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PubMed:8910600 JSONTXT

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ggdb-test

Id Subject Object Predicate Lexical cue
T1 80-88 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T2 246-254 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T3 404-412 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
T4 438-448 https://acgg.asia/db/ggdb/info/gg064 denotes ST8Sia III
T5 595-603 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T6 653-661 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
T7 717-725 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T8 1004-1012 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T9 1045-1048 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T10 1085-1093 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T11 1121-1129 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
T12 1177-1180 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T13 1202-1210 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T14 1392-1400 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T15 1487-1495 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T16 1631-1639 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T17 1836-1844 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 167-171 Glycan_Motif denotes GD1c https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81983KG
T2 173-177 Glycan_Motif denotes GT1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93468NI|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68110IF
T4 179-183 Glycan_Motif denotes GQ1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G18625KA|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G17077FL
T6 188-191 Glycan_Motif denotes GT3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93899SO|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G33570YF
T8 414-417 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T10 808-812 Glycan_Motif denotes GM1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G03277YI
T11 814-818 Glycan_Motif denotes GD1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G69277LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46677TE
T13 820-824 Glycan_Motif denotes GT1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G40183QN|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G05952XV
T15 830-833 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T17 851-855 Glycan_Motif denotes GD1c https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81983KG
T18 857-861 Glycan_Motif denotes GT1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93468NI|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68110IF
T20 863-867 Glycan_Motif denotes GQ1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G18625KA|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G17077FL
T22 873-876 Glycan_Motif denotes GT3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93899SO|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G33570YF
T24 919-923 Glycan_Motif denotes GM1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G03277YI
T25 925-929 Glycan_Motif denotes GD1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G69277LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46677TE
T27 931-935 Glycan_Motif denotes GT1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G40183QN|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G05952XV
T29 940-943 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T31 1045-1048 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T33 1177-1180 Glycan_Motif denotes GM3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G91237TK|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G56516VH
T35 1248-1252 Glycan_Motif denotes GD1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G69277LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46677TE
T37 1361-1365 Glycan_Motif denotes GT1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93468NI|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68110IF
T39 1370-1374 Glycan_Motif denotes GQ1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G18625KA|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G17077FL
T41 1439-1443 Glycan_Motif denotes GD1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G69277LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46677TE
T43 1451-1455 Glycan_Motif denotes GT1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G40183QN|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G05952XV
T45 1914-1918 Glycan_Motif denotes GD1c https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81983KG
T46 1920-1924 Glycan_Motif denotes GT1a https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93468NI|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68110IF
T48 1926-1930 Glycan_Motif denotes GQ1b https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G18625KA|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G17077FL
T50 1936-1939 Glycan_Motif denotes GT3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G93899SO|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G33570YF

GGDB-2020

Id Subject Object Predicate Lexical cue
T1 80-88 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T2 246-254 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T3 404-412 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
T4 438-448 https://acgg.asia/db/ggdb/info/gg064 denotes ST8Sia III
T5 595-603 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T6 653-661 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
T7 717-725 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T8 1004-1012 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T9 1045-1048 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T10 1085-1093 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T11 1121-1129 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
T12 1177-1180 https://acgg.asia/db/ggdb/info/gg052 denotes GM3
T13 1202-1210 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T14 1392-1400 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T15 1487-1495 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T16 1631-1639 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
T17 1836-1844 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V

