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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 14-34 protein denotes complement receptors
T2 35-38 protein denotes CR1
T3 40-44 protein denotes CD35
T4 50-53 protein denotes CR3
T5 55-65 protein denotes CD11b/CD18
T6 100-110 protein denotes NF-kappa B
T7 112-119 protein denotes p50/p65
T8 124-139 cell_type denotes human monocytes
T9 174-202 cell_type denotes HIV-infected monocytic cells
T10 204-224 cell_type denotes Monocyte/macrophages
T11 379-388 protein denotes cytokines
T12 397-406 protein denotes TNF-alpha
T13 439-448 protein denotes TNF-alpha
T14 517-540 protein denotes DNA-binding heterodimer
T15 541-551 protein denotes NF-kappa B
T16 553-560 protein denotes p50/p65
T17 605-629 DNA denotes HIV-long terminal repeat
T18 681-701 protein denotes complement receptors
T19 702-705 protein denotes CR1
T20 707-711 protein denotes CD35
T21 717-720 protein denotes CR3
T22 722-732 protein denotes CD11b/CD18
T23 764-798 cell_line denotes HIV-infected human monocytic cells
T24 800-820 cell_line denotes Monocytic cell lines
T25 936-953 protein denotes F(ab')2 fragments
T26 957-976 protein denotes monoclonal anti-CR1
T27 980-992 protein denotes anti-CR3 Abs
T28 1001-1013 protein denotes C3 fragments
T29 1030-1033 protein denotes CR1
T30 1037-1040 protein denotes CR3
T31 1123-1129 protein denotes p24 Ag
T32 1133-1146 cell_line denotes cell cultures
T33 1187-1203 cell_line denotes control cultures
T34 1264-1267 protein denotes CR1
T35 1271-1274 protein denotes CR3
T36 1312-1322 protein denotes NF-kappa B
T37 1323-1330 protein denotes p50/p65
T38 1334-1348 cell_type denotes infected cells
T39 1367-1377 protein denotes NF-kappa B
T40 1378-1385 protein denotes p50/p65
T41 1429-1432 protein denotes CR1
T42 1436-1439 protein denotes CR3
T43 1443-1480 cell_type denotes uninfected peripheral blood monocytes
T44 1607-1618 protein denotes rhTNF-alpha
T45 1620-1629 protein denotes TNF-alpha
T46 1667-1677 protein denotes NF-kappa B
T47 1678-1685 protein denotes p50/p65
T48 1711-1731 protein denotes complement receptors
T49 1821-1839 cell_type denotes infected monocytes
T50 1878-1908 protein denotes complement-opsonized particles
T51 1964-1975 protein denotes C3 receptor
T52 2014-2032 protein denotes NF-kappa B complex

semrep-sample

Id Subject Object Predicate Lexical cue
E1-ti-1 0-10 cui:C1444748 denotes Triggering
E2-ti-1 14-34 cui:C0034793 denotes complement receptors
E3-ti-1 35-38 cui:C0056182 denotes CR1
E4-ti-1 40-44 cui:C0056182 denotes CD35
E5-ti-1 50-53 cui:C0079785 denotes CR3
E6-ti-1 55-60 cui:C1366562 denotes CD11b
E7-ti-1 61-65 cui:C1334146 denotes CD18
E8-ti-1 75-96 cui:C1518440 denotes nuclear translocation
E9-ti-1 100-110 cui:C0079904 denotes NF-kappa B
E10-ti-1 112-115 cui:C1367009 denotes p50
E11-ti-1 116-119 cui:C0599933 denotes p65
E12-ti-1 124-129 cui:C0020114 denotes human
E13-ti-1 130-139 cui:C0026473 denotes monocytes
E14-ti-1 153-158 cui:C0521026 denotes viral
E15-ti-1 174-178 cui:C0001175 denotes HIV-
E16-ti-1 178-186 cui:C0439663 denotes infected
E17-ti-1 187-196 cui:C0026473 denotes monocytic
E18-ti-1 197-202 cui:C0007634 denotes cells
T1 14-38 ISA denotes complement receptors CR1
