PubMed:7523507
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 97-131 | protein | denotes | phosphotyrosine-containing protein |
| T2 | 137-157 | DNA | denotes | proto-oncogene c-fos |
| T3 | 164-184 | DNA | denotes | immediate-early gene |
| T4 | 431-453 | DNA | denotes | serum response element |
| T5 | 455-458 | DNA | denotes | SRE |
| T6 | 467-490 | DNA | denotes | c-fos regulatory region |
| T7 | 545-559 | protein | denotes | growth factors |
| T8 | 652-667 | protein | denotes | protein complex |
| T9 | 669-675 | protein | denotes | Band A |
| T10 | 686-693 | DNA | denotes | SRE DNA |
| T11 | 739-750 | cell_line | denotes | human PBL-T |
| T12 | 789-795 | protein | denotes | Band A |
| T13 | 809-830 | protein | denotes | serum response factor |
| T14 | 916-929 | cell_line | denotes | resting PBL-T |
| T15 | 967-973 | protein | denotes | Band A |
| T16 | 981-990 | DNA | denotes | SRE motif |
| T17 | 1073-1079 | protein | denotes | Band A |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 21-53 | NP | denotes | the c-fos serum response element |
| C2 | 95-131 | NP | denotes | a phosphotyrosine-containing protein |
| C3 | 133-157 | NP | denotes | The proto-oncogene c-fos |
| C4 | 190-212 | NP | denotes | one of the first genes |
| C5 | 427-490 | NP | denotes | The serum response element (SRE) in the c-fos regulatory region |
| C6 | 639-676 | NP | denotes | an inducible protein complex (Band A) |
| C7 | 789-795 | NP | denotes | Band A |
| C9 | 858-867 | NP | denotes | A protein |
| C10 | 868-872 | NP | denotes | that |
| C8 | 858-912 | NP | denotes | A protein that is phosphorylated on a tyrosine residue |
| C11 | 967-973 | NP | denotes | Band A |
| C12 | 1023-1035 | NP | denotes | this protein |
| C13 | 1073-1079 | NP | denotes | Band A |
| R1 | C4 | C3 | coref-ident | one of the first genes,The proto-oncogene c-fos |
| R2 | C5 | C1 | coref-ident | The serum response element (SRE) in the c-fos regulatory region,the c-fos serum response element |
| R3 | C7 | C6 | coref-ident | Band A,an inducible protein complex (Band A) |
| R4 | C10 | C9 | coref-relat | that,A protein |
| R5 | C8 | C2 | coref-ident | A protein that is phosphorylated on a tyrosine residue,a phosphotyrosine-containing protein |
| R6 | C11 | C7 | coref-ident | Band A,Band A |
| R7 | C12 | C9 | coref-ident | this protein,A protein |
| R8 | C13 | C11 | coref-ident | Band A,Band A |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-132 | Sentence | denotes | Inducible binding to the c-fos serum response element during T cell activation is regulated by a phosphotyrosine-containing protein. |
| S2 | 133-283 | Sentence | denotes | The proto-oncogene c-fos is an immediate-early gene, and one of the first genes transcribed after stimulation of most cells with a variety of ligands. |
| S3 | 284-426 | Sentence | denotes | Fos expression may be a pivotal event in converting ligand-receptor interactions at the membrane into functional modulation of cell phenotype. |
| S4 | 427-625 | Sentence | denotes | The serum response element (SRE) in the c-fos regulatory region participates in induction of transcription by various growth factors and by phorbol esters and subsequent squelching of transcription. |
| S5 | 626-788 | Sentence | denotes | We show that an inducible protein complex (Band A) binds to SRE DNA within 10 min after mitogenic stimulation of human PBL-T, and becomes nondetectable by 60 min. |
| S6 | 789-857 | Sentence | denotes | Band A contains the serum response factor plus additional factor(s). |
| S7 | 858-991 | Sentence | denotes | A protein that is phosphorylated on a tyrosine residue in resting PBL-T suppresses binding of a component of Band A to the SRE motif. |
| S8 | 992-1134 | Sentence | denotes | Upon stimulation of the cells, this protein no longer prevents binding of DNA by Band A, and suppression of binding is restored within 30 min. |
| S9 | 1135-1227 | Sentence | denotes | The phosphorylated tyrosine residue itself is important for the protein-protein interaction. |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 61-78 | other_name | denotes | T cell activation |
| T2 | 97-131 | protein_family_or_group | denotes | phosphotyrosine-containing protein |
| T3 | 137-157 | DNA_domain_or_region | denotes | proto-oncogene c-fos |
| T4 | 164-184 | DNA_family_or_group | denotes | immediate-early gene |
| T5 | 336-364 | other_name | denotes | ligand-receptor interactions |
| T6 | 372-380 | cell_component | denotes | membrane |
| T7 | 411-425 | other_name | denotes | cell phenotype |
| T8 | 431-453 | DNA_domain_or_region | denotes | serum response element |
| T9 | 455-458 | DNA_domain_or_region | denotes | SRE |
| T10 | 467-490 | DNA_domain_or_region | denotes | c-fos regulatory region |
| T11 | 545-559 | protein_family_or_group | denotes | growth factors |
| T12 | 567-581 | other_organic_compound | denotes | phorbol esters |
| T13 | 652-667 | protein_complex | denotes | protein complex |
| T14 | 669-675 | protein_molecule | denotes | Band A |
| T15 | 686-689 | DNA_domain_or_region | denotes | SRE |
| T16 | 714-735 | other_name | denotes | mitogenic stimulation |
| T17 | 739-750 | cell_line | denotes | human PBL-T |
| T18 | 789-795 | protein_molecule | denotes | Band A |
| T19 | 809-830 | protein_family_or_group | denotes | serum response factor |
| T20 | 896-912 | amino_acid_monomer | denotes | tyrosine residue |
| T21 | 916-929 | cell_line | denotes | resting PBL-T |
| T22 | 967-973 | protein_molecule | denotes | Band A |
| T23 | 981-984 | DNA_domain_or_region | denotes | SRE |
| T24 | 1073-1079 | protein_molecule | denotes | Band A |
| T25 | 1139-1170 | amino_acid_monomer | denotes | phosphorylated tyrosine residue |
| T26 | 1199-1226 | other_name | denotes | protein-protein interaction |