sentences

Id Subject Object Predicate Lexical cue
T1 0-90 Sentence denotes Molecular cloning and expression of a fifth type of alpha2,8-sialyltransferase (ST8Sia V).
T2 91-192 Sentence denotes Its substrate specificity is similar to that of SAT-V/III, which synthesize GD1c, GT1a, GQ1b and GT3.
T3 193-557 Sentence denotes The cDNAs encoding a new alpha2,8-sialyltransferase (ST8Sia V) were cloned from a mouse brain cDNA library by means of a polymerase chain reaction-based method using the nucleotide sequence information on mouse ST8Sia I (GD3 synthase) and mouse ST8Sia III (Siaalpha2,3Galbeta1,4GlcNAcalpha2,8-sialyltransferase ), both of which exhibit activity toward glycolipids.
T4 558-684 Sentence denotes The predicted amino acid sequence of ST8Sia V shows 36.1% and 15.0% identity to those of mouse ST8Sia I and III, respectively.
T5 685-891 Sentence denotes The recombinant protein A-fused ST8Sia V expressed in COS-7 cells exhibited an alpha2, 8-sialyltransferase activity toward GM1b, GD1a, GT1b, and GD3, and synthesized GD1c, GT1a, GQ1b, and GT3, respectively.
T6 892-994 Sentence denotes The apparent Km values for GM1b, GD1a, GT1b and GD3 were 1.1, 0.082, 0.070, and 0.28 mM, respectively.
T7 995-1049 Sentence denotes However, ST8Sia V did not exhibit activity toward GM3.
T8 1050-1181 Sentence denotes Thus, the substrate specificity of ST8Sia V is different from those of ST8Sia I and III, both of which exhibit activity toward GM3.
T9 1182-1464 Sentence denotes Transfection of the ST8Sia V gene into COS-7 cells, which express GD1a as a major glycolipid, led to the expression of determinants for monoclonal antibody 4F10, which recognizes GT1a and GQ1b, suggesting that ST8Sia V exhibits activity toward gangliosides GD1a and/or GT1b in vivo.
T10 1465-1626 Sentence denotes The expression of the ST8Sia V gene was tissue- and developmental stage-specific, and was clearly different from those of other alpha2,8-sialyltransferase genes.
T11 1627-1727 Sentence denotes The ST8Sia V gene was strongly expressed in the brain and weakly in other tissues such as the liver.
T12 1728-1798 Sentence denotes In addition, its expression was greater in the adult than fetal brain.
T13 1799-1950 Sentence denotes These results strongly indicate that ST8Sia V is a candidate for SAT-V, the alpha2,8-sialyltransferase involved in GD1c, GT1a, GQ1b, and GT3 synthesis.
T1 0-90 Sentence denotes Molecular cloning and expression of a fifth type of alpha2,8-sialyltransferase (ST8Sia V).
T2 91-192 Sentence denotes Its substrate specificity is similar to that of SAT-V/III, which synthesize GD1c, GT1a, GQ1b and GT3.
T3 193-557 Sentence denotes The cDNAs encoding a new alpha2,8-sialyltransferase (ST8Sia V) were cloned from a mouse brain cDNA library by means of a polymerase chain reaction-based method using the nucleotide sequence information on mouse ST8Sia I (GD3 synthase) and mouse ST8Sia III (Siaalpha2,3Galbeta1,4GlcNAcalpha2,8-sialyltransferase ), both of which exhibit activity toward glycolipids.
T4 558-684 Sentence denotes The predicted amino acid sequence of ST8Sia V shows 36.1% and 15.0% identity to those of mouse ST8Sia I and III, respectively.
T5 685-891 Sentence denotes The recombinant protein A-fused ST8Sia V expressed in COS-7 cells exhibited an alpha2, 8-sialyltransferase activity toward GM1b, GD1a, GT1b, and GD3, and synthesized GD1c, GT1a, GQ1b, and GT3, respectively.
T6 892-994 Sentence denotes The apparent Km values for GM1b, GD1a, GT1b and GD3 were 1.1, 0.082, 0.070, and 0.28 mM, respectively.
T7 995-1049 Sentence denotes However, ST8Sia V did not exhibit activity toward GM3.
T8 1050-1181 Sentence denotes Thus, the substrate specificity of ST8Sia V is different from those of ST8Sia I and III, both of which exhibit activity toward GM3.
T9 1182-1464 Sentence denotes Transfection of the ST8Sia V gene into COS-7 cells, which express GD1a as a major glycolipid, led to the expression of determinants for monoclonal antibody 4F10, which recognizes GT1a and GQ1b, suggesting that ST8Sia V exhibits activity toward gangliosides GD1a and/or GT1b in vivo.
T10 1465-1626 Sentence denotes The expression of the ST8Sia V gene was tissue- and developmental stage-specific, and was clearly different from those of other alpha2,8-sialyltransferase genes.