T2 67-74 AUGMENTS denotes induces
T3 67-74 AUGMENTS denotes induces
T4 124-139 PART_OF denotes human monocytes
T5 121-123 LOCATION_OF denotes in
T6 171-173 LOCATION_OF denotes in
E1-ab-1 204-224 cui:C1148382 denotes Monocyte/macrophages
E2-ab-1 236-239 cui:C0019682 denotes HIV
E3-ab-1 271-288 cui:C0425945 denotes prolonged periods
E4-ab-1 292-296 cui:C0040223 denotes time
E1-ab-2 298-303 cui:C0521026 denotes Viral
E2-ab-2 304-319 cui:C0017262 denotes gene expression
E3-ab-2 342-353 cui:C1292856 denotes stimulation
E4-ab-2 361-366 cui:C0007634 denotes cells
E5-ab-2 372-375 cui:C0023810 denotes LPS
E6-ab-2 379-388 cui:C0079189 denotes cytokines
E7-ab-2 397-406 cui:C1456820 denotes TNF-alpha
T7 379-406 ISA denotes cytokines such as TNF-alpha
T8 342-353 AUGMENTS denotes stimulation
T9 342-353 AUGMENTS denotes stimulation
T10 379-406 AUGMENTS denotes cytokines such as TNF-alpha
E1-ab-3 421-427 cui:C1280500 denotes effect
E2-ab-3 431-434 cui:C0023810 denotes LPS
E3-ab-3 439-448 cui:C1448177 denotes TNF-alpha
E4-ab-3 470-477 cui:C0085732 denotes ability
E5-ab-3 488-509 cui:C1518440 denotes nuclear translocation
E6-ab-3 517-521 cui:C0012854 denotes DNA-
E7-ab-3 541-551 cui:C0079904 denotes NF-kappa B
E8-ab-3 553-556 cui:C1367009 denotes p50
E9-ab-3 557-560 cui:C0599933 denotes p65
E10-ab-3 589-597 cui:C1519249 denotes sequence
E11-ab-3 605-629 cui:C0079517 denotes HIV-long terminal repeat
T11 421-427 INTERACTS_WITH denotes effect
T12 421-427 INTERACTS_WITH denotes effect
E1-ab-4 635-642 cui:C0150312 denotes present
E2-ab-4 643-648 cui:C0008972 denotes study
E3-ab-4 667-677 cui:C1444748 denotes triggering
E4-ab-4 681-701 cui:C0034793 denotes complement receptors
E5-ab-4 702-705 cui:C0056182 denotes CR1
E6-ab-4 707-711 cui:C0056182 denotes CD35
E7-ab-4 717-720 cui:C0079785 denotes CR3
E8-ab-4 722-727 cui:C1366562 denotes CD11b
E9-ab-4 728-732 cui:C1334146 denotes CD18
E10-ab-4 743-748 cui:C0521026 denotes viral
E11-ab-4 764-768 cui:C0001175 denotes HIV-
E12-ab-4 768-776 cui:C0439663 denotes infected
E13-ab-4 783-792 cui:C0026473 denotes monocytic
E14-ab-4 777-798 cui:C0427861 denotes human monocytic cells
T13 681-705 ISA denotes complement receptors CR1
E1-ab-5 800-809 cui:C0026473 denotes Monocytic
E2-ab-5 810-820 cui:C0007600 denotes cell lines
E3-ab-5 825-831 cui:C0205307 denotes normal
E4-ab-5 832-842 cui:C0205100 denotes peripheral
E5-ab-5 843-858 cui:C0026473 denotes blood monocytes
E6-ab-5 878-883 cui:C0019704 denotes HIV-1
E7-ab-5 936-940 cui:C0370187 denotes F(ab
E8-ab-5 944-953 cui:C0486805 denotes fragments
E9-ab-5 957-967 cui:C0746619 denotes monoclonal
E10-ab-5 973-976 cui:C0056182 denotes CR1
E11-ab-5 985-988 cui:C0079785 denotes CR3
E12-ab-5 989-992 cui:C0000833 denotes Abs
E13-ab-5 1004-1013 cui:C0486805 denotes fragments
E1-ab-6 1015-1026 cui:C1292856 denotes Stimulation
E2-ab-6 1030-1033 cui:C0056182 denotes CR1
E3-ab-6 1037-1040 cui:C0079785 denotes CR3
E4-ab-6 1051-1054 cui:C0205448 denotes two
E5-ab-6 1068-1076 cui:C0442805 denotes increase
E6-ab-6 1084-1090 cui:C1265611 denotes amount
E7-ab-6 1094-1098 cui:C0007634 denotes cell
E8-ab-6 1114-1122 cui:C0205346 denotes released
E9-ab-6 1123-1126 entrez:11076,140767 denotes p24
