PubMed:7673194
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-142 | Sentence | denotes | Microtubules mediate cellular 25-hydroxyvitamin D3 trafficking and the genomic response to 1,25-dihydroxyvitamin D3 in normal human monocytes. |
| T2 | 143-264 | Sentence | denotes | The genomic actions of 1,25-dihydroxyvitamin D3 (1,25(OH)2D3) are mediated by the intracellular vitamin D receptor (VDR). |
| T3 | 265-489 | Sentence | denotes | Although immunocytochemistry has shown that disruption of microtubular assembly prevents nuclear access of the sterol-VDR complex, the role of microtubules in the response to 1,25(OH)2D3 has not been studied in viable cells. |
| T4 | 490-554 | Sentence | denotes | Our studies examined this interaction in normal human monocytes. |
| T5 | 555-660 | Sentence | denotes | Monocytes convert 25(OH)D3 to 1,25(OH)2D3 and to 24-hydroxylated metabolites more polar than 1,25(OH)2D3. |
| T6 | 661-902 | Sentence | denotes | Microtubule disruption totally abolished the ability of exogenous 1,25(OH)2D3 to suppress its own synthesis and to induce 24-hydroxylase mRNA and activity, without affecting either total 1,25(OH)2D3 uptake or maximal 1,25(OH)2D3-VDR binding. |
| T7 | 903-1002 | Sentence | denotes | Thus, intact microtubules are essential for 1,25(OH)2D3-dependent modulation of gene transcription. |
| T8 | 1003-1209 | Sentence | denotes | Interestingly, microtubule disruption also decreased monocyte 1,25(OH)2D3 synthesis, not by decreasing the Vmax of monocyte mitochondrial 1 alpha-hydroxylase but through an increase in the Km for 25(OH)2D3. |
| T9 | 1210-1241 | Sentence | denotes | We examined 25(OH)D3 transport. |
| T10 | 1242-1373 | Sentence | denotes | Microtubule disruption did not affect total cellular 25(OH)D3 uptake but reduced its intracellular trafficking to the mitochondria. |
| T11 | 1374-1502 | Sentence | denotes | Thus, microtubules participate in intracellular 25(OH)D3 transport, and their integrity determines normal 1,25(OH)2D3 synthesis. |
| T1 | 0-142 | Sentence | denotes | Microtubules mediate cellular 25-hydroxyvitamin D3 trafficking and the genomic response to 1,25-dihydroxyvitamin D3 in normal human monocytes. |
| T2 | 143-264 | Sentence | denotes | The genomic actions of 1,25-dihydroxyvitamin D3 (1,25(OH)2D3) are mediated by the intracellular vitamin D receptor (VDR). |
| T3 | 265-489 | Sentence | denotes | Although immunocytochemistry has shown that disruption of microtubular assembly prevents nuclear access of the sterol-VDR complex, the role of microtubules in the response to 1,25(OH)2D3 has not been studied in viable cells. |
| T4 | 490-554 | Sentence | denotes | Our studies examined this interaction in normal human monocytes. |
| T5 | 555-660 | Sentence | denotes | Monocytes convert 25(OH)D3 to 1,25(OH)2D3 and to 24-hydroxylated metabolites more polar than 1,25(OH)2D3. |
| T6 | 661-902 | Sentence | denotes | Microtubule disruption totally abolished the ability of exogenous 1,25(OH)2D3 to suppress its own synthesis and to induce 24-hydroxylase mRNA and activity, without affecting either total 1,25(OH)2D3 uptake or maximal 1,25(OH)2D3-VDR binding. |
| T7 | 903-1002 | Sentence | denotes | Thus, intact microtubules are essential for 1,25(OH)2D3-dependent modulation of gene transcription. |
| T8 | 1003-1209 | Sentence | denotes | Interestingly, microtubule disruption also decreased monocyte 1,25(OH)2D3 synthesis, not by decreasing the Vmax of monocyte mitochondrial 1 alpha-hydroxylase but through an increase in the Km for 25(OH)2D3. |