T11 1627-1727 Sentence denotes The ST8Sia V gene was strongly expressed in the brain and weakly in other tissues such as the liver.
T12 1728-1798 Sentence denotes In addition, its expression was greater in the adult than fetal brain.
T13 1799-1950 Sentence denotes These results strongly indicate that ST8Sia V is a candidate for SAT-V, the alpha2,8-sialyltransferase involved in GD1c, GT1a, GQ1b, and GT3 synthesis.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 167-171 https://glytoucan.org/Structures/Glycans/G81983KG denotes GD1c
T2 173-177 https://glytoucan.org/Structures/Glycans/G68110IF denotes GT1a
T3 173-177 https://glytoucan.org/Structures/Glycans/G93468NI denotes GT1a
T4 179-183 https://glytoucan.org/Structures/Glycans/G17077FL denotes GQ1b
T5 179-183 https://glytoucan.org/Structures/Glycans/G18625KA denotes GQ1b
T6 188-191 https://glytoucan.org/Structures/Glycans/G33570YF denotes GT3
T7 188-191 https://glytoucan.org/Structures/Glycans/G93899SO denotes GT3
T8 414-417 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T9 414-417 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T10 808-812 https://glytoucan.org/Structures/Glycans/G03277YI denotes GM1b
T11 814-818 https://glytoucan.org/Structures/Glycans/G46677TE denotes GD1a
T12 814-818 https://glytoucan.org/Structures/Glycans/G69277LC denotes GD1a
T13 820-824 https://glytoucan.org/Structures/Glycans/G05952XV denotes GT1b
T14 820-824 https://glytoucan.org/Structures/Glycans/G40183QN denotes GT1b
T15 830-833 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T16 830-833 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T17 851-855 https://glytoucan.org/Structures/Glycans/G81983KG denotes GD1c
T18 857-861 https://glytoucan.org/Structures/Glycans/G68110IF denotes GT1a
T19 857-861 https://glytoucan.org/Structures/Glycans/G93468NI denotes GT1a
T20 863-867 https://glytoucan.org/Structures/Glycans/G17077FL denotes GQ1b
T21 863-867 https://glytoucan.org/Structures/Glycans/G18625KA denotes GQ1b
T22 873-876 https://glytoucan.org/Structures/Glycans/G33570YF denotes GT3
T23 873-876 https://glytoucan.org/Structures/Glycans/G93899SO denotes GT3
T24 919-923 https://glytoucan.org/Structures/Glycans/G03277YI denotes GM1b
T25 925-929 https://glytoucan.org/Structures/Glycans/G46677TE denotes GD1a
T26 925-929 https://glytoucan.org/Structures/Glycans/G69277LC denotes GD1a
T27 931-935 https://glytoucan.org/Structures/Glycans/G05952XV denotes GT1b
T28 931-935 https://glytoucan.org/Structures/Glycans/G40183QN denotes GT1b
T29 940-943 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T30 940-943 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T31 1045-1048 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T32 1045-1048 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T33 1177-1180 https://glytoucan.org/Structures/Glycans/G56516VH denotes GM3
T34 1177-1180 https://glytoucan.org/Structures/Glycans/G91237TK denotes GM3
T35 1248-1252 https://glytoucan.org/Structures/Glycans/G46677TE denotes GD1a
T36 1248-1252 https://glytoucan.org/Structures/Glycans/G69277LC denotes GD1a
T37 1361-1365 https://glytoucan.org/Structures/Glycans/G68110IF denotes GT1a
T38 1361-1365 https://glytoucan.org/Structures/Glycans/G93468NI denotes GT1a
T39 1370-1374 https://glytoucan.org/Structures/Glycans/G17077FL denotes GQ1b
T40 1370-1374 https://glytoucan.org/Structures/Glycans/G18625KA denotes GQ1b
T41 1439-1443 https://glytoucan.org/Structures/Glycans/G46677TE denotes GD1a
T42 1439-1443 https://glytoucan.org/Structures/Glycans/G69277LC denotes GD1a
T43 1451-1455 https://glytoucan.org/Structures/Glycans/G05952XV denotes GT1b
T44 1451-1455 https://glytoucan.org/Structures/Glycans/G40183QN denotes GT1b
T45 1914-1918 https://glytoucan.org/Structures/Glycans/G81983KG denotes GD1c
T46 1920-1924 https://glytoucan.org/Structures/Glycans/G68110IF denotes GT1a
T47 1920-1924 https://glytoucan.org/Structures/Glycans/G93468NI denotes GT1a
T48 1926-1930 https://glytoucan.org/Structures/Glycans/G17077FL denotes GQ1b
T49 1926-1930 https://glytoucan.org/Structures/Glycans/G18625KA denotes GQ1b
T50 1936-1939 https://glytoucan.org/Structures/Glycans/G33570YF denotes GT3
T51 1936-1939 https://glytoucan.org/Structures/Glycans/G93899SO denotes GT3