E10-ab-6 1133-1146 cui:C0007585 denotes cell cultures
E11-ab-6 1156-1166 cui:C0439185 denotes equivalent
E12-ab-6 1187-1194 cui:C0243148 denotes control
E13-ab-6 1195-1203 cui:C0010453 denotes cultures
E14-ab-6 1219-1222 cui:C0023810 denotes LPS
T14 1204-1213 INTERACTS_WITH denotes triggered
T15 1204-1213 INTERACTS_WITH denotes triggered
E1-ab-7 1227-1234 cui:C1517331 denotes further
E2-ab-7 1249-1260 cui:C1292856 denotes stimulation
E3-ab-7 1264-1267 cui:C0056182 denotes CR1
E4-ab-7 1271-1274 cui:C0079785 denotes CR3
E5-ab-7 1287-1308 cui:C1518440 denotes nuclear translocation
E6-ab-7 1323-1326 cui:C1367009 denotes p50
E7-ab-7 1312-1330 cui:C0214222 denotes NF-kappa B p50/p65
E8-ab-7 1334-1342 cui:C0439663 denotes infected
E9-ab-7 1343-1348 cui:C0007634 denotes cells
T16 1275-1282 AUGMENTS denotes induces
T17 1275-1282 AUGMENTS denotes induces
T18 1331-1333 LOCATION_OF denotes in
E1-ab-8 1378-1381 cui:C1367009 denotes p50
E2-ab-8 1367-1385 cui:C0214222 denotes NF-kappa B p50/p65
E3-ab-8 1414-1425 cui:C1292856 denotes stimulation
E4-ab-8 1429-1432 cui:C0056182 denotes CR1
E5-ab-8 1436-1439 cui:C0079785 denotes CR3
E6-ab-8 1454-1464 cui:C0205100 denotes peripheral
E7-ab-8 1465-1480 cui:C0026473 denotes blood monocytes
E8-ab-8 1486-1489 cui:C0001175 denotes HIV
E9-ab-8 1490-1502 cui:C0521144 denotes seronegative
E10-ab-8 1503-1509 cui:C0013018 denotes donors
T19 1414-1425 STIMULATES denotes stimulation
T20 1414-1425 STIMULATES denotes stimulation
T21 1440-1442 PART_OF denotes of
T22 1440-1442 PART_OF denotes of
E1-ab-9 1515-1521 cui:C1265611 denotes amount
E2-ab-9 1525-1532 cui:C0033684 denotes protein
E3-ab-9 1550-1557 cui:C0871364 denotes similar
E4-ab-9 1580-1585 cui:C0007634 denotes cells
E5-ab-9 1613-1618 cui:C0439095 denotes alpha
E1-ab-10 1620-1629 cui:C1456820 denotes TNF-alpha
E2-ab-10 1634-1637 cui:C1518422 denotes not
E3-ab-10 1678-1681 cui:C1367009 denotes p50
E4-ab-10 1667-1685 cui:C0214222 denotes NF-kappa B p50/p65
E5-ab-10 1697-1707 cui:C1444748 denotes triggering
E6-ab-10 1711-1731 cui:C0034793 denotes complement receptors
E1-ab-11 1781-1784 cui:C0019682 denotes HIV
E2-ab-11 1785-1800 cui:C0017262 denotes gene expression
E3-ab-11 1821-1829 cui:C0439663 denotes infected
E4-ab-11 1830-1839 cui:C0026473 denotes monocytes
E5-ab-11 1848-1859 cui:C0687133 denotes interaction
E6-ab-11 1867-1872 cui:C0007634 denotes cells
E7-ab-11 1878-1888 cui:C0009498 denotes complement
E8-ab-11 1899-1908 cui:C0597177 denotes particles
E9-ab-11 1927-1932 cui:C0521026 denotes viral
E10-ab-11 1967-1976 cui:C0597357 denotes receptor-
E11-ab-11 1976-1984 cui:C0086597 denotes mediated
E12-ab-11 1985-2006 cui:C1518440 denotes nuclear translocation
E13-ab-11 2014-2024 cui:C0079904 denotes NF-kappa B
E14-ab-11 2025-2032 cui:C0439855 denotes complex
T23 1818-1820 LOCATION_OF denotes in
R1 E3-ti-1 T1 subjectOf CR1,complement receptors CR1
R2 E2-ti-1 T1 objectOf complement receptors,complement receptors CR1
R3 E5-ti-1 T2 subjectOf CR3,induces
R4 E8-ti-1 T2 objectOf nuclear translocation,induces
R5 E4-ti-1 T3 subjectOf CD35,induces
R6 E8-ti-1 T3 objectOf nuclear translocation,induces
R7 E13-ti-1 T4 subjectOf monocytes,human monocytes
