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PubMed:7862157 JSONTXT

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DisGeNET

Id Subject Object Predicate Lexical cue
T0 1419-1423 gene:861 denotes AML1
T1 1543-1557 disease:C0598766 denotes leukemogenesis
T2 1424-1437 gene:861 denotes PEBP2 alpha B
T3 1543-1557 disease:C0598766 denotes leukemogenesis
R1 T0 T1 associated_with AML1,leukemogenesis
R2 T2 T3 associated_with PEBP2 alpha B,leukemogenesis

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 18-56 DNA denotes Runt domain-encoding PEBP2 alpha genes
T2 60-67 cell_type denotes T cells
T3 99-136 DNA denotes PEBP2 alpha A and PEBP2 alpha B genes
T4 148-167 protein denotes DNA-binding subunit
T5 173-200 protein denotes murine transcription factor
T6 202-207 protein denotes PEBP2
T7 234-275 protein denotes T-cell-specific transcriptional regulator
T8 356-367 protein denotes Runt domain
T9 369-382 protein denotes PEBP2 alpha B
T10 390-408 protein denotes murine counterpart
T11 412-422 protein denotes human AML1
T12 467-506 DNA denotes 8;21 and 3;21 chromosome translocations
T13 715-728 protein denotes PEBP2 alpha A
T14 733-757 protein denotes mouse AML1/PEBP2 alpha B
T15 775-788 cell_type denotes T lymphocytes
T16 1019-1082 cell_type denotes CD4- CD8-, CD4+ CD8+, CD4+ CD8-, and CD4- CD8+ cell populations
T17 1139-1146 cell_type denotes T cells
T18 1204-1209 protein denotes PEBP2
T19 1215-1251 protein denotes T-cell-specific transcription factor
T20 1268-1292 protein denotes mouse AML1/PEBP2 alpha B
T21 1359-1376 cell_type denotes bone marrow cells
T22 1419-1437 protein denotes AML1/PEBP2 alpha B
T23 1452-1471 cell_type denotes hematopoietic cells
T24 1492-1506 cell_type denotes T-cell lineage

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
7862157-10#25#29#gene861 1419-1423 gene861 denotes AML1
7862157-10#30#43#gene861 1424-1437 gene861 denotes PEBP2 alpha B
7862157-10#149#163#diseaseC0598766 1543-1557 diseaseC0598766 denotes leukemogenesis
7862157-3#0#13#gene861 369-382 gene861 denotes PEBP2 alpha B
7862157-3#49#53#gene861 418-422 gene861 denotes AML1
7862157-3#154#176#diseaseC0023467 523-545 diseaseC0023467 denotes acute myeloid leukemia
25#29#gene861149#163#diseaseC0598766 7862157-10#25#29#gene861 7862157-10#149#163#diseaseC0598766 associated_with AML1,leukemogenesis
30#43#gene861149#163#diseaseC0598766 7862157-10#30#43#gene861 7862157-10#149#163#diseaseC0598766 associated_with PEBP2 alpha B,leukemogenesis
0#13#gene861154#176#diseaseC0023467 7862157-3#0#13#gene861 7862157-3#154#176#diseaseC0023467 associated_with PEBP2 alpha B,acute myeloid leukemia
49#53#gene861154#176#diseaseC0023467 7862157-3#49#53#gene861 7862157-3#154#176#diseaseC0023467 associated_with AML1,acute myeloid leukemia

semrep-sample

Id Subject Object Predicate Lexical cue
E1-ti-1 0-10 cui:C0185117 denotes Expression
E2-ti-1 45-50 cui:C0439095 denotes alpha
E3-ti-1 51-56 cui:C0017337 denotes genes
