PubMed:7522548
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 21-29 | cell_type | denotes | monocyte |
| T2 | 54-76 | protein | denotes | nuclear factor-kappa B |
| T3 | 107-140 | protein | denotes | vascular cell adhesion molecule-1 |
| T4 | 144-161 | cell_type | denotes | endothelial cells |
| T5 | 212-229 | cell_type | denotes | endothelial cells |
| T6 | 230-271 | protein | denotes | stimulated by tumor necrosis factor-alpha |
| T7 | 273-276 | protein | denotes | TNF |
| T8 | 301-318 | protein | denotes | surface receptors |
| T9 | 328-361 | protein | denotes | vascular cell adhesion molecule-1 |
| T10 | 363-369 | protein | denotes | VCAM-1 |
| T11 | 459-481 | protein | denotes | nuclear factor-kappa B |
| T12 | 483-493 | protein | denotes | NF-kappa B |
| T13 | 502-516 | DNA | denotes | kappa B motifs |
| T14 | 532-595 | DNA | denotes | VCAM-1 and intercellular adhesion molecule-1 (ICAM-1) promoters |
| T15 | 648-654 | protein | denotes | VCAM-1 |
| T16 | 659-665 | protein | denotes | ICAM-1 |
| T17 | 691-699 | cell_type | denotes | monocyte |
| T18 | 712-762 | cell_line | denotes | TNF-treated human umbilical vein endothelial cells |
| T19 | 764-770 | cell_line | denotes | HUVECs |
| T20 | 823-841 | protein | denotes | TNF-induced VCAM-1 |
| T21 | 850-872 | protein | denotes | ICAM-1 surface protein |
| T22 | 882-924 | cell_type | denotes | human umbilical arterial endothelial cells |
| T23 | 978-984 | cell_line | denotes | HUVECs |
| T24 | 1068-1074 | cell_line | denotes | HUVECs |
| T25 | 1108-1118 | protein | denotes | NF-kappa B |
| T26 | 1135-1138 | protein | denotes | TNF |
| T27 | 1161-1167 | protein | denotes | VCAM-1 |
| T28 | 1196-1206 | protein | denotes | NF-kappa B |
| T29 | 1214-1220 | cell_line | denotes | HUVECs |
| T30 | 1285-1291 | protein | denotes | VCAM-1 |
| T31 | 1339-1345 | protein | denotes | ICAM-1 |
| T32 | 1386-1399 | protein | denotes | NADPH oxidase |
| T33 | 1414-1430 | protein | denotes | cytochrome P-450 |
| T34 | 1452-1458 | protein | denotes | VCAM-1 |
| T35 | 1608-1628 | cell_line | denotes | monocytic U937 cells |
| T36 | 1632-1650 | cell_line | denotes | TNF-treated HUVECs |
| T37 | 1695-1726 | protein | denotes | anti-VCAM-1 monoclonal antibody |
| T38 | 1727-1731 | protein | denotes | 1G11 |
| T39 | 1747-1751 | cell_line | denotes | U937 |
| T40 | 1765-1771 | protein | denotes | VCAM-1 |
| T41 | 1833-1839 | protein | denotes | VCAM-1 |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 0-12 | NP | denotes | Antioxidants |
| C2 | 21-38 | NP | denotes | monocyte adhesion |
| C3 | 54-89 | NP | denotes | nuclear factor-kappa B mobilization |
| C4 | 94-140 | NP | denotes | induction of vascular cell adhesion molecule-1 |
| C5 | 144-161 | NP | denotes | endothelial cells |
| C6 | 212-229 | NP | denotes | endothelial cells |
| C7 | 244-277 | NP | denotes | tumor necrosis factor-alpha (TNF) |
| C8 | 328-370 | NP | denotes | vascular cell adhesion molecule-1 (VCAM-1) |
| C9 | 372-422 | NP | denotes | The antioxidant pyrrolidine dithiocarbamate (PDTC) |
| C10 | 459-494 | NP | denotes | nuclear factor-kappa B (NF-kappa B) |
| C11 | 532-538 | NP | denotes | VCAM-1 |
| C12 | 605-609 | NP | denotes | PDTC |
| C13 | 691-708 | NP | denotes | monocyte adhesion |
| C14 | 773-777 | NP | denotes | PDTC |
| C15 | 978-984 | NP | denotes | HUVECs |
| C16 | 1068-1074 | NP | denotes | HUVECs |
| C17 | 1093-1097 | NP | denotes | PDTC |
| C18 | 1108-1131 | NP | denotes | NF-kappa B mobilization |
| C19 | 1135-1138 | NP | denotes | TNF |
| C20 | 1161-1177 | NP | denotes | VCAM-1 induction |