R8 E12-ti-1 T4 objectOf human,human monocytes
R9 E13-ti-1 T5 subjectOf monocytes,in
R10 E9-ti-1 T5 objectOf NF-kappa B,in
R11 E18-ti-1 T6 subjectOf cells,in
R12 E3-ti-1 T6 objectOf CR1,in
R13 E7-ab-2 T7 subjectOf TNF-alpha,cytokines such as TNF-alpha
R14 E6-ab-2 T7 objectOf cytokines,cytokines such as TNF-alpha
R15 E5-ab-2 T8 subjectOf LPS,stimulation
R16 E4-ab-2 T8 objectOf cells,stimulation
R17 E6-ab-2 T9 subjectOf cytokines,stimulation
R18 E4-ab-2 T9 objectOf cells,stimulation
R19 E7-ab-2 T10 subjectOf TNF-alpha,cytokines such as TNF-alpha
R20 E4-ab-2 T10 objectOf cells,cytokines such as TNF-alpha
R21 E9-ab-3 T11 subjectOf p65,effect
R22 E2-ab-3 T11 objectOf LPS,effect
R23 E9-ab-3 T12 subjectOf p65,effect
R24 E3-ab-3 T12 objectOf TNF-alpha,effect
R25 E5-ab-4 T13 subjectOf CR1,complement receptors CR1
R26 E4-ab-4 T13 objectOf complement receptors,complement receptors CR1
R27 E14-ab-6 T14 subjectOf LPS,triggered
R28 E3-ab-6 T14 objectOf CR3,triggered
R29 E14-ab-6 T15 subjectOf LPS,triggered
R30 E2-ab-6 T15 objectOf CR1,triggered
R31 E4-ab-7 T16 subjectOf CR3,induces
R32 E5-ab-7 T16 objectOf nuclear translocation,induces
R33 E3-ab-7 T17 subjectOf CR1,induces
R34 E5-ab-7 T17 objectOf nuclear translocation,induces
R35 E9-ab-7 T18 subjectOf cells,in
R36 E7-ab-7 T18 objectOf NF-kappa B p50/p65,in
R37 E2-ab-8 T19 subjectOf NF-kappa B p50/p65,stimulation
R38 E4-ab-8 T19 objectOf CR1,stimulation
R39 E2-ab-8 T20 subjectOf NF-kappa B p50/p65,stimulation
R40 E5-ab-8 T20 objectOf CR3,stimulation
R41 E5-ab-8 T21 subjectOf CR3,of
R42 E7-ab-8 T21 objectOf blood monocytes,of
R43 E4-ab-8 T22 subjectOf CR1,of
R44 E7-ab-8 T22 objectOf blood monocytes,of
R45 E4-ab-11 T23 subjectOf monocytes,in
R46 E1-ab-11 T23 objectOf HIV,in

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-203 Sentence denotes Triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18) induces nuclear translocation of NF-kappa B (p50/p65) in human monocytes and enhances viral replication in HIV-infected monocytic cells.
S2 204-297 Sentence denotes Monocyte/macrophages may harbor HIV in a nonproductive fashion for prolonged periods of time.
S3 298-416 Sentence denotes Viral gene expression may be reactivated by stimulation of the cells with LPS or cytokines such as TNF-alpha in vitro.
S4 417-630 Sentence denotes The effect of LPS and TNF-alpha is mediated by their ability to induce nuclear translocation of the DNA-binding heterodimer NF-kappa B (p50/p65), which binds to a specific sequence in the HIV-long terminal repeat.
S5 631-799 Sentence denotes The present study demonstrates that triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18) enhances viral replication in HIV-infected human monocytic cells.
S6 800-1014 Sentence denotes Monocytic cell lines and normal peripheral blood monocytes were infected with HIV-1 in vitro and cultured in the presence or absence of F(ab')2 fragments of monoclonal anti-CR1 or anti-CR3 Abs or with C3 fragments.
S7 1015-1223 Sentence denotes Stimulation of CR1 or CR3 induces a two- to fourfold increase in the amount of cell-associated and released p24 Ag in cell cultures that was equivalent to that observed in control cultures triggered with LPS.
