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PubMed:7901202 JSONTXT

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GlyCosmos15-Species

Id Subject Object Predicate Lexical cue db_id
9 182-187 Species denotes human 9606
10 380-385 Species denotes human 9606
13 435-453 Species denotes Epstein-Barr virus 10376

ggdb-test

Id Subject Object Predicate Lexical cue
T1 285-292 https://acgg.asia/db/ggdb/info/gg003 denotes Lewis x
T2 285-292 https://acgg.asia/db/ggdb/info/gg004 denotes Lewis x
T3 285-292 https://acgg.asia/db/ggdb/info/gg005 denotes Lewis x
T4 285-292 https://acgg.asia/db/ggdb/info/gg006 denotes Lewis x
T5 285-292 https://acgg.asia/db/ggdb/info/gg007 denotes Lewis x
T6 285-292 https://acgg.asia/db/ggdb/info/gg008 denotes Lewis x
T7 953-960 https://acgg.asia/db/ggdb/info/gg003 denotes Lewis x
T8 953-960 https://acgg.asia/db/ggdb/info/gg004 denotes Lewis x
T9 953-960 https://acgg.asia/db/ggdb/info/gg005 denotes Lewis x
T10 953-960 https://acgg.asia/db/ggdb/info/gg006 denotes Lewis x
T11 953-960 https://acgg.asia/db/ggdb/info/gg007 denotes Lewis x
T12 953-960 https://acgg.asia/db/ggdb/info/gg008 denotes Lewis x
T13 1577-1584 https://acgg.asia/db/ggdb/info/gg003 denotes Lewis x
T14 1577-1584 https://acgg.asia/db/ggdb/info/gg004 denotes Lewis x
T15 1577-1584 https://acgg.asia/db/ggdb/info/gg005 denotes Lewis x
T16 1577-1584 https://acgg.asia/db/ggdb/info/gg006 denotes Lewis x
T17 1577-1584 https://acgg.asia/db/ggdb/info/gg007 denotes Lewis x
T18 1577-1584 https://acgg.asia/db/ggdb/info/gg008 denotes Lewis x

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 278-292 Glycan_Motif denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO
T2 285-292 Glycan_Motif denotes Lewis x https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T4 772-781 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T6 946-960 Glycan_Motif denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO
T7 953-960 Glycan_Motif denotes Lewis x https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO
T9 1570-1584 Glycan_Motif denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO
T10 1577-1584 Glycan_Motif denotes Lewis x https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G01187XC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00051MO

GGDB-2020

Id Subject Object Predicate Lexical cue
T1 285-292 https://acgg.asia/db/ggdb/info/gg004 denotes Lewis x
T2 285-292 https://acgg.asia/db/ggdb/info/gg005 denotes Lewis x
T3 285-292 https://acgg.asia/db/ggdb/info/gg006 denotes Lewis x
T4 285-292 https://acgg.asia/db/ggdb/info/gg007 denotes Lewis x
T5 285-292 https://acgg.asia/db/ggdb/info/gg008 denotes Lewis x
T6 285-292 https://acgg.asia/db/ggdb/info/gg003 denotes Lewis x
T7 953-960 https://acgg.asia/db/ggdb/info/gg004 denotes Lewis x
T8 953-960 https://acgg.asia/db/ggdb/info/gg005 denotes Lewis x
T9 953-960 https://acgg.asia/db/ggdb/info/gg006 denotes Lewis x
T10 953-960 https://acgg.asia/db/ggdb/info/gg007 denotes Lewis x
T11 953-960 https://acgg.asia/db/ggdb/info/gg008 denotes Lewis x
T12 953-960 https://acgg.asia/db/ggdb/info/gg003 denotes Lewis x
T13 1577-1584 https://acgg.asia/db/ggdb/info/gg004 denotes Lewis x
T14 1577-1584 https://acgg.asia/db/ggdb/info/gg005 denotes Lewis x
T15 1577-1584 https://acgg.asia/db/ggdb/info/gg006 denotes Lewis x
T16 1577-1584 https://acgg.asia/db/ggdb/info/gg007 denotes Lewis x
T17 1577-1584 https://acgg.asia/db/ggdb/info/gg008 denotes Lewis x
T18 1577-1584 https://acgg.asia/db/ggdb/info/gg003 denotes Lewis x