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 173-177 http://www.glycoepitope.jp/epitopes/EP0066 denotes GT1a
T2 179-183 http://www.glycoepitope.jp/epitopes/EP0069 denotes GQ1b
T3 188-191 http://www.glycoepitope.jp/epitopes/EP0070 denotes GT3
T4 808-812 http://www.glycoepitope.jp/epitopes/EP0048 denotes GM1b
T5 814-818 http://www.glycoepitope.jp/epitopes/EP0056 denotes GD1a
T6 820-824 http://www.glycoepitope.jp/epitopes/EP0067 denotes GT1b
T7 857-861 http://www.glycoepitope.jp/epitopes/EP0066 denotes GT1a
T8 863-867 http://www.glycoepitope.jp/epitopes/EP0069 denotes GQ1b
T9 873-876 http://www.glycoepitope.jp/epitopes/EP0070 denotes GT3
T10 919-923 http://www.glycoepitope.jp/epitopes/EP0048 denotes GM1b
T11 925-929 http://www.glycoepitope.jp/epitopes/EP0056 denotes GD1a
T12 931-935 http://www.glycoepitope.jp/epitopes/EP0067 denotes GT1b
T13 1248-1252 http://www.glycoepitope.jp/epitopes/EP0056 denotes GD1a
T14 1361-1365 http://www.glycoepitope.jp/epitopes/EP0066 denotes GT1a
T15 1370-1374 http://www.glycoepitope.jp/epitopes/EP0069 denotes GQ1b
T16 1439-1443 http://www.glycoepitope.jp/epitopes/EP0056 denotes GD1a
T17 1451-1455 http://www.glycoepitope.jp/epitopes/EP0067 denotes GT1b
T18 1920-1924 http://www.glycoepitope.jp/epitopes/EP0066 denotes GT1a
T19 1926-1930 http://www.glycoepitope.jp/epitopes/EP0069 denotes GQ1b
T20 1936-1939 http://www.glycoepitope.jp/epitopes/EP0070 denotes GT3

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 281-286 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T2 1675-1680 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T3 1721-1726 http://purl.obolibrary.org/obo/MAT_0000097 denotes liver
T4 1792-1797 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 80-88 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T2 246-254 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T3 404-412 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
PD-GlycoGenes20190927-B_T4 438-448 https://acgg.asia/db/ggdb/info/gg064 denotes ST8Sia III
PD-GlycoGenes20190927-B_T5 595-603 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T6 653-661 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
PD-GlycoGenes20190927-B_T7 717-725 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T8 1004-1012 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T9 1085-1093 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T10 1121-1129 https://acgg.asia/db/ggdb/info/gg062 denotes ST8Sia I
PD-GlycoGenes20190927-B_T11 1202-1210 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T12 1392-1400 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T13 1487-1495 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T14 1631-1639 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V
PD-GlycoGenes20190927-B_T15 1836-1844 https://acgg.asia/db/ggdb/info/gg066 denotes ST8Sia V