| C21 | 1196-1206 | NP | denotes | NF-kappa B |
| C22 | 1214-1220 | NP | denotes | HUVECs |
| C23 | 1263-1266 | NP | denotes | TNF |
| C24 | 1285-1291 | NP | denotes | VCAM-1 |
| C25 | 1293-1297 | NP | denotes | PDTC |
| C26 | 1452-1468 | NP | denotes | VCAM-1 induction |
| C27 | 1472-1475 | NP | denotes | TNF |
| C28 | 1543-1546 | NP | denotes | its |
| C29 | 1559-1563 | NP | denotes | PDTC |
| C30 | 1596-1628 | NP | denotes | adhesion of monocytic U937 cells |
| C31 | 1747-1760 | NP | denotes | U937 adhesion |
| C32 | 1801-1813 | NP | denotes | antioxidants |
| R1 | C6 | C5 | coref-ident | endothelial cells,endothelial cells |
| R2 | C11 | C8 | coref-ident | VCAM-1,vascular cell adhesion molecule-1 (VCAM-1) |
| R3 | C12 | C9 | coref-ident | PDTC,The antioxidant pyrrolidine dithiocarbamate (PDTC) |
| R4 | C13 | C2 | coref-ident | monocyte adhesion,monocyte adhesion |
| R5 | C14 | C12 | coref-ident | PDTC,PDTC |
| R6 | C16 | C15 | coref-ident | HUVECs,HUVECs |
| R7 | C17 | C14 | coref-ident | PDTC,PDTC |
| R8 | C18 | C3 | coref-ident | NF-kappa B mobilization,nuclear factor-kappa B mobilization |
| R9 | C19 | C7 | coref-ident | TNF,tumor necrosis factor-alpha (TNF) |
| R10 | C20 | C4 | coref-ident | VCAM-1 induction,induction of vascular cell adhesion molecule-1 |
| R11 | C21 | C10 | coref-ident | NF-kappa B,nuclear factor-kappa B (NF-kappa B) |
| R12 | C22 | C16 | coref-ident | HUVECs,HUVECs |
| R13 | C23 | C19 | coref-ident | TNF,TNF |
| R14 | C24 | C11 | coref-ident | VCAM-1,VCAM-1 |
| R15 | C25 | C17 | coref-ident | PDTC,PDTC |
| R16 | C26 | C20 | coref-ident | VCAM-1 induction,VCAM-1 induction |
| R17 | C27 | C23 | coref-ident | TNF,TNF |
| R18 | C28 | C26 | coref-pron | its,VCAM-1 induction |
| R19 | C29 | C25 | coref-ident | PDTC,PDTC |
| R20 | C31 | C30 | coref-ident | U937 adhesion,adhesion of monocytic U937 cells |
| R21 | C32 | C1 | coref-ident | antioxidants,Antioxidants |
semrep-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| E1-ti-1 | 0-12 | cui:C0003402 | denotes | Antioxidants |
| E2-ti-1 | 21-29 | cui:C0026473 | denotes | monocyte |
| E3-ti-1 | 30-38 | cui:C0001511 | denotes | adhesion |
| E4-ti-1 | 42-53 | cui:C1260953 | denotes | suppressing |
| E5-ti-1 | 54-76 | cui:C0079904 | denotes | nuclear factor-kappa B |
| E6-ti-1 | 77-89 | cui:C0300926 | denotes | mobilization |
| E7-ti-1 | 94-103 | cui:C0857127 | denotes | induction |
| E8-ti-1 | 107-140 | cui:C0078056 | denotes | vascular cell adhesion molecule-1 |
| E9-ti-1 | 144-161 | cui:C0225336 | denotes | endothelial cells |
| T1 | 13-20 | DISRUPTS | denotes | inhibit |
| T2 | 21-38 | LOCATION_OF | denotes | monocyte adhesion |
| T3 | 141-143 | LOCATION_OF | denotes | in |
| E1-ab-1 | 195-208 | cui:C0007577 | denotes | Cell adhesion |
| E2-ab-1 | 212-229 | cui:C0225336 | denotes | endothelial cells |
| E3-ab-1 | 244-271 | cui:C1448177 | denotes | tumor necrosis factor-alpha |
| E4-ab-1 | 288-297 | cui:C0857127 | denotes | induction |
| E5-ab-1 | 301-308 | cui:C0205148 | denotes | surface |
| E6-ab-1 | 309-318 | cui:C0597357 | denotes | receptors |
| E7-ab-1 | 328-361 | cui:C0078056 | denotes | vascular cell adhesion molecule-1 |
| T4 | 230-240 | AUGMENTS | denotes | stimulated |
| E1-ab-2 | 376-387 | cui:C0003402 | denotes | antioxidant |
| E2-ab-2 | 388-415 | cui:C0163305 | denotes | pyrrolidine dithiocarbamate |
| E3-ab-2 | 459-481 | cui:C0079904 | denotes | nuclear factor-kappa B |
| T5 | 376-415 | ISA | denotes | antioxidant pyrrolidine dithiocarbamate |
| E1-ab-3 | 502-507 | cui:C0439099 | denotes | kappa |
| E2-ab-3 | 521-528 | cui:C0150312 | denotes | present |