sentences

Id Subject Object Predicate Lexical cue
T1 0-118 Sentence denotes Expression cloning of a novel Gal beta (1-3/1-4) GlcNAc alpha 2,3-sialyltransferase using lectin resistance selection.
T2 119-357 Sentence denotes This report describes the isolation of a cDNA encoding a novel human Gal beta (1-3/1-4)GlcNac alpha 2,3-sialyl-transferase involved in the biosynthesis of the sialyl Lewis x determinant (NeuAc alpha 2-3 Gal beta 1-4(Fuc alpha 1-3)GlcNAc).
T3 358-475 Sentence denotes A cDNA library of the human melanoma cell line WM266-4 was constructed in an Epstein-Barr virus-based cloning vector.
T4 476-726 Sentence denotes Selection of the B-cell line Namalwa expressing transfected cDNAs in the presence of the cytotoxic lectin Ricinus communis agglutinin 120 gave a cDNA encoding a protein with type II transmembrane topology, as found for mammalian glycosyltransferases.
T5 727-1049 Sentence denotes The use of this lectin, which is specific to galactose residues (especially the Gal beta 1-4GlcNAc structure), originates from our prediction that the modification of the Gal beta 1-4GlcNAc structure (a backbone of the sialyl Lewis x structure) by glycosyltransferases may increase the levels of resistance to this lectin.
T6 1050-1193 Sentence denotes Comparison of this cDNA sequence with those of three other cloned sialyltransferases revealed two conserved regions shared by all four enzymes.
T7 1194-1492 Sentence denotes Expression of the COOH-terminal catalytic domain of this protein showed alpha 2,3-sialyltransferase activity with substrate specificity different from that of CMP-N-acetylneuraminate:N-acetyllactosaminide alpha-2,3-sialyltransferase (Gal-beta 1-3(4)GlcNAc alpha 2,3-sialyltransferase, EC 2.4.99.6).
T8 1493-1594 Sentence denotes Furthermore, expression of this cDNA in Namalwa cells increased the level of sialyl Lewis x antigens.
T9 1595-1730 Sentence denotes The cloning approach based on lectin resistance may be useful for the isolation of cDNAs encoding other mammalian glycosyltransferases.
T1 0-118 Sentence denotes Expression cloning of a novel Gal beta (1-3/1-4) GlcNAc alpha 2,3-sialyltransferase using lectin resistance selection.
T2 119-357 Sentence denotes This report describes the isolation of a cDNA encoding a novel human Gal beta (1-3/1-4)GlcNac alpha 2,3-sialyl-transferase involved in the biosynthesis of the sialyl Lewis x determinant (NeuAc alpha 2-3 Gal beta 1-4(Fuc alpha 1-3)GlcNAc).
T3 358-475 Sentence denotes A cDNA library of the human melanoma cell line WM266-4 was constructed in an Epstein-Barr virus-based cloning vector.
T4 476-726 Sentence denotes Selection of the B-cell line Namalwa expressing transfected cDNAs in the presence of the cytotoxic lectin Ricinus communis agglutinin 120 gave a cDNA encoding a protein with type II transmembrane topology, as found for mammalian glycosyltransferases.
T5 727-1049 Sentence denotes The use of this lectin, which is specific to galactose residues (especially the Gal beta 1-4GlcNAc structure), originates from our prediction that the modification of the Gal beta 1-4GlcNAc structure (a backbone of the sialyl Lewis x structure) by glycosyltransferases may increase the levels of resistance to this lectin.
T6 1050-1193 Sentence denotes Comparison of this cDNA sequence with those of three other cloned sialyltransferases revealed two conserved regions shared by all four enzymes.
T7 1194-1492 Sentence denotes Expression of the COOH-terminal catalytic domain of this protein showed alpha 2,3-sialyltransferase activity with substrate specificity different from that of CMP-N-acetylneuraminate:N-acetyllactosaminide alpha-2,3-sialyltransferase (Gal-beta 1-3(4)GlcNAc alpha 2,3-sialyltransferase, EC 2.4.99.6).
T8 1493-1594 Sentence denotes Furthermore, expression of this cDNA in Namalwa cells increased the level of sialyl Lewis x antigens.
T9 1595-1730 Sentence denotes The cloning approach based on lectin resistance may be useful for the isolation of cDNAs encoding other mammalian glycosyltransferases.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 278-292 https://glytoucan.org/Structures/Glycans/G00054MO denotes sialyl Lewis x
T2 285-292 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis x
T3 285-292 https://glytoucan.org/Structures/Glycans/G01187XC denotes Lewis x
T4 772-781 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T5 772-781 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T6 946-960 https://glytoucan.org/Structures/Glycans/G00054MO denotes sialyl Lewis x
T7 953-960 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis x
T8 953-960 https://glytoucan.org/Structures/Glycans/G01187XC denotes Lewis x
T9 1570-1584 https://glytoucan.org/Structures/Glycans/G00054MO denotes sialyl Lewis x
T10 1577-1584 https://glytoucan.org/Structures/Glycans/G00051MO denotes Lewis x
T11 1577-1584 https://glytoucan.org/Structures/Glycans/G01187XC denotes Lewis x