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 281-286 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T2 1675-1680 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T3 1721-1726 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T4 1792-1797 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T24 1926-1930 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T25 1936-1939 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T1 173-177 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF
T2 179-183 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T3 188-191 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T4 414-417 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T5 808-812 Glycan denotes GM1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G03277YI
T6 814-818 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T7 820-824 Glycan denotes GT1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN
T8 830-833 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T9 857-861 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF
T10 863-867 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T11 873-876 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T12 919-923 Glycan denotes GM1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G03277YI
T13 925-929 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T14 931-935 Glycan denotes GT1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN
T15 940-943 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T16 1045-1048 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T17 1177-1180 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T18 1248-1252 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T19 1361-1365 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF
T20 1370-1374 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T21 1439-1443 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T22 1451-1455 Glycan denotes GT1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN
T23 1920-1924 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 173-177 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T2 179-183 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T3 188-191 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070
T4 808-812 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1b http://www.glycoepitope.jp/epitopes/EP0048
T5 814-818 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T6 820-824 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1b http://www.glycoepitope.jp/epitopes/EP0067
T7 857-861 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T8 863-867 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T9 873-876 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070
T10 919-923 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1b http://www.glycoepitope.jp/epitopes/EP0048
T11 925-929 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T12 931-935 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1b http://www.glycoepitope.jp/epitopes/EP0067
T13 1248-1252 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T14 1361-1365 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T15 1370-1374 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T16 1439-1443 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T17 1451-1455 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1b http://www.glycoepitope.jp/epitopes/EP0067
T18 1920-1924 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T19 1926-1930 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T20 1936-1939 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 275-280 OrganismTaxon denotes mouse 10088|10090
T3 398-403 OrganismTaxon denotes mouse 10088|10090
T5 432-437 OrganismTaxon denotes mouse 10088|10090
T7 647-652 OrganismTaxon denotes mouse 10088|10090

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 281-286 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T3 1505-1511 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T4 1675-1680 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T6 1721-1726 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T7 1792-1797 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 281-286 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T2 1675-1680 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T3 1721-1726 Body_part denotes liver http://purl.obolibrary.org/obo/MAT_0000097
T4 1792-1797 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098