E4-ti-1 60-67 cui:C0039194 denotes T cells
E5-ti-1 75-81 cui:C0040113 denotes thymic
E6-ti-1 82-93 cui:C1527148 denotes development
E1-ab-1 105-110 cui:C0439095 denotes alpha
E2-ab-1 117-130 cui:C0215508 denotes PEBP2 alpha B
E3-ab-1 131-136 cui:C0017337 denotes genes
E4-ab-1 148-159 cui:C1148673 denotes DNA-binding
E5-ab-1 173-179 cui:C0026809 denotes murine
E6-ab-1 180-200 cui:C0040648 denotes transcription factor
E7-ab-1 234-240 cui:C0039194 denotes T-cell
E8-ab-1 250-265 cui:C0040649 denotes transcriptional
T1 173-200 PART_OF denotes murine transcription factor
T2 266-275 AFFECTS denotes regulator
E1-ab-2 283-286 cui:C0205448 denotes two
E2-ab-2 287-294 cui:C1522149 denotes related
E3-ab-2 295-300 cui:C0017337 denotes genes
E4-ab-2 336-342 cui:C0205147 denotes region
E1-ab-3 369-382 cui:C0215508 denotes PEBP2 alpha B
E2-ab-3 390-396 cui:C0026809 denotes murine
E3-ab-3 412-417 cui:C0020114 denotes human
E4-ab-3 418-422 cui:C1335654 denotes AML1
E5-ab-3 481-506 cui:C0040715 denotes chromosome translocations
E6-ab-3 523-545 cui:C0023467 denotes acute myeloid leukemia
T3 412-422 PART_OF denotes human AML1
T4 507-517 ASSOCIATED_WITH denotes associated
E1-ab-4 557-560 cui:C0035668 denotes RNA
E2-ab-4 579-584 cui:C0001675 denotes adult
E3-ab-4 585-590 cui:C0025914 denotes mouse
E4-ab-4 591-598 cui:C0040300 denotes tissues
E5-ab-4 617-623 cui:C0441889 denotes levels
E6-ab-4 627-637 cui:C0185117 denotes expression
E7-ab-4 646-651 cui:C0017337 denotes genes
E8-ab-4 657-661 cui:C0205393 denotes most
E9-ab-4 662-671 cui:C0205402 denotes prominent
T5 585-598 PART_OF denotes mouse tissues
E1-ab-5 700-711 cui:C1519595 denotes transcripts
E2-ab-5 721-726 cui:C0439095 denotes alpha
E3-ab-5 733-738 cui:C0025914 denotes mouse
E4-ab-5 739-743 cui:C1335654 denotes AML1
E5-ab-5 744-757 cui:C0215508 denotes PEBP2 alpha B
E6-ab-5 775-788 cui:C0039194 denotes T lymphocytes
E7-ab-5 810-813 cui:C0439228 denotes day
E8-ab-5 817-824 cui:C0013935 denotes embryos
E9-ab-5 829-837 cui:C0021289 denotes newborns
E10-ab-5 850-856 cui:C1442465 denotes 4-week
E11-ab-5 857-860 cui:C0580836 denotes old
E12-ab-5 861-866 cui:C0001675 denotes adult
E13-ab-5 867-871 cui:C0026809 denotes mice
E14-ab-5 884-897 cui:C0020202 denotes hybridization
T6 772-774 LOCATION_OF denotes in
E1-ab-6 903-913 cui:C0185117 denotes expression
E2-ab-6 921-926 cui:C0017337 denotes genes
E3-ab-6 940-950 cui:C0205100 denotes peripheral
E4-ab-6 951-962 cui:C0024204 denotes lymph nodes
E5-ab-6 966-971 cui:C0001675 denotes adult
E6-ab-6 972-976 cui:C0026809 denotes mice
T7 937-939 LOCATION_OF denotes in
T8 963-965 PART_OF denotes of
E1-ab-7 982-993 cui:C1519595 denotes transcripts
E2-ab-7 1019-1027 cui:C0483191 denotes CD4- CD8
E3-ab-7 1030-1038 cui:C0483191 denotes CD4+ CD8
E4-ab-7 1041-1049 cui:C0483191 denotes CD4+ CD8
E5-ab-7 1056-1059 cui:C1332714 denotes CD4
E6-ab-7 1061-1070 cui:C0242629 denotes CD8+ cell
