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PubMed:838741 JSONTXT

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Test-Species-PubTator

Id Subject Object Predicate Lexical cue resolved_to
2 0-22 Chemical denotes Methylated nucleosides -
3 43-48 Species denotes mouse 10090
33 76-83 Chemical denotes Poly(A) MESH:D011061
34 114-135 Chemical denotes [methyl-3H]methionine -
35 210-216 Disease denotes anemic
36 217-221 Species denotes mice 10090
37 271-278 Chemical denotes poly(A) MESH:D011061
38 377-390 Chemical denotes DEAE-Sephadex MESH:D003637
39 558-563 Gene denotes Cap 1 12331
40 575-580 Gene denotes Cap 2 67252
41 714-731 Chemical denotes 6-methyladenosine MESH:C010223
42 903-912 Chemical denotes phosphate MESH:D010710
43 986-1013 Chemical denotes withpenicillium P1 nuclease -
44 1049-1051 Chemical denotes P1 MESH:C480041
45 1121-1140 Chemical denotes 2'-O-methylcytidine MESH:C052203
46 1142-1144 Chemical denotes Cm -
47 1213-1215 Chemical denotes P1 MESH:C480041
48 1266-1279 Chemical denotes DEAE-Sephadex MESH:D003637
49 1304-1316 Chemical denotes m2G5'ppp5'Am -
50 1379-1397 Chemical denotes 5'-5'-triphosphate -
51 1485-1490 Gene denotes Cap 1 12331
52 1495-1500 Gene denotes Cap 2 67252
53 1604-1621 Chemical denotes 7-methyiguanosine -
54 1623-1626 Chemical denotes m7G MESH:C016578
55 1636-1659 Chemical denotes dimethylated nucleoside -
56 1660-1689 Chemical denotes 6-methyl-2'-O-methyladenosine -
57 1691-1696 Chemical denotes N6mAm -
58 1743-1752 Chemical denotes adenosine MESH:D000241
59 1754-1774 Chemical denotes 2'-O-methyladenosine MESH:C024341
60 1832-1854 Chemical denotes methylated nucleosides -
61 1908-1913 Chemical denotes N6mAm -

Test-Species-PubDictionaries

Id Subject Object Predicate Lexical cue db_id
T1 43-48 OrganismTaxon denotes mouse 10088|10090
T3 217-221 OrganismTaxon denotes mice 10088

Test-Species-PubDictionaries-PubMedBERT

Id Subject Object Predicate Lexical cue db_id
T1 43-48 Species denotes mouse 10088|10090
T3 210-216 Species denotes anemic 1912880
T4 217-221 Species denotes mice 10088
T5 377-381 Species denotes DEAE 2868694
T6 391-397 Species denotes column 48766
T7 1266-1270 Species denotes DEAE 2868694
T8 1784-1788 Species denotes also 209674

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1115-1122 Glycan_Motif denotes core, 2 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00033MO