| E3-ab-3 | 532-538 | cui:C0078056 | denotes | VCAM-1 |
| E4-ab-3 | 543-576 | cui:C0063695 | denotes | intercellular adhesion molecule-1 |
| E5-ab-3 | 586-595 | cui:C0086860 | denotes | promoters |
| E6-ab-3 | 605-609 | cui:C0163305 | denotes | PDTC |
| E7-ab-3 | 623-633 | cui:C0220905 | denotes | regulatory |
| E8-ab-3 | 634-644 | cui:C0441712 | denotes | mechanisms |
| E9-ab-3 | 648-654 | cui:C0078056 | denotes | VCAM-1 |
| E10-ab-3 | 659-665 | cui:C0063695 | denotes | ICAM-1 |
| E11-ab-3 | 666-675 | cui:C0857127 | denotes | induction |
| E12-ab-3 | 680-690 | cui:C0750530 | denotes | subsequent |
| E13-ab-3 | 691-699 | cui:C0026473 | denotes | monocyte |
| E14-ab-3 | 700-708 | cui:C0001511 | denotes | adhesion |
| E15-ab-3 | 712-715 | cui:C1448177 | denotes | TNF |
| E16-ab-3 | 716-723 | cui:C1522326 | denotes | treated |
| E17-ab-3 | 730-744 | cui:C0041637 | denotes | umbilical vein |
| E18-ab-3 | 745-756 | cui:C0669365 | denotes | endothelial |
| E19-ab-3 | 724-762 | cui:C0427861 | denotes | human umbilical vein endothelial cells |
| T6 | 691-708 | LOCATION_OF | denotes | monocyte adhesion |
| E1-ab-4 | 773-777 | cui:C0163305 | denotes | PDTC |
| E2-ab-4 | 781-797 | cui:C0001047 | denotes | N-acetylcysteine |
| E3-ab-4 | 798-802 | cui:C1446466 | denotes | dose |
| E4-ab-4 | 815-822 | cui:C0392756 | denotes | reduced |
| E5-ab-4 | 823-826 | cui:C1448177 | denotes | TNF |
| E6-ab-4 | 827-834 | cui:C0205263 | denotes | induced |
| E7-ab-4 | 835-841 | cui:C0078056 | denotes | VCAM-1 |
| E8-ab-4 | 846-849 | cui:C1518422 | denotes | not |
| E9-ab-4 | 850-856 | cui:C0063695 | denotes | ICAM-1 |
| E10-ab-4 | 857-872 | cui:C0025252 | denotes | surface protein |
| E11-ab-4 | 888-906 | cui:C0041632 | denotes | umbilical arterial |
| E12-ab-4 | 907-918 | cui:C0669365 | denotes | endothelial |
| E13-ab-4 | 882-924 | cui:C0427861 | denotes | human umbilical arterial endothelial cells |
| E14-ab-4 | 930-945 | cui:C1515670 | denotes | mRNA expression |
| E15-ab-4 | 969-973 | cui:C0163305 | denotes | PDTC |
| E16-ab-4 | 978-984 | cui:C0020114 | denotes | HUVECs |
| E17-ab-4 | 978-984 | cui:C0041637 | denotes | HUVECs |
| E18-ab-4 | 978-984 | cui:C0225336 | denotes | HUVECs |
| E19-ab-4 | 1000-1014 | cui:C0016263 | denotes | flow cytometry |
| E20-ab-4 | 1019-1044 | cui:C0032520 | denotes | polymerase chain reaction |
| T7 | 975-977 | LOCATION_OF | denotes | in |
| T8 | 975-977 | LOCATION_OF | denotes | in |
| E1-ab-5 | 1046-1064 | cui:C0598490 | denotes | Gel-shift analysis |
| E2-ab-5 | 1068-1074 | cui:C0020114 | denotes | HUVECs |
| E3-ab-5 | 1068-1074 | cui:C0041637 | denotes | HUVECs |
| E4-ab-5 | 1068-1074 | cui:C0225336 | denotes | HUVECs |
| E5-ab-5 | 1093-1097 | cui:C0163305 | denotes | PDTC |
| E6-ab-5 | 1108-1118 | cui:C0079904 | denotes | NF-kappa B |
| E7-ab-5 | 1119-1131 | cui:C0300926 | denotes | mobilization |
| E8-ab-5 | 1135-1138 | cui:C1448177 | denotes | TNF |
| E9-ab-5 | 1161-1167 | cui:C0078056 | denotes | VCAM-1 |
| E10-ab-5 | 1168-1177 | cui:C0857127 | denotes | induction |
| E11-ab-5 | 1196-1206 | cui:C0079904 | denotes | NF-kappa B |
| T9 | 1168-1177 | STIMULATES | denotes | induction |
| T10 | 1182-1192 | INTERACTS_WITH | denotes | controlled |
| E1-ab-6 | 1214-1220 | cui:C0020114 | denotes | HUVECs |
| E2-ab-6 | 1214-1220 | cui:C0041637 | denotes | HUVECs |
| E3-ab-6 | 1214-1220 | cui:C0225336 | denotes | HUVECs |
| E4-ab-6 | 1230-1247 | cui:C0038836 | denotes | superoxide anions |
| E5-ab-6 | 1251-1259 | cui:C0871261 | denotes | response |
| E6-ab-6 | 1263-1266 | cui:C1448177 | denotes | TNF |
| E7-ab-6 | 1272-1276 | cui:C0020281 | denotes | H2O2 |