sentences

Id Subject Object Predicate Lexical cue
T1 0-90 Sentence denotes Molecular cloning and expression of a fifth type of alpha2,8-sialyltransferase (ST8Sia V).
T2 91-192 Sentence denotes Its substrate specificity is similar to that of SAT-V/III, which synthesize GD1c, GT1a, GQ1b and GT3.
T3 193-557 Sentence denotes The cDNAs encoding a new alpha2,8-sialyltransferase (ST8Sia V) were cloned from a mouse brain cDNA library by means of a polymerase chain reaction-based method using the nucleotide sequence information on mouse ST8Sia I (GD3 synthase) and mouse ST8Sia III (Siaalpha2,3Galbeta1,4GlcNAcalpha2,8-sialyltransferase ), both of which exhibit activity toward glycolipids.
T4 558-684 Sentence denotes The predicted amino acid sequence of ST8Sia V shows 36.1% and 15.0% identity to those of mouse ST8Sia I and III, respectively.
T5 685-891 Sentence denotes The recombinant protein A-fused ST8Sia V expressed in COS-7 cells exhibited an alpha2, 8-sialyltransferase activity toward GM1b, GD1a, GT1b, and GD3, and synthesized GD1c, GT1a, GQ1b, and GT3, respectively.
T6 892-994 Sentence denotes The apparent Km values for GM1b, GD1a, GT1b and GD3 were 1.1, 0.082, 0.070, and 0.28 mM, respectively.
T7 995-1049 Sentence denotes However, ST8Sia V did not exhibit activity toward GM3.
T8 1050-1181 Sentence denotes Thus, the substrate specificity of ST8Sia V is different from those of ST8Sia I and III, both of which exhibit activity toward GM3.
T9 1182-1464 Sentence denotes Transfection of the ST8Sia V gene into COS-7 cells, which express GD1a as a major glycolipid, led to the expression of determinants for monoclonal antibody 4F10, which recognizes GT1a and GQ1b, suggesting that ST8Sia V exhibits activity toward gangliosides GD1a and/or GT1b in vivo.
T10 1465-1626 Sentence denotes The expression of the ST8Sia V gene was tissue- and developmental stage-specific, and was clearly different from those of other alpha2,8-sialyltransferase genes.
T11 1627-1727 Sentence denotes The ST8Sia V gene was strongly expressed in the brain and weakly in other tissues such as the liver.
T12 1728-1798 Sentence denotes In addition, its expression was greater in the adult than fetal brain.
T13 1799-1950 Sentence denotes These results strongly indicate that ST8Sia V is a candidate for SAT-V, the alpha2,8-sialyltransferase involved in GD1c, GT1a, GQ1b, and GT3 synthesis.
T1 0-90 Sentence denotes Molecular cloning and expression of a fifth type of alpha2,8-sialyltransferase (ST8Sia V).
T2 91-192 Sentence denotes Its substrate specificity is similar to that of SAT-V/III, which synthesize GD1c, GT1a, GQ1b and GT3.
T3 193-557 Sentence denotes The cDNAs encoding a new alpha2,8-sialyltransferase (ST8Sia V) were cloned from a mouse brain cDNA library by means of a polymerase chain reaction-based method using the nucleotide sequence information on mouse ST8Sia I (GD3 synthase) and mouse ST8Sia III (Siaalpha2,3Galbeta1,4GlcNAcalpha2,8-sialyltransferase ), both of which exhibit activity toward glycolipids.
T4 558-684 Sentence denotes The predicted amino acid sequence of ST8Sia V shows 36.1% and 15.0% identity to those of mouse ST8Sia I and III, respectively.
T5 685-891 Sentence denotes The recombinant protein A-fused ST8Sia V expressed in COS-7 cells exhibited an alpha2, 8-sialyltransferase activity toward GM1b, GD1a, GT1b, and GD3, and synthesized GD1c, GT1a, GQ1b, and GT3, respectively.
T6 892-994 Sentence denotes The apparent Km values for GM1b, GD1a, GT1b and GD3 were 1.1, 0.082, 0.070, and 0.28 mM, respectively.
T7 995-1049 Sentence denotes However, ST8Sia V did not exhibit activity toward GM3.
T8 1050-1181 Sentence denotes Thus, the substrate specificity of ST8Sia V is different from those of ST8Sia I and III, both of which exhibit activity toward GM3.
T9 1182-1464 Sentence denotes Transfection of the ST8Sia V gene into COS-7 cells, which express GD1a as a major glycolipid, led to the expression of determinants for monoclonal antibody 4F10, which recognizes GT1a and GQ1b, suggesting that ST8Sia V exhibits activity toward gangliosides GD1a and/or GT1b in vivo.
T10 1465-1626 Sentence denotes The expression of the ST8Sia V gene was tissue- and developmental stage-specific, and was clearly different from those of other alpha2,8-sialyltransferase genes.
T11 1627-1727 Sentence denotes The ST8Sia V gene was strongly expressed in the brain and weakly in other tissues such as the liver.
T12 1728-1798 Sentence denotes In addition, its expression was greater in the adult than fetal brain.
T13 1799-1950 Sentence denotes These results strongly indicate that ST8Sia V is a candidate for SAT-V, the alpha2,8-sialyltransferase involved in GD1c, GT1a, GQ1b, and GT3 synthesis.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-90 Sentence denotes Molecular cloning and expression of a fifth type of alpha2,8-sialyltransferase (ST8Sia V).
T2 91-192 Sentence denotes Its substrate specificity is similar to that of SAT-V/III, which synthesize GD1c, GT1a, GQ1b and GT3.
T3 193-557 Sentence denotes The cDNAs encoding a new alpha2,8-sialyltransferase (ST8Sia V) were cloned from a mouse brain cDNA library by means of a polymerase chain reaction-based method using the nucleotide sequence information on mouse ST8Sia I (GD3 synthase) and mouse ST8Sia III (Siaalpha2,3Galbeta1,4GlcNAcalpha2,8-sialyltransferase ), both of which exhibit activity toward glycolipids.
T4 558-684 Sentence denotes The predicted amino acid sequence of ST8Sia V shows 36.1% and 15.0% identity to those of mouse ST8Sia I and III, respectively.
T5 685-891 Sentence denotes The recombinant protein A-fused ST8Sia V expressed in COS-7 cells exhibited an alpha2, 8-sialyltransferase activity toward GM1b, GD1a, GT1b, and GD3, and synthesized GD1c, GT1a, GQ1b, and GT3, respectively.
T6 892-994 Sentence denotes The apparent Km values for GM1b, GD1a, GT1b and GD3 were 1.1, 0.082, 0.070, and 0.28 mM, respectively.
T7 995-1049 Sentence denotes However, ST8Sia V did not exhibit activity toward GM3.
T8 1050-1181 Sentence denotes Thus, the substrate specificity of ST8Sia V is different from those of ST8Sia I and III, both of which exhibit activity toward GM3.
T9 1182-1464 Sentence denotes Transfection of the ST8Sia V gene into COS-7 cells, which express GD1a as a major glycolipid, led to the expression of determinants for monoclonal antibody 4F10, which recognizes GT1a and GQ1b, suggesting that ST8Sia V exhibits activity toward gangliosides GD1a and/or GT1b in vivo.
T10 1465-1626 Sentence denotes The expression of the ST8Sia V gene was tissue- and developmental stage-specific, and was clearly different from those of other alpha2,8-sialyltransferase genes.
T11 1627-1727 Sentence denotes The ST8Sia V gene was strongly expressed in the brain and weakly in other tissues such as the liver.
T12 1728-1798 Sentence denotes In addition, its expression was greater in the adult than fetal brain.
T13 1799-1950 Sentence denotes These results strongly indicate that ST8Sia V is a candidate for SAT-V, the alpha2,8-sialyltransferase involved in GD1c, GT1a, GQ1b, and GT3 synthesis.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T24 1926-1930 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T25 1936-1939 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T1 173-177 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF
T2 179-183 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T3 188-191 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T4 414-417 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T5 808-812 Glycan denotes GM1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G03277YI
T6 814-818 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T7 820-824 Glycan denotes GT1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN
T8 830-833 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T9 857-861 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF
T10 863-867 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T11 873-876 Glycan denotes GT3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G93899SO
T12 919-923 Glycan denotes GM1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G03277YI
T13 925-929 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T14 931-935 Glycan denotes GT1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN
T15 940-943 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T16 1045-1048 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T17 1177-1180 Glycan denotes GM3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G91237TK
T18 1248-1252 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T19 1361-1365 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF
T20 1370-1374 Glycan denotes GQ1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G18625KA
T21 1439-1443 Glycan denotes GD1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G46677TE
T22 1451-1455 Glycan denotes GT1b https://api.glycosmos.org/wurcs2image/latest/png/binary/G40183QN
T23 1920-1924 Glycan denotes GT1a https://api.glycosmos.org/wurcs2image/latest/png/binary/G68110IF