S8 1224-1349 Sentence denotes We further observed that stimulation of CR1 or CR3 induces the nuclear translocation of NF-kappa B p50/p65 in infected cells.
S9 1350-1510 Sentence denotes Translocation of NF-kappa B p50/p65 was also observed following stimulation of CR1 or CR3 of uninfected peripheral blood monocytes from HIV-seronegative donors.
S10 1511-1619 Sentence denotes The amount of protein translocated was similar to that observed when cells were stimulated with rhTNF-alpha.
S11 1620-1732 Sentence denotes TNF-alpha did not mediate the translocation of NF-kappa B p50/p65 induced by triggering of complement receptors.
S12 1733-2033 Sentence denotes Taken together, these observations suggest that HIV gene expression may be activated in infected monocytes through interaction of the cells with complement-opsonized particles and that enhanced viral replication is associated with C3 receptor-mediated nuclear translocation of the NF-kappa B complex.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-66 NP denotes Triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18)
C3 100-120 NP denotes NF-kappa B (p50/p65)
C2 75-120 NP denotes nuclear translocation of NF-kappa B (p50/p65)
C5 174-202 NP denotes HIV-infected monocytic cells
C4 153-202 NP denotes viral replication in HIV-infected monocytic cells
C6 204-224 NP denotes Monocyte/macrophages
C7 357-366 NP denotes the cells
C8 372-375 NP denotes LPS
C9 397-406 NP denotes TNF-alpha
C10 431-448 NP denotes LPS and TNF-alpha
C11 464-469 NP denotes their
C13 513-561 NP denotes the DNA-binding heterodimer NF-kappa B (p50/p65)
C12 488-561 NP denotes nuclear translocation of the DNA-binding heterodimer NF-kappa B (p50/p65)
C14 563-568 NP denotes which
C15 667-733 NP denotes triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18)
C17 764-798 NP denotes HIV-infected human monocytic cells
C16 743-798 NP denotes viral replication in HIV-infected human monocytic cells
C18 1015-1040 NP denotes Stimulation of CR1 or CR3
C19 1049-1146 NP denotes a two- to fourfold increase in the amount of cell-associated and released p24 Ag in cell cultures
C20 1147-1151 NP denotes that
C21 1170-1174 NP denotes that
C22 1219-1222 NP denotes LPS
C23 1249-1274 NP denotes stimulation of CR1 or CR3
C25 1312-1330 NP denotes NF-kappa B p50/p65
C24 1283-1330 NP denotes the nuclear translocation of NF-kappa B p50/p65
C26 1334-1348 NP denotes infected cells
C28 1367-1385 NP denotes NF-kappa B p50/p65
C27 1350-1385 NP denotes Translocation of NF-kappa B p50/p65
C29 1511-1545 NP denotes The amount of protein translocated
C30 1561-1565 NP denotes that
C31 1620-1629 NP denotes TNF-alpha
C33 1667-1685 NP denotes NF-kappa B p50/p65
C32 1646-1685 NP denotes the translocation of NF-kappa B p50/p65
C34 1697-1731 NP denotes triggering of complement receptors
C35 1821-1839 NP denotes infected monocytes
C36 1863-1872 NP denotes the cells
R1 C7 C6 coref-ident the cells,Monocyte/macrophages
R2 C11 C10 coref-pron their,LPS and TNF-alpha
R3 C13 C3 coref-ident the DNA-binding heterodimer NF-kappa B (p50/p65),NF-kappa B (p50/p65)
R4 C12 C2 coref-ident nuclear translocation of the DNA-binding heterodimer NF-kappa B (p50/p65),nuclear translocation of NF-kappa B (p50/p65)
R5 C14 C13 coref-relat which,the DNA-binding heterodimer NF-kappa B (p50/p65)
R6 C15 C1 coref-ident triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18),Triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18)
R7 C17 C5 coref-ident HIV-infected human monocytic cells,HIV-infected monocytic cells
R8 C16 C4 coref-ident viral replication in HIV-infected human monocytic cells,viral replication in HIV-infected monocytic cells