| E8-ab-6 | 1285-1291 | cui:C0078056 | denotes | VCAM-1 |
| E9-ab-6 | 1293-1297 | cui:C0163305 | denotes | PDTC |
| E10-ab-6 | 1311-1318 | cui:C0302912 | denotes | radical |
| E11-ab-6 | 1319-1328 | cui:C1003377 | denotes | scavenger |
| T11 | 1277-1284 | STIMULATES | denotes | induces |
| E1-ab-7 | 1339-1345 | cui:C0063695 | denotes | ICAM-1 |
| E2-ab-7 | 1346-1355 | cui:C0857127 | denotes | induction |
| E3-ab-7 | 1372-1382 | cui:C0243077 | denotes | inhibitors |
| E4-ab-7 | 1386-1399 | cui:C0068355 | denotes | NADPH oxidase |
| E5-ab-7 | 1401-1409 | cui:C0050465 | denotes | apocynin |
| E6-ab-7 | 1414-1430 | cui:C0010762 | denotes | cytochrome P-450 |
| E7-ab-7 | 1432-1439 | cui:C0618948 | denotes | SKF525a |
| E8-ab-7 | 1452-1458 | cui:C0078056 | denotes | VCAM-1 |
| E9-ab-7 | 1459-1468 | cui:C0857127 | denotes | induction |
| E10-ab-7 | 1472-1475 | cui:C1448177 | denotes | TNF |
| E11-ab-7 | 1492-1499 | cui:C0443302 | denotes | several |
| E12-ab-7 | 1500-1507 | cui:C0302912 | denotes | radical |
| E13-ab-7 | 1519-1526 | cui:C0449913 | denotes | systems |
| E14-ab-7 | 1547-1557 | cui:C0851285 | denotes | regulation |
| T12 | 1346-1355 | STIMULATES | denotes | induction |
| T13 | 1346-1355 | STIMULATES | denotes | induction |
| T14 | 1459-1468 | STIMULATES | denotes | induction |
| E1-ab-8 | 1559-1563 | cui:C0163305 | denotes | PDTC |
| E2-ab-8 | 1565-1573 | cui:C0050465 | denotes | apocynin |
| E3-ab-8 | 1578-1585 | cui:C0618948 | denotes | SKF525a |
| E4-ab-8 | 1596-1604 | cui:C0001511 | denotes | adhesion |
| E5-ab-8 | 1608-1617 | cui:C0026473 | denotes | monocytic |
| E6-ab-8 | 1618-1628 | cui:C0600531 | denotes | U937 cells |
| E7-ab-8 | 1632-1635 | cui:C1448177 | denotes | TNF |
| E8-ab-8 | 1636-1643 | cui:C1522326 | denotes | treated |
| E9-ab-8 | 1644-1650 | cui:C0041637 | denotes | HUVECs |
| E10-ab-8 | 1644-1650 | cui:C0669365 | denotes | HUVECs |
| E11-ab-8 | 1644-1650 | cui:C0427861 | denotes | HUVECs |
| E12-ab-8 | 1674-1678 | cui:C0163305 | denotes | PDTC |
| T15 | 1586-1595 | PREVENTS | denotes | decreased |
| T16 | 1586-1595 | PREVENTS | denotes | decreased |
| T17 | 1586-1595 | PREVENTS | denotes | decreased |
| T18 | 1605-1607 | LOCATION_OF | denotes | of |
| E1-ab-9 | 1700-1706 | cui:C0078056 | denotes | VCAM-1 |
| E2-ab-9 | 1707-1717 | cui:C0746619 | denotes | monoclonal |
| E3-ab-9 | 1695-1726 | cui:C0003242 | denotes | anti-VCAM-1 monoclonal antibody |
| E4-ab-9 | 1752-1760 | cui:C0001511 | denotes | adhesion |
| E5-ab-9 | 1765-1771 | cui:C0078056 | denotes | VCAM-1 |
| E6-ab-9 | 1786-1797 | cui:C0439181 | denotes | suppression |
| E7-ab-9 | 1801-1813 | cui:C0003402 | denotes | antioxidants |
| E8-ab-9 | 1825-1832 | cui:C0392756 | denotes | reduced |
| E9-ab-9 | 1833-1839 | cui:C0078056 | denotes | VCAM-1 |
| E10-ab-9 | 1840-1849 | cui:C0857127 | denotes | induction |
| T19 | 1840-1849 | STIMULATES | denotes | induction |
| R1 | E1-ti-1 | T1 | subjectOf | Antioxidants,inhibit |
| R2 | E3-ti-1 | T1 | objectOf | adhesion,inhibit |
| R3 | E2-ti-1 | T2 | subjectOf | monocyte,monocyte adhesion |
| R4 | E3-ti-1 | T2 | objectOf | adhesion,monocyte adhesion |
| R5 | E9-ti-1 | T3 | subjectOf | endothelial cells,in |
| R6 | E8-ti-1 | T3 | objectOf | vascular cell adhesion molecule-1,in |
| R7 | E3-ab-1 | T4 | subjectOf | tumor necrosis factor-alpha,stimulated |
| R8 | E2-ab-1 | T4 | objectOf | endothelial cells,stimulated |
| R9 | E2-ab-2 | T5 | subjectOf | pyrrolidine dithiocarbamate,antioxidant pyrrolidine dithiocarbamate |
| R10 | E1-ab-2 | T5 | objectOf | antioxidant,antioxidant pyrrolidine dithiocarbamate |