| T9 | 1210-1241 | Sentence | denotes | We examined 25(OH)D3 transport. |
| T10 | 1242-1373 | Sentence | denotes | Microtubule disruption did not affect total cellular 25(OH)D3 uptake but reduced its intracellular trafficking to the mitochondria. |
| T11 | 1374-1502 | Sentence | denotes | Thus, microtubules participate in intracellular 25(OH)D3 transport, and their integrity determines normal 1,25(OH)2D3 synthesis. |
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-12 | protein | denotes | Microtubules |
| T2 | 126-141 | cell_type | denotes | human monocytes |
| T3 | 239-257 | protein | denotes | vitamin D receptor |
| T4 | 259-262 | protein | denotes | VDR |
| T5 | 376-394 | protein | denotes | sterol-VDR complex |
| T6 | 408-420 | protein | denotes | microtubules |
| T7 | 476-488 | cell_type | denotes | viable cells |
| T8 | 538-553 | cell_type | denotes | human monocytes |
| T9 | 783-802 | RNA | denotes | 24-hydroxylase mRNA |
| T10 | 889-893 | protein | denotes | -VDR |
| T11 | 916-928 | protein | denotes | microtubules |
| T12 | 1018-1029 | protein | denotes | microtubule |
| T13 | 1056-1064 | cell_type | denotes | monocyte |
| T14 | 1118-1160 | protein | denotes | monocyte mitochondrial 1 alpha-hydroxylase |
| T15 | 1380-1392 | protein | denotes | microtubules |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 0-12 | NP | denotes | Microtubules |
| C2 | 21-62 | NP | denotes | cellular 25-hydroxyvitamin D3 trafficking |
| C3 | 91-115 | NP | denotes | 1,25-dihydroxyvitamin D3 |
| C4 | 119-141 | NP | denotes | normal human monocytes |
| C5 | 166-204 | NP | denotes | 1,25-dihydroxyvitamin D3 (1,25(OH)2D3) |
| C6 | 408-420 | NP | denotes | microtubules |
| C7 | 440-451 | NP | denotes | 1,25(OH)2D3 |
| C8 | 531-553 | NP | denotes | normal human monocytes |
| C9 | 555-564 | NP | denotes | Monocytes |
| C10 | 573-581 | NP | denotes | 25(OH)D3 |
| C11 | 585-596 | NP | denotes | 1,25(OH)2D3 |
| C12 | 648-659 | NP | denotes | 1,25(OH)2D3 |
| C13 | 661-683 | NP | denotes | Microtubule disruption |
| C14 | 717-738 | NP | denotes | exogenous 1,25(OH)2D3 |
| C15 | 751-754 | NP | denotes | its |
| C16 | 1018-1040 | NP | denotes | microtubule disruption |
| C17 | 1242-1264 | NP | denotes | Microtubule disruption |
| C19 | 1323-1326 | NP | denotes | its |
| C18 | 1323-1352 | NP | denotes | its intracellular trafficking |
| C20 | 1380-1392 | NP | denotes | microtubules |
| C21 | 1446-1451 | NP | denotes | their |
| R1 | C5 | C3 | coref-ident | "1,25-dihydroxyvitamin D3 (1,25(OH)2D3)","1,25-dihydroxyvitamin D3" |
| R2 | C6 | C1 | coref-ident | microtubules,Microtubules |
| R3 | C7 | C5 | coref-ident | "1,25(OH)2D3","1,25-dihydroxyvitamin D3 (1,25(OH)2D3)" |
| R4 | C8 | C4 | coref-ident | normal human monocytes,normal human monocytes |
| R5 | C9 | C8 | coref-ident | Monocytes,normal human monocytes |
| R6 | C11 | C7 | coref-ident | "1,25(OH)2D3","1,25(OH)2D3" |
| R7 | C12 | C11 | coref-ident | "1,25(OH)2D3","1,25(OH)2D3" |
| R8 | C15 | C14 | coref-pron | its,"exogenous 1,25(OH)2D3" |
| R9 | C16 | C13 | coref-ident | microtubule disruption,Microtubule disruption |
| R10 | C17 | C16 | coref-ident | Microtubule disruption,microtubule disruption |
| R11 | C19 | C10 | coref-pron | its,25(OH)D3 |
| R12 | C18 | C2 | coref-ident | its intracellular trafficking,cellular 25-hydroxyvitamin D3 trafficking |