R9 C20 C19 coref-relat that,a two- to fourfold increase in the amount of cell-associated and released p24 Ag in cell cultures
R10 C21 C19 coref-pron that,a two- to fourfold increase in the amount of cell-associated and released p24 Ag in cell cultures
R11 C22 C8 coref-ident LPS,LPS
R12 C23 C18 coref-ident stimulation of CR1 or CR3,Stimulation of CR1 or CR3
R13 C25 C13 coref-ident NF-kappa B p50/p65,the DNA-binding heterodimer NF-kappa B (p50/p65)
R14 C24 C12 coref-ident the nuclear translocation of NF-kappa B p50/p65,nuclear translocation of the DNA-binding heterodimer NF-kappa B (p50/p65)
R15 C26 C17 coref-ident infected cells,HIV-infected human monocytic cells
R16 C28 C25 coref-ident NF-kappa B p50/p65,NF-kappa B p50/p65
R17 C27 C24 coref-ident Translocation of NF-kappa B p50/p65,the nuclear translocation of NF-kappa B p50/p65
R18 C30 C29 coref-pron that,The amount of protein translocated
R19 C31 C9 coref-ident TNF-alpha,TNF-alpha
R20 C33 C28 coref-ident NF-kappa B p50/p65,NF-kappa B p50/p65
R21 C32 C27 coref-ident the translocation of NF-kappa B p50/p65,Translocation of NF-kappa B p50/p65
R22 C34 C15 coref-ident triggering of complement receptors,triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18)
R23 C35 C26 coref-ident infected monocytes,infected cells
R24 C36 C35 coref-ident the cells,infected monocytes

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 14-34 protein_family_or_group denotes complement receptors
T2 35-38 protein_molecule denotes CR1
T3 40-44 protein_molecule denotes CD35
T4 50-53 protein_molecule denotes CR3
T5 55-65 protein_molecule denotes CD11b/CD18
T6 75-96 other_name denotes nuclear translocation
T7 100-110 protein_molecule denotes NF-kappa B
T8 112-119 protein_molecule denotes p50/p65
T9 124-139 cell_type denotes human monocytes
T10 153-170 other_name denotes viral replication
T11 174-202 cell_type denotes HIV-infected monocytic cells
T12 204-224 cell_type denotes Monocyte/macrophages
T13 236-239 virus denotes HIV
T14 298-319 other_name denotes Viral gene expression
T15 372-375 lipid denotes LPS
T16 379-388 protein_family_or_group denotes cytokines
T17 397-406 protein_molecule denotes TNF-alpha
T18 431-434 lipid denotes LPS
T19 439-448 protein_molecule denotes TNF-alpha
T20 488-509 other_name denotes nuclear translocation
T21 517-540 protein_family_or_group denotes DNA-binding heterodimer
T22 541-551 protein_molecule denotes NF-kappa B
T23 553-560 protein_molecule denotes p50/p65
T24 605-629 DNA_domain_or_region denotes HIV-long terminal repeat
T25 681-701 protein_family_or_group denotes complement receptors
T26 702-705 protein_molecule denotes CR1
T27 707-711 protein_molecule denotes CD35
T28 717-720 protein_molecule denotes CR3
T29 722-732 protein_molecule denotes CD11b/CD18
T30 743-760 other_name denotes viral replication
T31 764-798 cell_line denotes HIV-infected human monocytic cells
T32 800-820 cell_line denotes Monocytic cell lines
T33 878-883 virus denotes HIV-1
T34 936-953 protein_subunit denotes F(ab')2 fragments
T35 957-973 protein_molecule denotes monoclonal anti-
T36 973-976 protein_molecule denotes CR1
T37 980-985 protein_family_or_group denotes anti-
T38 985-988 protein_molecule denotes CR3
T39 1001-1013 protein_subunit denotes C3 fragments
T40 1030-1033 protein_molecule denotes CR1
T41 1037-1040 protein_molecule denotes CR3
T42 1123-1129 protein_molecule denotes p24 Ag
T43 1133-1146 cell_line denotes cell cultures
T44 1187-1203 cell_line denotes control cultures
T45 1219-1222 lipid denotes LPS
T46 1264-1267 protein_molecule denotes CR1
T47 1271-1274 protein_molecule denotes CR3
T48 1287-1308 other_name denotes nuclear translocation