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 278-292 http://www.glycoepitope.jp/epitopes/EP0012 denotes sialyl Lewis x
T2 285-292 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis x
T3 946-960 http://www.glycoepitope.jp/epitopes/EP0012 denotes sialyl Lewis x
T4 953-960 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis x
T5 1570-1584 http://www.glycoepitope.jp/epitopes/EP0012 denotes sialyl Lewis x
T6 1577-1584 http://www.glycoepitope.jp/epitopes/EP0011 denotes Lewis x

glycogenes

Id Subject Object Predicate Lexical cue
PD-GlycoGenes20190927-B_T1 655-657 https://acgg.asia/db/ggdb/info/gg111 denotes II

NGLY1-deficiency

Id Subject Object Predicate Lexical cue
PD-NGLY1-deficiency-B_T1 49-55 chem:24139 denotes GlcNAc
PD-NGLY1-deficiency-B_T2 206-212 chem:24139 denotes GlcNac
PD-NGLY1-deficiency-B_T3 349-355 chem:24139 denotes GlcNAc
PD-NGLY1-deficiency-B_T4 1443-1449 chem:24139 denotes GlcNAc

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 278-292 Glycan denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO
T2 306-311 Glycan denotes NeuAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T3 946-960 Glycan denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO
T4 1570-1584 Glycan denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 386-394 Disease denotes melanoma http://purl.obolibrary.org/obo/MONDO_0005105

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 386-394 Phenotype denotes melanoma HP:0002861

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 278-292 Glycan denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO
T2 306-311 Glycan denotes NeuAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T3 946-960 Glycan denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO
T4 1570-1584 Glycan denotes sialyl Lewis x https://api.glycosmos.org/wurcs2image/latest/png/binary/G00054MO

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 386-394 Phenotype denotes melanoma HP:0002861

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 182-187 OrganismTaxon denotes human 9606
T2 380-385 OrganismTaxon denotes human 9606
T3 435-453 OrganismTaxon denotes Epstein-Barr virus 10376
T4 582-598 OrganismTaxon denotes Ricinus communis 3988
T5 695-704 OrganismTaxon denotes mammalian 40674
T6 1699-1708 OrganismTaxon denotes mammalian 40674

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 493-499 Cell denotes B-cell http://purl.obolibrary.org/obo/CL:0000236

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 386-394 Disease denotes melanoma MONDO:0005105

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-118 Sentence denotes Expression cloning of a novel Gal beta (1-3/1-4) GlcNAc alpha 2,3-sialyltransferase using lectin resistance selection.
T2 119-357 Sentence denotes This report describes the isolation of a cDNA encoding a novel human Gal beta (1-3/1-4)GlcNac alpha 2,3-sialyl-transferase involved in the biosynthesis of the sialyl Lewis x determinant (NeuAc alpha 2-3 Gal beta 1-4(Fuc alpha 1-3)GlcNAc).
T3 358-475 Sentence denotes A cDNA library of the human melanoma cell line WM266-4 was constructed in an Epstein-Barr virus-based cloning vector.
T4 476-726 Sentence denotes Selection of the B-cell line Namalwa expressing transfected cDNAs in the presence of the cytotoxic lectin Ricinus communis agglutinin 120 gave a cDNA encoding a protein with type II transmembrane topology, as found for mammalian glycosyltransferases.
T5 727-1049 Sentence denotes The use of this lectin, which is specific to galactose residues (especially the Gal beta 1-4GlcNAc structure), originates from our prediction that the modification of the Gal beta 1-4GlcNAc structure (a backbone of the sialyl Lewis x structure) by glycosyltransferases may increase the levels of resistance to this lectin.
T6 1050-1193 Sentence denotes Comparison of this cDNA sequence with those of three other cloned sialyltransferases revealed two conserved regions shared by all four enzymes.
T7 1194-1492 Sentence denotes Expression of the COOH-terminal catalytic domain of this protein showed alpha 2,3-sialyltransferase activity with substrate specificity different from that of CMP-N-acetylneuraminate:N-acetyllactosaminide alpha-2,3-sialyltransferase (Gal-beta 1-3(4)GlcNAc alpha 2,3-sialyltransferase, EC 2.4.99.6).
T8 1493-1594 Sentence denotes Furthermore, expression of this cDNA in Namalwa cells increased the level of sialyl Lewis x antigens.
T9 1595-1730 Sentence denotes The cloning approach based on lectin resistance may be useful for the isolation of cDNAs encoding other mammalian glycosyltransferases.