| R11 | E13-ab-3 | T6 | subjectOf | monocyte,monocyte adhesion |
| R12 | E14-ab-3 | T6 | objectOf | adhesion,monocyte adhesion |
| R13 | E18-ab-4 | T7 | subjectOf | HUVECs,in |
| R14 | E10-ab-4 | T7 | objectOf | surface protein,in |
| R15 | E18-ab-4 | T8 | subjectOf | HUVECs,in |
| R16 | E1-ab-4 | T8 | objectOf | PDTC,in |
| R17 | E8-ab-5 | T9 | subjectOf | TNF,induction |
| R18 | E9-ab-5 | T9 | objectOf | VCAM-1,induction |
| R19 | E11-ab-5 | T10 | subjectOf | NF-kappa B,controlled |
| R20 | E5-ab-5 | T10 | objectOf | PDTC,controlled |
| R21 | E7-ab-6 | T11 | subjectOf | H2O2,induces |
| R22 | E8-ab-6 | T11 | objectOf | VCAM-1,induces |
| R23 | E5-ab-7 | T12 | subjectOf | apocynin,induction |
| R24 | E1-ab-7 | T12 | objectOf | ICAM-1,induction |
| R25 | E6-ab-7 | T13 | subjectOf | cytochrome P-450,induction |
| R26 | E1-ab-7 | T13 | objectOf | ICAM-1,induction |
| R27 | E10-ab-7 | T14 | subjectOf | TNF,induction |
| R28 | E8-ab-7 | T14 | objectOf | VCAM-1,induction |
| R29 | E3-ab-8 | T15 | subjectOf | SKF525a,decreased |
| R30 | E4-ab-8 | T15 | objectOf | adhesion,decreased |
| R31 | E2-ab-8 | T16 | subjectOf | apocynin,decreased |
| R32 | E4-ab-8 | T16 | objectOf | adhesion,decreased |
| R33 | E1-ab-8 | T17 | subjectOf | PDTC,decreased |
| R34 | E4-ab-8 | T17 | objectOf | adhesion,decreased |
| R35 | E6-ab-8 | T18 | subjectOf | U937 cells,of |
| R36 | E4-ab-8 | T18 | objectOf | adhesion,of |
| R37 | E7-ab-9 | T19 | subjectOf | antioxidants,induction |
| R38 | E9-ab-9 | T19 | objectOf | VCAM-1,induction |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-194 | Sentence | denotes | Antioxidants inhibit monocyte adhesion by suppressing nuclear factor-kappa B mobilization and induction of vascular cell adhesion molecule-1 in endothelial cells stimulated to generate radicals. |
| S2 | 195-371 | Sentence | denotes | Cell adhesion to endothelial cells stimulated by tumor necrosis factor-alpha (TNF) is due to induction of surface receptors, such as vascular cell adhesion molecule-1 (VCAM-1). |
| S3 | 372-495 | Sentence | denotes | The antioxidant pyrrolidine dithiocarbamate (PDTC) specifically inhibits activation of nuclear factor-kappa B (NF-kappa B). |
| S4 | 496-772 | Sentence | denotes | Since kappa B motifs are present in VCAM-1 and intercellular adhesion molecule-1 (ICAM-1) promoters, we used PDTC to study the regulatory mechanisms of VCAM-1 and ICAM-1 induction and subsequent monocyte adhesion in TNF-treated human umbilical vein endothelial cells (HUVECs). |
| S5 | 773-1045 | Sentence | denotes | PDTC or N-acetylcysteine dose dependently reduced TNF-induced VCAM-1 but not ICAM-1 surface protein (also in human umbilical arterial endothelial cells) and mRNA expression (by 70% at 100 mumol/L PDTC) in HUVECs as assessed by flow cytometry and polymerase chain reaction. |
| S6 | 1046-1207 | Sentence | denotes | Gel-shift analysis in HUVECs demonstrated that PDTC prevented NF-kappa B mobilization by TNF, suggesting that only VCAM-1 induction was controlled by NF-kappa B. |
| S7 | 1208-1329 | Sentence | denotes | Since HUVECs released superoxide anions in response to TNF, and H2O2 induces VCAM-1, PDTC may act as a radical scavenger. |
| S8 | 1330-1558 | Sentence | denotes | Although ICAM-1 induction was unaffected, inhibitors of NADPH oxidase (apocynin) or cytochrome P-450 (SKF525a) suppressed VCAM-1 induction by TNF, revealing that several radical-generating systems are involved in its regulation. |
| S9 | 1559-1680 | Sentence | denotes | PDTC, apocynin, or SKF525a decreased adhesion of monocytic U937 cells to TNF-treated HUVECs (by 75% at 100 mumol/L PDTC). |
