To test this hypothesis, a more sensitive and specific polymerase chain reaction (PCR) assay was developed to detect adenovirus DNA.
S5 591-693 Sentence denotes Two sets of nested primers were designed to conserved sequences in the adenovirus E1A and hexon genes.
S6 694-810 Sentence denotes The E1A and hexon primers amplified DNA from representative adenoviral serotypes in all six adenoviral groups (A-F).
S7 811-927 Sentence denotes Both primers detected a single copy of the adenovirus type 2 genome but were less sensitive for the group B type 35.
S8 928-1080 Sentence denotes None of 33 PBMC specimens from healthy adults and only one of 40 pediatric samples was positive (at a low level) for adenovirus DNA by nested PCR assay.
S9 1081-1198 Sentence denotes In comparison, PBMC from two children with fatal adenoviral infection were both strongly positive for adenovirus DNA.
S10 1199-1324 Sentence denotes It is concluded that, in contrast to a previous study, PBMC are not a common site of persistent group C adenoviral infection.
S11 1325-1454 Sentence denotes In addition, assay of PBMC by the adenovirus-specific PCR may help detect early invasive disease and warrants further evaluation.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 13-23 virus denotes adenovirus
T2 31-65 cell_type denotes peripheral blood mononuclear cells
T3 69-100 other_name denotes polymerase chain reaction assay
T4 102-112 virus denotes Adenovirus
T5 127-148 other_name denotes persistent infections
T6 191-214 other_name denotes immunocompromised hosts
T7 216-227 cell_type denotes Lymphocytes
T8 271-293 other_name denotes adenoviral persistence
T9 328-338 virus denotes adenovirus
T10 344-351 body_part denotes tonsils
T11 366-376 virus denotes adenovirus
T12 384-411 other_name denotes Southern blot hybridization
T13 415-449 cell_type denotes peripheral blood mononuclear cells
T14 451-455 cell_type denotes PBMC
T15 513-538 other_name denotes polymerase chain reaction
T16 540-543 other_name denotes PCR
T17 575-585 virus denotes adenovirus
T18 603-617 DNA_molecule denotes nested primers
T19 662-672 virus denotes adenovirus
T20 681-686 protein_molecule denotes hexon
T21 698-701 protein_molecule denotes E1A
T22 706-711 protein_molecule denotes hexon
T23 739-774 other_name denotes representative adenoviral serotypes
T24 854-871 virus denotes adenovirus type 2
T25 939-943 cell_type denotes PBMC
T26 959-973 multi_cell denotes healthy adults
T27 993-1010 other_name denotes pediatric samples
T28 1045-1059 DNA_family_or_group denotes adenovirus DNA
T29 1063-1069 other_name denotes nested
T30 1070-1073 other_name denotes PCR
T31 1096-1100 cell_type denotes PBMC
T32 1110-1118 multi_cell denotes children
T33 1124-1150 other_name denotes fatal adenoviral infection
T34 1183-1193 virus denotes adenovirus
T35 1254-1258 cell_type denotes PBMC
T36 1284-1302 other_name denotes persistent group C
T37 1303-1323 other_name denotes adenoviral infection
T38 1347-1351 cell_type denotes PBMC
T39 1359-1369 virus denotes adenovirus
T40 1379-1382 other_name denotes PCR
T41 1399-1421 other_name denotes early invasive disease