E7-ab-7 1071-1082 cui:C0032659 denotes populations
E1-ab-8 1088-1095 cui:C1274040 denotes results
E2-ab-8 1116-1121 cui:C0017337 denotes genes
E3-ab-8 1139-1146 cui:C0039194 denotes T cells
E4-ab-8 1164-1175 cui:C1527148 denotes development
E5-ab-8 1231-1244 cui:C0040649 denotes transcription
E6-ab-8 1215-1251 cui:C1566664 denotes T-cell-specific transcription factor
T9 1126-1135 PART_OF denotes expressed
E1-ab-9 1253-1264 cui:C1519595 denotes Transcripts
E2-ab-9 1268-1273 cui:C0025914 denotes mouse
E3-ab-9 1274-1278 cui:C0215508 denotes AML1
E4-ab-9 1279-1292 cui:C0215508 denotes PEBP2 alpha B
E5-ab-9 1315-1318 cui:C0439228 denotes day
E6-ab-9 1328-1341 cui:C0229601 denotes hematopoietic
E7-ab-9 1322-1347 cui:C1517162 denotes fetal hematopoietic liver
E8-ab-9 1359-1376 cui:C0005955 denotes bone marrow cells
E9-ab-9 1388-1392 cui:C0026809 denotes mice
T10 1312-1314 LOCATION_OF denotes in
T11 1312-1314 LOCATION_OF denotes in
T12 1377-1379 PART_OF denotes of
T13 1377-1379 PART_OF denotes of
E1-ab-10 1413-1418 cui:C0025914 denotes mouse
E2-ab-10 1419-1423 cui:C1335654 denotes AML1
E3-ab-10 1424-1437 cui:C0215508 denotes PEBP2 alpha B
E4-ab-10 1438-1448 cui:C0185117 denotes expression
E5-ab-10 1452-1465 cui:C0018957 denotes hematopoietic
E6-ab-10 1466-1471 cui:C0007634 denotes cells
E7-ab-10 1494-1506 cui:C0282637 denotes cell lineage
E8-ab-10 1535-1542 cui:C0439677 denotes myeloid
E9-ab-10 1543-1557 cui:C0598766 denotes leukemogenesis
T14 1438-1448 PART_OF denotes expression
R1 E6-ab-1 T1 subjectOf transcription factor,murine transcription factor
R2 E5-ab-1 T1 objectOf murine,murine transcription factor
R3 E6-ab-1 T2 subjectOf transcription factor,regulator
R4 E8-ab-1 T2 objectOf transcriptional,regulator
R5 E4-ab-3 T3 subjectOf AML1,human AML1
R6 E3-ab-3 T3 objectOf human,human AML1
R7 E4-ab-3 T4 subjectOf AML1,associated
R8 E6-ab-3 T4 objectOf acute myeloid leukemia,associated
R9 E4-ab-4 T5 subjectOf tissues,mouse tissues
R10 E3-ab-4 T5 objectOf mouse,mouse tissues
R11 E6-ab-5 T6 subjectOf T lymphocytes,in
R12 E5-ab-5 T6 objectOf PEBP2 alpha B,in
R13 E4-ab-6 T7 subjectOf lymph nodes,in
R14 E2-ab-6 T7 objectOf genes,in
R15 E4-ab-6 T8 subjectOf lymph nodes,of
R16 E6-ab-6 T8 objectOf mice,of
R17 E2-ab-8 T9 subjectOf genes,expressed
R18 E3-ab-8 T9 objectOf T cells,expressed
R19 E7-ab-9 T10 subjectOf fetal hematopoietic liver,in
R20 E4-ab-9 T10 objectOf PEBP2 alpha B,in
R21 E8-ab-9 T11 subjectOf bone marrow cells,in
R22 E4-ab-9 T11 objectOf PEBP2 alpha B,in
R23 E8-ab-9 T12 subjectOf bone marrow cells,of
R24 E9-ab-9 T12 objectOf mice,of
R25 E7-ab-9 T13 subjectOf fetal hematopoietic liver,of
R26 E9-ab-9 T13 objectOf mice,of
R27 E3-ab-10 T14 subjectOf PEBP2 alpha B,expression
R28 E6-ab-10 T14 objectOf cells,expression

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-94 Sentence denotes Expression of the Runt domain-encoding PEBP2 alpha genes in T cells during thymic development.