| R13 | C20 | C6 | coref-ident | microtubules,microtubules |
| R14 | C21 | C20 | coref-pron | their,microtubules |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-142 | Sentence | denotes | Microtubules mediate cellular 25-hydroxyvitamin D3 trafficking and the genomic response to 1,25-dihydroxyvitamin D3 in normal human monocytes. |
| S2 | 143-264 | Sentence | denotes | The genomic actions of 1,25-dihydroxyvitamin D3 (1,25(OH)2D3) are mediated by the intracellular vitamin D receptor (VDR). |
| S3 | 265-489 | Sentence | denotes | Although immunocytochemistry has shown that disruption of microtubular assembly prevents nuclear access of the sterol-VDR complex, the role of microtubules in the response to 1,25(OH)2D3 has not been studied in viable cells. |
| S4 | 490-554 | Sentence | denotes | Our studies examined this interaction in normal human monocytes. |
| S5 | 555-660 | Sentence | denotes | Monocytes convert 25(OH)D3 to 1,25(OH)2D3 and to 24-hydroxylated metabolites more polar than 1,25(OH)2D3. |
| S6 | 661-902 | Sentence | denotes | Microtubule disruption totally abolished the ability of exogenous 1,25(OH)2D3 to suppress its own synthesis and to induce 24-hydroxylase mRNA and activity, without affecting either total 1,25(OH)2D3 uptake or maximal 1,25(OH)2D3-VDR binding. |
| S7 | 903-1002 | Sentence | denotes | Thus, intact microtubules are essential for 1,25(OH)2D3-dependent modulation of gene transcription. |
| S8 | 1003-1209 | Sentence | denotes | Interestingly, microtubule disruption also decreased monocyte 1,25(OH)2D3 synthesis, not by decreasing the Vmax of monocyte mitochondrial 1 alpha-hydroxylase but through an increase in the Km for 25(OH)2D3. |
| S9 | 1210-1241 | Sentence | denotes | We examined 25(OH)D3 transport. |
| S10 | 1242-1373 | Sentence | denotes | Microtubule disruption did not affect total cellular 25(OH)D3 uptake but reduced its intracellular trafficking to the mitochondria. |
| S11 | 1374-1502 | Sentence | denotes | Thus, microtubules participate in intracellular 25(OH)D3 transport, and their integrity determines normal 1,25(OH)2D3 synthesis. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-12 | protein_complex | denotes | Microtubules |
| T2 | 21-29 | other_name | denotes | cellular |
| T3 | 30-50 | lipid | denotes | 25-hydroxyvitamin D3 |
| T4 | 91-115 | lipid | denotes | 1,25-dihydroxyvitamin D3 |
| T5 | 126-141 | cell_type | denotes | human monocytes |
| T6 | 166-190 | lipid | denotes | 1,25-dihydroxyvitamin D3 |
| T7 | 239-257 | protein_family_or_group | denotes | vitamin D receptor |
| T8 | 259-262 | protein_family_or_group | denotes | VDR |
| T9 | 274-293 | other_name | denotes | immunocytochemistry |
| T10 | 323-344 | other_name | denotes | microtubular assembly |
| T11 | 376-383 | protein_complex | denotes | sterol- |
| T12 | 383-386 | protein_family_or_group | denotes | VDR |
| T13 | 408-420 | protein_complex | denotes | microtubules |
| T14 | 440-451 | lipid | denotes | 1,25(OH)2D3 |
| T15 | 476-488 | cell_type | denotes | viable cells |
| T16 | 538-553 | cell_type | denotes | human monocytes |
| T17 | 573-581 | lipid | denotes | 25(OH)D3 |
| T18 | 585-596 | lipid | denotes | 1,25(OH)2D3 |
| T19 | 648-659 | lipid | denotes | 1,25(OH)2D3 |
| T20 | 727-738 | lipid | denotes | 1,25(OH)2D3 |
| T21 | 783-802 | RNA_molecule | denotes | 24-hydroxylase mRNA |
| T22 | 842-847 | other_name | denotes | total |
