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PubMed:8389085 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 23-45 DNA denotes Epstein-Barr viral DNA
T2 49-74 cell_line denotes lymphoblastoid cell lines
T3 104-109 protein denotes BZLF1
T4 186-211 cell_line denotes lymphoblastoid cell lines
T5 363-388 DNA denotes BRLF1/BZLF1 coding region
T6 396-419 DNA denotes P3HR-1 defective genome
T7 495-517 DNA denotes Epstein-Barr viral DNA
T8 525-550 cell_line denotes lytic cycle-induced cells
T9 702-709 DNA denotes EBV DNA
T10 748-760 DNA denotes episomal DNA
T11 764-787 DNA denotes concatameric linear DNA
T12 873-887 DNA denotes linear EBV DNA
T13 1128-1135 DNA denotes EBV DNA
T14 1141-1177 DNA denotes concatenated linear EBV DNA molecule
T15 1262-1269 DNA denotes EBV DNA

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-110 Sentence denotes A concatenated form of Epstein-Barr viral DNA in lymphoblastoid cell lines induced by transfection with BZLF1.
S2 111-279 Sentence denotes The replicative form of Epstein-Barr virus (EBV) DNA was studied using two lymphoblastoid cell lines, X50-7 and 6F11, which are latently infected by Epstein-Barr virus.
S3 280-420 Sentence denotes The lytic cycle of EBV infection was induced by transfection of the cells with the BRLF1/BZLF1 coding region of the P3HR-1 defective genome.
S4 421-551 Sentence denotes We combined two techniques to identify the productive replicative form of Epstein-Barr viral DNA in the lytic cycle-induced cells.
S5 552-710 Sentence denotes Restriction enzyme analysis followed by Southern blot hybridization identified a significant increase in the fused fragment encompassing both ends of EBV DNA.
S6 711-788 Sentence denotes This indicates an increase in either episomal DNA or concatameric linear DNA.
S7 789-1033 Sentence denotes Southern blot analysis of in situ lysing gels revealed that the cellular content of linear EBV DNA was also increased significantly after the initiation of the viral lytic cycle, while the amount of circular DNA remained approximately constant.
S8 1034-1301 Sentence denotes We propose from these results that the source of the fused fragment encompassing both ends of EBV DNA is a concatenated linear EBV DNA molecule, and that such a concatenated molecule most likely represents a replicative form of EBV DNA in productively infected cells.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 23-45 NP denotes Epstein-Barr viral DNA
C3 135-159 NP denotes Epstein-Barr virus (EBV)
C2 135-163 NP denotes Epstein-Barr virus (EBV) DNA
C4 182-211 NP denotes two lymphoblastoid cell lines
C5 213-227 NP denotes X50-7 and 6F11
C6 229-234 NP denotes which
C7 260-278 NP denotes Epstein-Barr virus
C8 495-517 NP denotes Epstein-Barr viral DNA
C9 702-709 NP denotes EBV DNA
C10 1128-1135 NP denotes EBV DNA
C11 1139-1177 NP denotes a concatenated linear EBV DNA molecule
C12 1188-1216 NP denotes such a concatenated molecule
C13 1262-1269 NP denotes EBV DNA
R1 C2 C1 coref-ident Epstein-Barr virus (EBV) DNA,Epstein-Barr viral DNA
R2 C5 C4 coref-appos X50-7 and 6F11,two lymphoblastoid cell lines
R3 C6 C5 coref-relat which,X50-7 and 6F11
R4 C7 C3 coref-ident Epstein-Barr virus,Epstein-Barr virus (EBV)
R5 C8 C2 coref-ident Epstein-Barr viral DNA,Epstein-Barr virus (EBV) DNA
R6 C9 C3 coref-ident EBV DNA,Epstein-Barr virus (EBV)
R7 C10 C9 coref-ident EBV DNA,EBV DNA
R8 C12 C11 coref-ident such a concatenated molecule,a concatenated linear EBV DNA molecule
R9 C13 C10 coref-ident EBV DNA,EBV DNA

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 23-45 DNA_family_or_group denotes Epstein-Barr viral DNA
T2 49-74 cell_line denotes lymphoblastoid cell lines
T3 104-109 protein_molecule denotes BZLF1
T4 135-153 virus denotes Epstein-Barr virus
T5 155-158 virus denotes EBV
T6 186-211 cell_line denotes lymphoblastoid cell lines
T7 260-278 virus denotes Epstein-Barr virus
T8 299-302 virus denotes EBV
T9 363-388 DNA_domain_or_region denotes BRLF1/BZLF1 coding region
T10 396-419 DNA_molecule denotes P3HR-1 defective genome
T11 495-517 DNA_family_or_group denotes Epstein-Barr viral DNA
T12 525-550 cell_line denotes lytic cycle-induced cells
T13 592-619 other_name denotes Southern blot hybridization
T14 702-709 DNA_family_or_group denotes EBV DNA
T15 748-760 DNA_family_or_group denotes episomal DNA
T16 764-787 DNA_family_or_group denotes concatameric linear DNA
T17 789-811 other_name denotes Southern blot analysis
T18 818-834 other_name denotes situ lysing gels
T19 873-879 DNA_family_or_group denotes linear
T20 880-887 DNA_family_or_group denotes EBV DNA
T21 949-966 other_name denotes viral lytic cycle
T22 1128-1135 DNA_family_or_group denotes EBV DNA
T23 1141-1177 DNA_molecule denotes concatenated linear EBV DNA molecule
T24 1262-1269 DNA_family_or_group denotes EBV DNA