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 173-177 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T2 179-183 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T3 188-191 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070
T4 808-812 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1b http://www.glycoepitope.jp/epitopes/EP0048
T5 814-818 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T6 820-824 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1b http://www.glycoepitope.jp/epitopes/EP0067
T7 857-861 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T8 863-867 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T9 873-876 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070
T10 919-923 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1b http://www.glycoepitope.jp/epitopes/EP0048
T11 925-929 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T12 931-935 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1b http://www.glycoepitope.jp/epitopes/EP0067
T13 1248-1252 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T14 1361-1365 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T15 1370-1374 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T16 1439-1443 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GD1a http://www.glycoepitope.jp/epitopes/EP0056
T17 1451-1455 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1b http://www.glycoepitope.jp/epitopes/EP0067
T18 1920-1924 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT1a http://www.glycoepitope.jp/epitopes/EP0066
T19 1926-1930 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GQ1b http://www.glycoepitope.jp/epitopes/EP0069
T20 1936-1939 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GT3 http://www.glycoepitope.jp/epitopes/EP0070

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 275-280 OrganismTaxon denotes mouse 10088|10090
T3 398-403 OrganismTaxon denotes mouse 10088|10090
T5 432-437 OrganismTaxon denotes mouse 10088|10090
T7 647-652 OrganismTaxon denotes mouse 10088|10090

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 281-286 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T3 1505-1511 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T4 1675-1680 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T6 1721-1726 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T7 1792-1797 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636