| T23 | 848-859 | lipid | denotes | 1,25(OH)2D3 |
| T24 | 870-877 | other_name | denotes | maximal |
| T25 | 878-889 | lipid | denotes | 1,25(OH)2D3 |
| T26 | 889-893 | protein_family_or_group | denotes | -VDR |
| T27 | 916-928 | protein_complex | denotes | microtubules |
| T28 | 947-958 | lipid | denotes | 1,25(OH)2D3 |
| T29 | 983-1001 | other_name | denotes | gene transcription |
| T30 | 1018-1029 | protein_complex | denotes | microtubule |
| T31 | 1056-1064 | cell_type | denotes | monocyte |
| T32 | 1065-1076 | lipid | denotes | 1,25(OH)2D3 |
| T33 | 1110-1114 | other_name | denotes | Vmax |
| T34 | 1118-1126 | cell_type | denotes | monocyte |
| T35 | 1192-1194 | other_name | denotes | Km |
| T36 | 1199-1208 | lipid | denotes | 25(OH)2D3 |
| T37 | 1222-1230 | lipid | denotes | 25(OH)D3 |
| T38 | 1286-1294 | other_name | denotes | cellular |
| T39 | 1295-1303 | lipid | denotes | 25(OH)D3 |
| T40 | 1327-1352 | other_name | denotes | intracellular trafficking |
| T41 | 1360-1372 | cell_component | denotes | mitochondria |
| T42 | 1380-1392 | protein_complex | denotes | microtubules |
| T43 | 1422-1440 | other_name | denotes | 25(OH)D3 transport |
| T44 | 1480-1491 | lipid | denotes | 1,25(OH)2D3 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 126-131 | OrganismTaxon | denotes | human | 9606 |
| T2 | 538-543 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 0-12 | Body_part | denotes | Microtubules | http://purl.obolibrary.org/obo/GO_0005874 |
| T2 | 132-141 | Body_part | denotes | monocytes | http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054 |
| T4 | 225-238 | Body_part | denotes | intracellular | http://purl.obolibrary.org/obo/GO_0005622 |
| T5 | 408-420 | Body_part | denotes | microtubules | http://purl.obolibrary.org/obo/GO_0005874 |
| T6 | 544-553 | Body_part | denotes | monocytes | http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054 |
| T8 | 661-672 | Body_part | denotes | Microtubule | http://purl.obolibrary.org/obo/GO_0005874 |
| T9 | 916-928 | Body_part | denotes | microtubules | http://purl.obolibrary.org/obo/GO_0005874 |
| T10 | 1018-1029 | Body_part | denotes | microtubule | http://purl.obolibrary.org/obo/GO_0005874 |
| T11 | 1056-1064 | Body_part | denotes | monocyte | http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054 |
| T13 | 1118-1126 | Body_part | denotes | monocyte | http://purl.obolibrary.org/obo/CL_0000576|http://purl.obolibrary.org/obo/CL_0001054 |
| T15 | 1242-1253 | Body_part | denotes | Microtubule | http://purl.obolibrary.org/obo/GO_0005874 |
| T16 | 1327-1340 | Body_part | denotes | intracellular | http://purl.obolibrary.org/obo/GO_0005622 |
| T17 | 1380-1392 | Body_part | denotes | microtubules | http://purl.obolibrary.org/obo/GO_0005874 |
| T18 | 1408-1421 | Body_part | denotes | intracellular | http://purl.obolibrary.org/obo/GO_0005622 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 132-141 | Cell | denotes | monocytes | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T3 | 544-553 | Cell | denotes | monocytes | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T5 | 555-564 | Cell | denotes | Monocytes | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T7 | 1056-1064 | Cell | denotes | monocyte | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |
| T9 | 1118-1126 | Cell | denotes | monocyte | http://purl.obolibrary.org/obo/CL:0000576|http://purl.obolibrary.org/obo/CL:0001054 |