sentences

Id Subject Object Predicate Lexical cue
T1 0-75 Sentence denotes Methylated nucleosides in globin mRNA from mouse nucleated erythroid cells.
T2 76-222 Sentence denotes Poly(A)-containing mRNAs labeled with [methyl-3H]methionine were isolated from nucleated erythroid cells obtained from the spleens of anemic mice.
T3 223-376 Sentence denotes The RNAs were further separated into non-globin poly(A)-containing RNAs and highly purified globin mRNA by globin cDNA-cellulose affinity chromatography.
T4 377-582 Sentence denotes DEAE-Sephadex column chromatography of the T2 ribonuclease digestion products of the cDNA-purified globin mRNA fraction yielded methylated resistant fragments with charges of -4.7 (Cap 1) and -5.3 (Cap 2).
T5 583-746 Sentence denotes Digestion of the non-globin RNA fraction revealed a similar pattern with the addition of a methylated mononucleotide identified as 6-methyladenosine at -2 charges.
T6 747-913 Sentence denotes Alkaline phosphatase treatment of the T2 resistant fragments reduced their charges by approximately 2, which is consistent with the removal of one terminal phosphate.
T7 914-1095 Sentence denotes Treatment of the globin T2 and alkaline phosphatase-resistant fragments withpenicillium P1 nuclease and alkaline phosphatase yielded a P1-resistant core structure in both fragments.
T8 1096-1208 Sentence denotes In addition to the core, 2'-O-methylcytidine (Cm) was released from the more negatively charged globin fragment.
T9 1209-1406 Sentence denotes The P1-resistant cores of the cap structures eluted from DEAE-Sephadex with the known standard m2G5'ppp5'Am and were found to be pyrophosphatase-sensitive establishing a 5'-5'-triphosphate linkage.
T10 1407-1698 Sentence denotes The pyrophosphatase and alkaline phosphatase digestion products of the globin Cap 1 and Cap 2 core structures were analyzed by high voltage electrophoresis and paper chromatography and found to be 7-methyiguanosine (m7G) and the dimethylated nucleoside 6-methyl-2'-O-methyladenosine (N6mAm).
T11 1699-1798 Sentence denotes A small amount of the singularly methylated adenosine, 2'-O-methyladenosine (Am) was also observed.
T12 1799-1937 Sentence denotes The predominant sequences of the methylated nucleosides in the globin cap structures are therefore m7G5'ppp5'N6mAm and m7G5'ppp5'N6mAmpCm.
T1 0-75 Sentence denotes Methylated nucleosides in globin mRNA from mouse nucleated erythroid cells.
T2 76-222 Sentence denotes Poly(A)-containing mRNAs labeled with [methyl-3H]methionine were isolated from nucleated erythroid cells obtained from the spleens of anemic mice.
T3 223-376 Sentence denotes The RNAs were further separated into non-globin poly(A)-containing RNAs and highly purified globin mRNA by globin cDNA-cellulose affinity chromatography.
T4 377-582 Sentence denotes DEAE-Sephadex column chromatography of the T2 ribonuclease digestion products of the cDNA-purified globin mRNA fraction yielded methylated resistant fragments with charges of -4.7 (Cap 1) and -5.3 (Cap 2).
T5 583-746 Sentence denotes Digestion of the non-globin RNA fraction revealed a similar pattern with the addition of a methylated mononucleotide identified as 6-methyladenosine at -2 charges.
T6 747-913 Sentence denotes Alkaline phosphatase treatment of the T2 resistant fragments reduced their charges by approximately 2, which is consistent with the removal of one terminal phosphate.
T7 914-1095 Sentence denotes Treatment of the globin T2 and alkaline phosphatase-resistant fragments withpenicillium P1 nuclease and alkaline phosphatase yielded a P1-resistant core structure in both fragments.
T8 1096-1208 Sentence denotes In addition to the core, 2'-O-methylcytidine (Cm) was released from the more negatively charged globin fragment.
T9 1209-1406 Sentence denotes The P1-resistant cores of the cap structures eluted from DEAE-Sephadex with the known standard m2G5'ppp5'Am and were found to be pyrophosphatase-sensitive establishing a 5'-5'-triphosphate linkage.
T10 1407-1698 Sentence denotes The pyrophosphatase and alkaline phosphatase digestion products of the globin Cap 1 and Cap 2 core structures were analyzed by high voltage electrophoresis and paper chromatography and found to be 7-methyiguanosine (m7G) and the dimethylated nucleoside 6-methyl-2'-O-methyladenosine (N6mAm).
T11 1699-1798 Sentence denotes A small amount of the singularly methylated adenosine, 2'-O-methyladenosine (Am) was also observed.
T12 1799-1937 Sentence denotes The predominant sequences of the methylated nucleosides in the globin cap structures are therefore m7G5'ppp5'N6mAm and m7G5'ppp5'N6mAmpCm.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 199-206 http://purl.obolibrary.org/obo/MAT_0000085 denotes spleens

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 1115-1122 Glycan denotes core, 2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00033MO

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 199-206 Body_part denotes spleens http://purl.obolibrary.org/obo/MAT_0000085

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 1115-1122 Glycan denotes core, 2 https://api.glycosmos.org/wurcs2image/latest/png/binary/G00033MO

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 76-80 Cell denotes Poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775
T3 271-275 Cell denotes poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775
T5 558-563 Cell denotes Cap 1 http://purl.obolibrary.org/obo/CL:4028002
T6 1485-1490 Cell denotes Cap 1 http://purl.obolibrary.org/obo/CL:4028002

Organism-PubDic

Id Subject Object Predicate Lexical cue db_id
T1 43-48 Species denotes mouse 10088|10090
T3 217-221 Species denotes mice 10088