T49 1312-1322 protein_molecule denotes NF-kappa B
T50 1323-1330 protein_molecule denotes p50/p65
T51 1334-1348 cell_type denotes infected cells
T52 1367-1377 protein_molecule denotes NF-kappa B
T53 1378-1385 protein_molecule denotes p50/p65
T54 1429-1432 protein_molecule denotes CR1
T55 1436-1439 protein_molecule denotes CR3
T56 1443-1480 cell_type denotes uninfected peripheral blood monocytes
T57 1486-1509 multi_cell denotes HIV-seronegative donors
T58 1607-1618 protein_molecule denotes rhTNF-alpha
T59 1620-1629 protein_molecule denotes TNF-alpha
T60 1667-1677 protein_molecule denotes NF-kappa B
T61 1678-1685 protein_molecule denotes p50/p65
T62 1711-1731 protein_family_or_group denotes complement receptors
T63 1781-1800 other_name denotes HIV gene expression
T64 1821-1839 cell_type denotes infected monocytes
T65 1878-1908 protein_family_or_group denotes complement-opsonized particles
T66 1927-1944 other_name denotes viral replication
T67 1964-1975 protein_family_or_group denotes C3 receptor
T68 1985-2006 other_name denotes nuclear translocation
T69 2014-2032 protein_complex denotes NF-kappa B complex

metamap-sample

Id Subject Object Predicate Lexical cue
T69 398-407 C1456820 denotes NF-alpha
T70 1994-2006 C0040715 denotes ranslocation
T71 1651-1664 C0040715 denotes ranslocation
T72 1351-1364 C0040715 denotes ranslocation
T73 1668-1682 C0132348 denotes F-kappa B p50/
T74 1313-1327 C0132348 denotes F-kappa B p50/
T75 879-884 C0019704 denotes IV-1
T76 606-630 C0079517 denotes IV-long terminal repeat.
T77 299-309 C0017376 denotes iral gene
T78 1786-1801 C0017262 denotes ene expression
T79 305-320 C0017262 denotes ene expression
T80 1712-1732 C0034793 denotes omplement receptors.
T81 1124-1127 C0054970 denotes 24
T82 1756-1767 C0700325 denotes bservations
T83 885-893 C0021135 denotes n vitro
T84 408-416 C0021135 denotes n vitro.
T85 1567-1575 C1441672 denotes bserved
T86 1396-1404 C1441672 denotes bserved
T87 1236-1244 C1441672 denotes bserved
T88 1176-1184 C1441672 denotes bserved
T89 1415-1426 C1292856 denotes timulation
T90 1250-1261 C1292856 denotes timulation
T91 1016-1027 C1292856 denotes timulation
T92 343-354 C1292856 denotes timulation
T93 214-225 C0024432 denotes acrophages
T94 1196-1204 C0010453 denotes ultures
T95 471-478 C0085732 denotes bility
T96 380-389 C0079189 denotes ytokines
T97 1220-1223 C2697656 denotes PS.
T98 432-435 C2697656 denotes PS
T99 373-376 C2697656 denotes PS
T100 811-821 C0007600 denotes ell lines
T101 293-297 C0040223 denotes ime.
T102 1516-1522 C1265611 denotes mount
T103 1085-1091 C1265611 denotes mount
T104 1139-1147 C0430400 denotes ultures
T105 898-906 C0430400 denotes ultured
T106 1131-1133 C0150312 denotes n
T107 636-643 C0150312 denotes resent
T108 1455-1481 C1321301 denotes eripheral blood monocytes
T109 833-859 C1321301 denotes eripheral blood monocytes
T110 1977-1985 C0127400 denotes ediated
T111 453-461 C0127400 denotes ediated
T112 1526-1532 C0033684 denotes rotein
T113 1095-1110 C0699040 denotes ell-associated
T114 1405-1414 C0332282 denotes ollowing
T115 1228-1235 C1517331 denotes urther
T116 230-236 C0475311 denotes arbor
T117 1849-1860 C1704675 denotes nteraction
T118 1639-1646 C0086597 denotes ediate
T119 1635-1638 C1518422 denotes ot
T120 1734-1739 C1883727 denotes aken
T121 1740-1748 C1883357 denotes ogether,
T122 1052-1055 C0205448 denotes wo-
T123 1769-1776 C1705535 denotes uggest
T124 1134-1137 C1269647 denotes ell
T125 1069-1077 C0442805 denotes ncrease
T126 644-649 C2603343 denotes tudy
T127 1504-1510 C1527169 denotes onors.
T128 310-320 C0185117 denotes xpression
T129 1900-1909 C0597177 denotes articles
T130 2026-2033 C1704241 denotes omplex.
