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PubMed:7757084 JSONTXT

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DisGeNET

Id Subject Object Predicate Lexical cue
T0 171-188 gene:367 denotes androgen receptor
T1 263-297 disease:C1839259 denotes spinal and bulbar muscular atrophy
T2 171-188 gene:367 denotes androgen receptor
T3 263-297 disease:C0752353 denotes spinal and bulbar muscular atrophy
T4 171-188 gene:367 denotes androgen receptor
T5 299-303 disease:C1839259 denotes SBMA
T6 171-188 gene:367 denotes androgen receptor
T7 299-303 disease:C0752353 denotes SBMA
R1 T0 T1 associated_with androgen receptor,spinal and bulbar muscular atrophy
R2 T2 T3 associated_with androgen receptor,spinal and bulbar muscular atrophy
R3 T4 T5 associated_with androgen receptor,SBMA
R4 T6 T7 associated_with androgen receptor,SBMA

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 31-36 cell_type denotes sperm
T2 93-98 cell_type denotes sperm
T3 146-163 DNA denotes CAG repeat region
T4 171-194 DNA denotes androgen receptor locus
T5 316-345 cell_type denotes X chromosome-containing sperm
T6 384-403 DNA denotes donor's somatic DNA
T7 844-862 DNA denotes SBMA X-chromosomes
T8 911-916 cell_type denotes sperm
T9 1008-1028 DNA denotes trinucleotide repeat

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
7757084-1#95#112#gene367 171-188 gene367 denotes androgen receptor
7757084-1#187#221#diseaseC1839259 263-297 diseaseC1839259 denotes spinal and bulbar muscular atrophy
7757084-1#223#227#diseaseC1839259 299-303 diseaseC1839259 denotes SBMA
95#112#gene367187#221#diseaseC1839259 7757084-1#95#112#gene367 7757084-1#187#221#diseaseC1839259 associated_with androgen receptor,spinal and bulbar muscular atrophy
95#112#gene367223#227#diseaseC1839259 7757084-1#95#112#gene367 7757084-1#223#227#diseaseC1839259 associated_with androgen receptor,SBMA

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-75 Sentence denotes CAG repeat length variation in sperm from a patient with Kennedy's disease.
S2 76-305 Sentence denotes Using a modified sperm typing protocol, the mutation frequency of the CAG repeat region at the androgen receptor locus has been measured using a rare semen sample from an individual with spinal and bulbar muscular atrophy (SBMA).
S3 306-464 Sentence denotes Among 258 X chromosome-containing sperm, 19% had a repeat number equal to the donor's somatic DNA (47 repeats), 66% were expansions and 15% were contractions.
S4 465-503 Sentence denotes The average expansion was 2.7 repeats.
S5 504-593 Sentence denotes More than half of the expansions involved one or two repeats; the largest was 11 repeats.
S6 594-693 Sentence denotes 68% of the contractions were also one or two repeats but six (16%) were very large (12-25 repeats).
S7 694-776 Sentence denotes One contraction generated an allele in an intermediate size range (33-39 repeats).
S8 777-887 Sentence denotes Such alleles have not been observed among more than 900 normal and SBMA X-chromosomes that have been examined.
S9 888-1096 Sentence denotes Comparison of the SBMA sperm typing results with mutation frequency data on normal alleles supports the hypothesis that trinucleotide repeat expansions may have a different molecular origin than contractions.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 42-74 NP denotes a patient with Kennedy's disease
C2 244-304 NP denotes an individual with spinal and bulbar muscular atrophy (SBMA)
C3 380-389 NP denotes the donor
C4 427-437 NP denotes expansions
C5 451-463 NP denotes contractions
C6 522-536 NP denotes the expansions
C7 601-617 NP denotes the contractions
C8 819-862 NP denotes more than 900 normal and SBMA X-chromosomes
C9 863-867 NP denotes that
C10 988-1002 NP denotes the hypothesis
C11 1003-1007 NP denotes that
R1 C2 C1 coref-ident an individual with spinal and bulbar muscular atrophy (SBMA),a patient with Kennedy's disease
R2 C3 C2 coref-ident the donor,an individual with spinal and bulbar muscular atrophy (SBMA)
R3 C6 C4 coref-ident the expansions,expansions
R4 C7 C5 coref-ident the contractions,contractions
R5 C9 C8 coref-relat that,more than 900 normal and SBMA X-chromosomes
R6 C11 C10 coref-relat that,the hypothesis

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 31-36 cell_type denotes sperm
T2 44-51 multi_cell denotes patient
T3 57-74 other_name denotes Kennedy's disease
T4 93-98 cell_type denotes sperm
T5 146-163 DNA_domain_or_region denotes CAG repeat region
T6 171-194 DNA_domain_or_region denotes androgen receptor locus
T7 263-297 other_name denotes spinal and bulbar muscular atrophy
T8 299-303 other_name denotes SBMA
T9 316-339 cell_type denotes X chromosome-containing
T10 340-345 cell_type denotes sperm
T11 384-403 DNA_family_or_group denotes donor's somatic DNA
T12 427-437 other_name denotes expansions
T13 451-463 other_name denotes contractions
T14 526-536 other_name denotes expansions
T15 605-617 other_name denotes contractions
T16 782-789 other_name denotes alleles
T17 844-848 other_name denotes SBMA
T18 906-910 other_name denotes SBMA
T19 911-916 cell_type denotes sperm
T20 937-960 other_name denotes mutation frequency data
T21 971-978 other_name denotes alleles
T22 1008-1028 DNA_domain_or_region denotes trinucleotide repeat
T23 1029-1039 other_name denotes expansions
T24 1083-1095 other_name denotes contractions