| S10 | 1681-1850 | Sentence | denotes | Inhibition by anti-VCAM-1 monoclonal antibody 1G11 indicated that U937 adhesion was VCAM-1 dependent and suppression by antioxidants was due to reduced VCAM-1 induction. |
| S11 | 1850-1883 | Sentence | denotes | (ABSTRACT TRUNCATED AT 250 WORDS) |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-12 | other_organic_compound | denotes | Antioxidants |
| T2 | 21-29 | cell_type | denotes | monocyte |
| T3 | 54-76 | protein_molecule | denotes | nuclear factor-kappa B |
| T4 | 107-140 | protein_molecule | denotes | vascular cell adhesion molecule-1 |
| T5 | 144-161 | cell_type | denotes | endothelial cells |
| T6 | 185-193 | inorganic | denotes | radicals |
| T7 | 195-208 | other_name | denotes | Cell adhesion |
| T8 | 212-229 | cell_type | denotes | endothelial cells |
| T9 | 230-271 | protein_molecule | denotes | stimulated by tumor necrosis factor-alpha |
| T10 | 273-276 | protein_molecule | denotes | TNF |
| T11 | 301-318 | protein_family_or_group | denotes | surface receptors |
| T12 | 328-361 | protein_molecule | denotes | vascular cell adhesion molecule-1 |
| T13 | 363-369 | protein_molecule | denotes | VCAM-1 |
| T14 | 388-415 | other_organic_compound | denotes | pyrrolidine dithiocarbamate |
| T15 | 417-421 | other_organic_compound | denotes | PDTC |
| T16 | 459-481 | protein_molecule | denotes | nuclear factor-kappa B |
| T17 | 483-493 | protein_molecule | denotes | NF-kappa B |
| T18 | 502-516 | DNA_domain_or_region | denotes | kappa B motifs |
| T19 | 532-538 | DNA_domain_or_region | denotes | VCAM-1 |
| T20 | 543-576 | protein_molecule | denotes | intercellular adhesion molecule-1 |
| T21 | 578-584 | protein_molecule | denotes | ICAM-1 |
| T22 | 605-609 | other_organic_compound | denotes | PDTC |
| T23 | 648-654 | protein_molecule | denotes | VCAM-1 |
| T24 | 659-665 | protein_molecule | denotes | ICAM-1 |
| T25 | 691-699 | cell_type | denotes | monocyte |
| T26 | 712-744 | cell_line | denotes | TNF-treated human umbilical vein |
| T27 | 745-762 | cell_type | denotes | endothelial cells |
| T28 | 764-770 | cell_line | denotes | HUVECs |
| T29 | 773-777 | other_organic_compound | denotes | PDTC |
| T30 | 823-834 | protein_molecule | denotes | TNF-induced |
| T31 | 835-841 | protein_molecule | denotes | VCAM-1 |
| T32 | 850-856 | protein_molecule | denotes | ICAM-1 |
| T33 | 882-906 | cell_type | denotes | human umbilical arterial |
| T34 | 907-924 | cell_type | denotes | endothelial cells |
| T35 | 930-945 | other_name | denotes | mRNA expression |
| T36 | 969-973 | other_organic_compound | denotes | PDTC |
| T37 | 978-984 | cell_line | denotes | HUVECs |
| T38 | 1000-1014 | other_name | denotes | flow cytometry |
| T39 | 1019-1044 | other_name | denotes | polymerase chain reaction |
| T40 | 1068-1074 | cell_line | denotes | HUVECs |
| T41 | 1093-1097 | other_organic_compound | denotes | PDTC |
| T42 | 1108-1118 | protein_molecule | denotes | NF-kappa B |
| T43 | 1135-1138 | protein_family_or_group | denotes | TNF |
| T44 | 1161-1167 | protein_molecule | denotes | VCAM-1 |
| T45 | 1196-1206 | protein_molecule | denotes | NF-kappa B |
| T46 | 1214-1220 | cell_line | denotes | HUVECs |
| T47 | 1230-1247 | inorganic | denotes | superoxide anions |
| T48 | 1285-1291 | protein_molecule | denotes | VCAM-1 |
| T49 | 1293-1297 | other_organic_compound | denotes | PDTC |
| T50 | 1311-1328 | other_name | denotes | radical scavenger |
| T51 | 1339-1345 | protein_molecule | denotes | ICAM-1 |
| T52 | 1386-1399 | protein_molecule | denotes | NADPH oxidase |