T131 1157-1167 C0439185 denotes quivalent
T132 1551-1558 C2348205 denotes imilar
T133 1949-1964 C0332281 denotes ssociated with
T134 1809-1818 C1879547 denotes ctivated
T135 1614-1619 C2003941 denotes lpha.
T136 422-428 C1280500 denotes ffect
T137 914-922 C0392148 denotes resence
T138 1188-1195 C1882979 denotes ontrol
T139 1592-1602 C1948023 denotes timulated
T1 125-130 C0086418 denotes uman
T2 1437-1440 C0079785 denotes R3
T3 1272-1275 C0079785 denotes R3
T4 1038-1041 C0079785 denotes R3
T5 986-989 C0079785 denotes R3
T6 723-733 C0079785 denotes D11b/CD18)
T7 718-721 C0079785 denotes R3
T8 56-66 C0079785 denotes D11b/CD18)
T9 51-54 C0079785 denotes R3
T10 1430-1433 C0056182 denotes R1
T11 1265-1268 C0056182 denotes R1
T12 1031-1034 C0056182 denotes R1
T13 974-977 C0056182 denotes R1
T14 693-706 C0056182 denotes eceptors CR1
T15 26-39 C0056182 denotes eceptors CR1
T16 1831-1840 C0026473 denotes onocytes
T17 801-810 C0026473 denotes onocytic
T18 784-793 C0026473 denotes onocytic
T19 205-213 C0026473 denotes onocyte/
T20 131-140 C0026473 denotes onocytes
T21 188-197 C0026473 denotes onocytic
T22 1782-1785 C0019699 denotes IV
T23 1487-1490 C0019699 denotes IV-
T24 765-768 C0019699 denotes IV-
T25 237-240 C0019699 denotes IV
T26 175-178 C0019699 denotes IV-
T27 1879-1889 C0009498 denotes omplement-
T28 682-692 C0009498 denotes omplement
T29 15-25 C0009498 denotes omplement
T30 1928-1945 C0042774 denotes iral replication
T31 154-171 C0042774 denotes iral replication
T32 2015-2025 C0079904 denotes F-kappa B
T33 542-552 C0079904 denotes F-kappa B
T34 101-111 C0079904 denotes F-kappa B
T35 1687-1694 C0205263 denotes nduced
T36 1276-1283 C0205263 denotes nduces
T37 1042-1049 C0205263 denotes nduces
T38 482-488 C0205263 denotes nduce
T39 68-74 C0205263 denotes nduces
T40 1919-1926 C2349975 denotes nhanced
T41 735-743 C2349975 denotes nhances
T42 145-152 C2349975 denotes nhances
T43 1868-1873 C0007634 denotes ells
T44 1581-1586 C0007634 denotes ells
T45 1344-1349 C0007634 denotes ells.
T46 362-367 C0007634 denotes ells
T47 198-203 C0007634 denotes ells.
T48 1986-2006 C1518440 denotes uclear translocation
T49 489-510 C1518440 denotes uclear translocation
T50 76-97 C1518440 denotes uclear translocation
T51 1698-1708 C1444748 denotes riggering
T52 1205-1214 C1444748 denotes riggered
T53 668-677 C1444748 denotes riggering
T54 1-11 C1444748 denotes riggering
T55 1683-1685 C3540646 denotes 65
T56 1383-1386 C3540646 denotes 65
T57 1328-1331 C3540646 denotes 65
T58 558-561 C3540646 denotes 65)
T59 117-120 C3540646 denotes 65)
T60 1822-1830 C0439663 denotes nfected
T61 1335-1343 C0439663 denotes nfected
T62 865-873 C0439663 denotes nfected
T63 769-777 C0439663 denotes nfected
T64 179-187 C0439663 denotes nfected
T65 299-304 C0521026 denotes iral
T66 154-159 C0521026 denotes iral
T67 1621-1630 C1456820 denotes NF-alpha
T68 440-449 C1456820 denotes NF-alpha
T140 570-575 C1167622 denotes inds
T141 590-598 C1519249 denotes equence
T142 581-589 C0205369 denotes pecific
T143 328-339 C0521123 denotes eactivated
T144 1968-1976 C0597357 denotes eceptor-
T145 926-933 C1689985 denotes bsence
T146 1115-1123 C0391871 denotes eleased
T147 1491-1503 C0521144 denotes eronegative
T148 826-832 C0439166 denotes ormal
T149 518-529 C1148673 denotes NA-binding
T150 958-968 C0746619 denotes onoclonal