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 278-292 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes sialyl Lewis x http://www.glycoepitope.jp/epitopes/EP0012
T2 946-960 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes sialyl Lewis x http://www.glycoepitope.jp/epitopes/EP0012
T3 1570-1584 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes sialyl Lewis x http://www.glycoepitope.jp/epitopes/EP0012

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-118 Sentence denotes Expression cloning of a novel Gal beta (1-3/1-4) GlcNAc alpha 2,3-sialyltransferase using lectin resistance selection.
T2 119-357 Sentence denotes This report describes the isolation of a cDNA encoding a novel human Gal beta (1-3/1-4)GlcNac alpha 2,3-sialyl-transferase involved in the biosynthesis of the sialyl Lewis x determinant (NeuAc alpha 2-3 Gal beta 1-4(Fuc alpha 1-3)GlcNAc).
T3 358-475 Sentence denotes A cDNA library of the human melanoma cell line WM266-4 was constructed in an Epstein-Barr virus-based cloning vector.
T4 476-726 Sentence denotes Selection of the B-cell line Namalwa expressing transfected cDNAs in the presence of the cytotoxic lectin Ricinus communis agglutinin 120 gave a cDNA encoding a protein with type II transmembrane topology, as found for mammalian glycosyltransferases.
T5 727-1049 Sentence denotes The use of this lectin, which is specific to galactose residues (especially the Gal beta 1-4GlcNAc structure), originates from our prediction that the modification of the Gal beta 1-4GlcNAc structure (a backbone of the sialyl Lewis x structure) by glycosyltransferases may increase the levels of resistance to this lectin.
T6 1050-1193 Sentence denotes Comparison of this cDNA sequence with those of three other cloned sialyltransferases revealed two conserved regions shared by all four enzymes.
T7 1194-1492 Sentence denotes Expression of the COOH-terminal catalytic domain of this protein showed alpha 2,3-sialyltransferase activity with substrate specificity different from that of CMP-N-acetylneuraminate:N-acetyllactosaminide alpha-2,3-sialyltransferase (Gal-beta 1-3(4)GlcNAc alpha 2,3-sialyltransferase, EC 2.4.99.6).
T8 1493-1594 Sentence denotes Furthermore, expression of this cDNA in Namalwa cells increased the level of sialyl Lewis x antigens.
T9 1595-1730 Sentence denotes The cloning approach based on lectin resistance may be useful for the isolation of cDNAs encoding other mammalian glycosyltransferases.

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 493-499 Body_part denotes B-cell http://purl.obolibrary.org/obo/CL_0000236
T2 658-671 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T3 930-938 Body_part denotes backbone http://purl.obolibrary.org/obo/UBERON_0001130

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 930-938 Body_part denotes backbone FMA:13478

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 182-187 OrganismTaxon denotes human 9606
T2 380-385 OrganismTaxon denotes human 9606
T3 435-453 OrganismTaxon denotes Epstein-Barr virus 10376
T4 582-598 OrganismTaxon denotes Ricinus communis 3988

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 278-292 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes sialyl Lewis x http://www.glycoepitope.jp/epitopes/EP0012
T2 946-960 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes sialyl Lewis x http://www.glycoepitope.jp/epitopes/EP0012
T3 1570-1584 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes sialyl Lewis x http://www.glycoepitope.jp/epitopes/EP0012

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 493-499 Body_part denotes B-cell http://purl.obolibrary.org/obo/CL_0000236
T2 658-671 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T3 930-938 Body_part denotes backbone http://purl.obolibrary.org/obo/UBERON_0001130

GlyCosmos15-Lectin

Id Subject Object Predicate Lexical cue
T1 582-609 GL_000028 denotes Ricinus communis agglutinin

Lectin_test

Id Subject Object Predicate Lexical cue
T1 582-609 GL_000028 denotes Ricinus communis agglutinin

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 493-499 Cell denotes B-cell http://purl.obolibrary.org/obo/CL:0000236