S2 95-276 Sentence denotes The PEBP2 alpha A and PEBP2 alpha B genes encode the DNA-binding subunit of a murine transcription factor, PEBP2, which is implicated as a T-cell-specific transcriptional regulator.
S3 277-368 Sentence denotes These two related genes share the evolutionarily conserved region encoding the Runt domain.
S4 369-546 Sentence denotes PEBP2 alpha B is the murine counterpart of human AML1, which is located at the breakpoints of the 8;21 and 3;21 chromosome translocations associated with acute myeloid leukemia.
S5 547-686 Sentence denotes Northern (RNA) blots of various adult mouse tissues revealed that the levels of expression of both genes were most prominent in the thymus.
S6 687-898 Sentence denotes Furthermore, transcripts of PEBP2 alpha A and mouse AML1/PEBP2 alpha B were detected in T lymphocytes in the thymuses from day 16 embryos and newborns, as well as 4-week-old adult mice, by in situ hybridization.
S7 899-977 Sentence denotes The expression of the genes persisted in peripheral lymph nodes of adult mice.
S8 978-1083 Sentence denotes The transcripts were detected in all the CD4- CD8-, CD4+ CD8+, CD4+ CD8-, and CD4- CD8+ cell populations.
S9 1084-1252 Sentence denotes The results indicated that both genes are expressed in T cells throughout their development, supporting the notion that PEBP2 is a T-cell-specific transcription factor.
S10 1253-1393 Sentence denotes Transcripts of mouse AML1/PEBP2 alpha B were also detected in day 12 fetal hematopoietic liver and in the bone marrow cells of newborn mice.
S11 1394-1558 Sentence denotes The implication of mouse AML1/PEBP2 alpha B expression in hematopoietic cells other than those of T-cell lineage is discussed in relation to myeloid leukemogenesis.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 14-30 NP denotes the Runt domain-
C2 39-56 NP denotes PEBP2 alpha genes
C3 60-67 NP denotes T cells
C4 95-136 NP denotes The PEBP2 alpha A and PEBP2 alpha B genes
C5 171-200 NP denotes a murine transcription factor
C6 202-207 NP denotes PEBP2
C7 209-214 NP denotes which
C8 277-300 NP denotes These two related genes
C9 352-367 NP denotes the Runt domain
C10 412-422 NP denotes human AML1
C11 424-429 NP denotes which
C13 641-651 NP denotes both genes
C12 627-651 NP denotes expression of both genes
C14 715-757 NP denotes PEBP2 alpha A and mouse AML1/PEBP2 alpha B
C15 775-788 NP denotes T lymphocytes
C16 829-837 NP denotes newborns
C17 850-871 NP denotes 4-week-old adult mice
C19 917-926 NP denotes the genes
C18 899-926 NP denotes The expression of the genes
C20 966-976 NP denotes adult mice
C21 1111-1121 NP denotes both genes
C22 1139-1146 NP denotes T cells
C23 1158-1163 NP denotes their
C24 1188-1198 NP denotes the notion
C25 1199-1203 NP denotes that
C26 1380-1392 NP denotes newborn mice
C27 1413-1448 NP denotes mouse AML1/PEBP2 alpha B expression
C28 1483-1488 NP denotes those
R1 C4 C2 coref-ident The PEBP2 alpha A and PEBP2 alpha B genes,PEBP2 alpha genes
R2 C6 C5 coref-appos PEBP2,a murine transcription factor
R3 C7 C6 coref-relat which,PEBP2
R4 C8 C2 coref-ident These two related genes,PEBP2 alpha genes
R5 C9 C1 coref-ident the Runt domain,the Runt domain-
R6 C11 C10 coref-relat which,human AML1
R7 C13 C8 coref-ident both genes,These two related genes
R8 C14 C4 coref-ident PEBP2 alpha A and mouse AML1/PEBP2 alpha B,The PEBP2 alpha A and PEBP2 alpha B genes
R9 C15 C3 coref-ident T lymphocytes,T cells