| T53 | 1401-1409 | other_organic_compound | denotes | apocynin |
| T54 | 1414-1430 | protein_molecule | denotes | cytochrome P-450 |
| T55 | 1432-1439 | other_organic_compound | denotes | SKF525a |
| T56 | 1452-1458 | protein_molecule | denotes | VCAM-1 |
| T57 | 1500-1526 | other_name | denotes | radical-generating systems |
| T58 | 1559-1563 | other_organic_compound | denotes | PDTC |
| T59 | 1565-1573 | other_organic_compound | denotes | apocynin |
| T60 | 1578-1585 | other_organic_compound | denotes | SKF525a |
| T61 | 1608-1628 | cell_line | denotes | monocytic U937 cells |
| T62 | 1632-1643 | cell_line | denotes | TNF-treated |
| T63 | 1644-1650 | cell_line | denotes | HUVECs |
| T64 | 1674-1678 | other_organic_compound | denotes | PDTC |
| T65 | 1695-1700 | protein_molecule | denotes | anti- |
| T66 | 1700-1706 | protein_molecule | denotes | VCAM-1 |
| T67 | 1727-1731 | protein_molecule | denotes | 1G11 |
| T68 | 1747-1751 | cell_line | denotes | U937 |
| T69 | 1765-1771 | protein_molecule | denotes | VCAM-1 |
| T70 | 1801-1813 | other_name | denotes | antioxidants |
| T71 | 1833-1839 | protein_molecule | denotes | VCAM-1 |
metamap-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1453-1459 | C0078056 | denotes | CAM-1 |
| T2 | 1286-1292 | C0078056 | denotes | CAM-1, |
| T3 | 1162-1168 | C0078056 | denotes | CAM-1 |
| T4 | 836-842 | C0078056 | denotes | CAM-1 |
| T5 | 108-141 | C0078056 | denotes | ascular cell adhesion molecule-1 |
| T6 | 1609-1618 | C0026473 | denotes | onocytic |
| T7 | 692-700 | C0026473 | denotes | onocyte |
| T8 | 22-30 | C0026473 | denotes | onocyte |
| T9 | 1753-1761 | C0001511 | denotes | dhesion |
| T10 | 1597-1605 | C0001511 | denotes | dhesion |
| T11 | 701-709 | C0001511 | denotes | dhesion |
| T12 | 31-39 | C0001511 | denotes | dhesion |
| T13 | 1802-1813 | C0003402 | denotes | ntioxidants |
| T14 | 377-388 | C0003402 | denotes | ntioxidant |
| T15 | 1-13 | C0003402 | denotes | ntioxidants |
| T16 | 460-482 | C0079904 | denotes | uclear factor-kappa B |
| T17 | 55-76 | C0079904 | denotes | uclear factor-kappa B |
| T18 | 437-445 | C0018790 | denotes | nhibits |
| T19 | 14-21 | C0018790 | denotes | nhibit |
| T20 | 174-176 | C1883351 | denotes | o |
| T21 | 1633-1636 | C1456820 | denotes | NF- |
| T22 | 1473-1476 | C1456820 | denotes | NF, |
| T23 | 1264-1267 | C1456820 | denotes | NF, |
| T24 | 824-827 | C1456820 | denotes | NF- |
| T25 | 713-716 | C1456820 | denotes | NF- |
| T26 | 245-271 | C1456820 | denotes | umor necrosis factor-alpha |
| T27 | 231-241 | C1948023 | denotes | timulated |
| T28 | 163-173 | C1948023 | denotes | timulated |
| T29 | 1501-1508 | C0302912 | denotes | adical- |
| T30 | 1312-1319 | C0302912 | denotes | adical |
| T31 | 186-194 | C0302912 | denotes | adicals. |
| T32 | 1841-1850 | C0205263 | denotes | nduction. |
| T33 | 1278-1285 | C0205263 | denotes | nduces |
| T34 | 1169-1178 | C0205263 | denotes | nduction |
| T35 | 667-676 | C0205263 | denotes | nduction |
| T36 | 289-298 | C0205263 | denotes | nduction |
| T37 | 95-104 | C0205263 | denotes | nduction |
| T38 | 1442-1452 | C1260953 | denotes | uppressed |
| T39 | 43-54 | C1260953 | denotes | uppressing |
| T40 | 1120-1132 | C0185112 | denotes | obilization |
| T41 | 78-90 | C0185112 | denotes | obilization |
| T42 | 1340-1346 | C0063695 | denotes | CAM-1 |
| T43 | 851-857 | C0063695 | denotes | CAM-1 |
| T44 | 660-666 | C0063695 | denotes | CAM-1 |
| T45 | 544-576 | C0063695 | denotes | ntercellular adhesion molecule-1 |
| T46 | 1645-1651 | C3179121 | denotes | UVECs |
| T47 | 1215-1221 | C3179121 | denotes | UVECs |
| T48 | 1069-1075 | C3179121 | denotes | UVECs |