Organism-PubTator

Id Subject Object Predicate Lexical cue db_id
3 43-48 Species denotes mouse 10090
36 217-221 Species denotes mice 10090

Organism-PubDic-Bert-9

Id Subject Object Predicate Lexical cue db_id
T1 43-48 Species denotes mouse 10088|10090
T3 217-221 Species denotes mice 10088

Organism-PubDic-Bert-8

Id Subject Object Predicate Lexical cue db_id
T1 43-48 Species denotes mouse 10088|10090
T3 210-216 Species denotes anemic 1912880
T4 217-221 Species denotes mice 10088
T5 377-381 Species denotes DEAE 2868694
T6 391-397 Species denotes column 48766
T7 1266-1270 Species denotes DEAE 2868694
T8 1784-1788 Species denotes also 209674

Organism-Gold

Id Subject Object Predicate Lexical cue db_id
T1 43-48 Species denotes mouse 10088|10090
T3 217-221 Species denotes mice 10088

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 199-206 Body_part denotes spleens http://purl.obolibrary.org/obo/UBERON_0002106

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 43-48 Organism denotes mouse 10088|10090
T3 217-221 Organism denotes mice 10088

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-75 Sentence denotes Methylated nucleosides in globin mRNA from mouse nucleated erythroid cells.
T2 76-222 Sentence denotes Poly(A)-containing mRNAs labeled with [methyl-3H]methionine were isolated from nucleated erythroid cells obtained from the spleens of anemic mice.
T3 223-376 Sentence denotes The RNAs were further separated into non-globin poly(A)-containing RNAs and highly purified globin mRNA by globin cDNA-cellulose affinity chromatography.
T4 377-582 Sentence denotes DEAE-Sephadex column chromatography of the T2 ribonuclease digestion products of the cDNA-purified globin mRNA fraction yielded methylated resistant fragments with charges of -4.7 (Cap 1) and -5.3 (Cap 2).
T5 583-746 Sentence denotes Digestion of the non-globin RNA fraction revealed a similar pattern with the addition of a methylated mononucleotide identified as 6-methyladenosine at -2 charges.
T6 747-913 Sentence denotes Alkaline phosphatase treatment of the T2 resistant fragments reduced their charges by approximately 2, which is consistent with the removal of one terminal phosphate.
T7 914-1095 Sentence denotes Treatment of the globin T2 and alkaline phosphatase-resistant fragments withpenicillium P1 nuclease and alkaline phosphatase yielded a P1-resistant core structure in both fragments.
T8 1096-1208 Sentence denotes In addition to the core, 2'-O-methylcytidine (Cm) was released from the more negatively charged globin fragment.
T9 1209-1406 Sentence denotes The P1-resistant cores of the cap structures eluted from DEAE-Sephadex with the known standard m2G5'ppp5'Am and were found to be pyrophosphatase-sensitive establishing a 5'-5'-triphosphate linkage.
T10 1407-1698 Sentence denotes The pyrophosphatase and alkaline phosphatase digestion products of the globin Cap 1 and Cap 2 core structures were analyzed by high voltage electrophoresis and paper chromatography and found to be 7-methyiguanosine (m7G) and the dimethylated nucleoside 6-methyl-2'-O-methyladenosine (N6mAm).
T11 1699-1798 Sentence denotes A small amount of the singularly methylated adenosine, 2'-O-methyladenosine (Am) was also observed.
T12 1799-1937 Sentence denotes The predominant sequences of the methylated nucleosides in the globin cap structures are therefore m7G5'ppp5'N6mAm and m7G5'ppp5'N6mAmpCm.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 43-48 OrganismTaxon denotes mouse 10088|10090
T3 217-221 OrganismTaxon denotes mice 10088

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 59-74 Body_part denotes erythroid cells FMA:83516
T2 165-180 Body_part denotes erythroid cells FMA:83516
T3 199-206 Body_part denotes spleens FMA:7196

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 199-206 Body_part denotes spleens http://purl.obolibrary.org/obo/MAT_0000085

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 199-206 Body_part denotes spleens http://purl.obolibrary.org/obo/UBERON_0002106

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 76-80 Cell denotes Poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775
T3 271-275 Cell denotes poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775
T5 558-563 Cell denotes Cap 1 http://purl.obolibrary.org/obo/CL:4028002
T6 1485-1490 Cell denotes Cap 1 http://purl.obolibrary.org/obo/CL:4028002