R10 C19 C14 coref-ident the genes,PEBP2 alpha A and mouse AML1/PEBP2 alpha B
R11 C18 C12 coref-ident The expression of the genes,expression of both genes
R12 C20 C17 coref-ident adult mice,4-week-old adult mice
R13 C21 C14 coref-ident both genes,PEBP2 alpha A and mouse AML1/PEBP2 alpha B
R14 C22 C15 coref-ident T cells,T lymphocytes
R15 C23 C21 coref-pron their,both genes
R16 C25 C24 coref-relat that,the notion
R17 C26 C16 coref-ident newborn mice,newborns
R18 C28 C27 coref-pron those,mouse AML1/PEBP2 alpha B expression

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 18-29 protein_domain_or_region denotes Runt domain
T2 60-67 cell_type denotes T cells
T3 75-93 other_name denotes thymic development
T4 148-167 protein_subunit denotes DNA-binding subunit
T5 173-200 protein_family_or_group denotes murine transcription factor
T6 202-207 protein_molecule denotes PEBP2
T7 234-275 protein_family_or_group denotes T-cell-specific transcriptional regulator
T8 356-367 protein_domain_or_region denotes Runt domain
T9 369-374 protein_molecule denotes PEBP2
T10 390-408 protein_family_or_group denotes murine counterpart
T11 412-422 protein_molecule denotes human AML1
T12 523-545 other_name denotes acute myeloid leukemia
T13 547-567 other_name denotes Northern (RNA) blots
T14 579-598 tissue denotes adult mouse tissues
T15 679-685 body_part denotes thymus
T16 715-720 protein_molecule denotes PEBP2
T17 733-744 protein_molecule denotes mouse AML1/
T18 744-749 protein_molecule denotes PEBP2
T19 775-788 cell_type denotes T lymphocytes
T20 796-804 body_part denotes thymuses
T21 817-824 multi_cell denotes embryos
T22 829-837 multi_cell denotes newborns
T23 861-871 multi_cell denotes adult mice
T24 876-897 other_name denotes in situ hybridization
T25 940-962 body_part denotes peripheral lymph nodes
T26 966-976 multi_cell denotes adult mice
T27 1139-1146 cell_type denotes T cells
T28 1204-1209 protein_molecule denotes PEBP2
T29 1215-1251 protein_family_or_group denotes T-cell-specific transcription factor
T30 1268-1279 protein_family_or_group denotes mouse AML1/
T31 1279-1284 protein_molecule denotes PEBP2
T32 1322-1347 body_part denotes fetal hematopoietic liver
T33 1359-1376 cell_type denotes bone marrow cells
T34 1380-1392 multi_cell denotes newborn mice
T35 1419-1424 protein_molecule denotes AML1/
T36 1424-1429 protein_molecule denotes PEBP2
T37 1452-1471 cell_type denotes hematopoietic cells
T38 1492-1506 cell_type denotes T-cell lineage
T39 1535-1557 other_name denotes myeloid leukemogenesis

metamap-sample

Id Subject Object Predicate Lexical cue
T1 1493-1499 C0039194 denotes -cell
T2 1140-1147 C0039194 denotes cells
T3 1216-1222 C0039194 denotes -cell-
T4 776-789 C0039194 denotes lymphocytes
T5 235-241 C0039194 denotes -cell-
T6 61-68 C0039194 denotes cells
T7 797-805 C0040113 denotes hymuses
T8 680-686 C0040113 denotes hymus.
T9 76-81 C0040113 denotes hymic
T10 357-361 C0013336 denotes unt
T11 19-23 C0013336 denotes unt
T12 1414-1419 C0026809 denotes ouse
T13 1389-1393 C0026809 denotes ice.
T14 1269-1273 C0026809 denotes ouse
T15 868-872 C0026809 denotes ice,
T16 734-739 C0026809 denotes ouse
T17 586-591 C0026809 denotes ouse
T18 391-396 C0026809 denotes urine
T19 174-180 C0026809 denotes urine
T20 1165-1176 C1527148 denotes evelopment,
T21 83-94 C1527148 denotes evelopment.
T22 344-352 C2700640 denotes ncoding
T23 138-144 C2700640 denotes ncode
T24 31-39 C2700640 denotes ncoding
T25 362-368 C1883221 denotes omain.