| T49 | 979-985 | C3179121 | denotes | UVECs |
| T50 | 1294-1298 | C1313719 | denotes | DTC |
| T51 | 1094-1098 | C1313719 | denotes | DTC |
| T52 | 606-610 | C1313719 | denotes | DTC |
| T53 | 389-416 | C1313719 | denotes | yrrolidine dithiocarbamate |
| T54 | 1294-1298 | C0163305 | denotes | DTC |
| T55 | 1094-1098 | C0163305 | denotes | DTC |
| T56 | 606-610 | C0163305 | denotes | DTC |
| T57 | 389-416 | C0163305 | denotes | yrrolidine dithiocarbamate |
| T58 | 1579-1586 | C0618948 | denotes | KF525a |
| T59 | 1433-1440 | C0618948 | denotes | KF525a) |
| T60 | 1566-1574 | C0050465 | denotes | pocynin, |
| T61 | 1402-1410 | C0050465 | denotes | pocynin) |
| T62 | 1303-1306 | C0079613 | denotes | ct |
| T63 | 1273-1277 | C0020281 | denotes | 2O2 |
| T64 | 1001-1015 | C0016263 | denotes | low cytometry |
| T65 | 1231-1248 | C0038836 | denotes | uperoxide anions |
| T66 | 511-517 | C1514562 | denotes | otifs |
| T67 | 1415-1430 | C0010762 | denotes | ytochrome P-450 |
| T68 | 1619-1629 | C0600531 | denotes | 937 cells |
| T69 | 782-798 | C0001047 | denotes | -acetylcysteine |
| T70 | 1020-1045 | C0032520 | denotes | olymerase chain reaction. |
| T71 | 1047-1065 | C0598490 | denotes | el-shift analysis |
| T72 | 889-898 | C0041638 | denotes | mbilical |
| T73 | 858-873 | C0025252 | denotes | urface protein |
| T74 | 1819-1825 | C0678226 | denotes | ue to |
| T75 | 282-288 | C0678226 | denotes | ue to |
| T76 | 1637-1644 | C0332293 | denotes | reated |
| T77 | 717-724 | C0332293 | denotes | reated |
| T78 | 1320-1329 | C0017108 | denotes | cavenger. |
| T79 | 1587-1596 | C0205216 | denotes | ecreased |
| T80 | 1733-1742 | C1444656 | denotes | ndicated |
| T81 | 1222-1230 | C0391871 | denotes | eleased |
| T82 | 1478-1487 | C0443289 | denotes | evealing |
| T83 | 614-619 | C2603343 | denotes | tudy |
| T84 | 601-605 | C1273517 | denotes | sed |
| T85 | 931-946 | C1515670 | denotes | RNA expression |
| T86 | 1099-1108 | C0309872 | denotes | revented |
| T87 | 1141-1151 | C1705535 | denotes | uggesting |
| T88 | 587-596 | C0086860 | denotes | romoters, |
| T89 | 1773-1782 | C1701901 | denotes | ependent |
| T90 | 1183-1195 | C0332298 | denotes | ontrolled by |
| T91 | 1787-1798 | C0301625 | denotes | uppression |
| T92 | 799-803 | C1114758 | denotes | ose |
| T93 | 1520-1527 | C0449913 | denotes | ystems |
| T94 | 989-997 | C1516048 | denotes | ssessed |
| T95 | 1532-1540 | C1314939 | denotes | nvolved |
| T96 | 1548-1558 | C1327622 | denotes | egulation. |
| T97 | 1373-1383 | C0243077 | denotes | nhibitors |
| T98 | 1415-1430 | C1149063 | denotes | ytochrome P-450 |
| T99 | 446-456 | C1879547 | denotes | ctivation |
| T100 | 522-529 | C0150312 | denotes | resent |
| T101 | 302-309 | C0205148 | denotes | urface |
| T102 | 310-319 | C0597357 | denotes | eceptors, |
| T103 | 899-919 | C1179025 | denotes | rterial endothelial |
| T104 | 635-645 | C0441712 | denotes | echanisms |
| T105 | 1826-1833 | C0392756 | denotes | educed |
| T106 | 1815-1818 | C1421478 | denotes | as |
| T107 | 1682-1692 | C0021469 | denotes | nhibition |
| T108 | 681-691 | C0332282 | denotes | ubsequent |
| T109 | 503-508 | C0439099 | denotes | appa |
| T110 | 1493-1499 | C0439064 | denotes | everal |
| T111 | 1387-1400 | C1151146 | denotes | ADPH oxidase |
| T112 | 847-850 | C1518422 | denotes | ot |
| T113 | 1157-1161 | C0205171 | denotes | nly |
| T114 | 1252-1260 | C1704632 | denotes | esponse |
| T115 | 1361-1371 | C2986417 | denotes | naffected, |
| T116 | 624-634 | C1704735 | denotes | egulatory |
| T117 | 1708-1718 | C0746619 | denotes | onoclonal |