T26 24-30 C1883221 denotes omain-
T27 1439-1449 C0185117 denotes xpression
T28 1-11 C0185117 denotes xpression
T29 722-727 C2003941 denotes lpha
T30 106-111 C2003941 denotes lpha
T31 46-51 C2003941 denotes lpha
T32 46-57 C1537647 denotes lpha genes
T33 1280-1293 C0215508 denotes EBP2 alpha B
T34 745-758 C0215508 denotes EBP2 alpha B
T35 370-383 C0215508 denotes EBP2 alpha B
T36 118-131 C0215508 denotes EBP2 alpha B
T37 1117-1122 C0017337 denotes enes
T38 647-652 C0017337 denotes enes
T39 296-301 C0017337 denotes enes
T40 132-137 C0017337 denotes enes
T41 1232-1245 C0040649 denotes ranscription
T42 181-194 C0040649 denotes ranscription
T43 251-266 C0040649 denotes ranscriptional
T44 493-507 C0040715 denotes ranslocations
T45 482-507 C0040715 denotes hromosome translocations
T46 413-418 C0086418 denotes uman
T47 877-898 C0162788 denotes n situ hybridization.
T48 1495-1507 C0282637 denotes ell lineage
T49 479-492 C0008664 denotes 1 chromosome
T50 524-546 C0023467 denotes cute myeloid leukemia.
T51 830-838 C0021289 denotes ewborns,
T52 1254-1265 C1519595 denotes ranscripts
T53 983-994 C1519595 denotes ranscripts
T54 701-712 C1519595 denotes ranscripts
T55 1304-1312 C0442726 denotes etected
T56 1000-1008 C0442726 denotes etected
T57 764-772 C0442726 denotes etected
T58 967-972 C1706450 denotes dult
T59 862-867 C1706450 denotes dult
T60 580-585 C1706450 denotes dult
T61 1232-1252 C0040648 denotes ranscription factor.
T62 1365-1371 C0376152 denotes arrow
T63 558-561 C0035668 denotes NA)
T64 1316-1319 C0439228 denotes ay
T65 811-814 C0439228 denotes ay
T66 1223-1231 C0205369 denotes pecific
T67 242-249 C0205369 denotes pecific
T68 1218-1222 C1269647 denotes ell-
T69 1067-1071 C1269647 denotes ell
T70 1072-1083 C0032659 denotes opulations.
T71 1329-1342 C0018957 denotes ematopoietic
T72 477-478 C0439086 denotes ;
T73 1097-1106 C1444656 denotes ndicated
T74 548-555 C1709269 denotes orthern
T75 600-608 C0443289 denotes evealed
T76 302-307 C0237876 denotes hare
T77 1453-1472 C2323499 denotes ematopoietic cells
T78 1089-1096 C2825142 denotes esults
T79 1178-1188 C0183683 denotes upporting
T80 818-825 C0013935 denotes mbryos
T81 1500-1507 C1881379 denotes ineage
T82 337-343 C0205147 denotes egion
T83 508-523 C0332281 denotes ssociated with
T84 149-160 C1148673 denotes NA-binding
T85 663-672 C0205402 denotes rominent
T86 1544-1558 C0598766 denotes eukemogenesis.
T87 1536-1543 C0439677 denotes yeloid
T88 1524-1532 C0080103 denotes elation
T89 618-624 C0441889 denotes evels
T90 941-951 C0205100 denotes eripheral
T91 267-276 C1704735 denotes egulator.
T92 1349-1352 C1515981 denotes nd
T93 1381-1388 C2239178 denotes ewborn
T94 161-168 C1711351 denotes ubunit
T95 288-295 C0439849 denotes elated
T96 1214-1217 C0193959 denotes T-
T97 284-287 C0205448 denotes wo
T98 1057-1060 C3541261 denotes D4-
T99 1062-1065 C3538720 denotes D8+
T100 858-861 C0580836 denotes ld
T101 853-857 C0332174 denotes eek-
T102 658-662 C0205393 denotes ost
T103 592-599 C0040300 denotes issues
T104 572-579 C0440102 denotes arious