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sentences

Id Subject Object Predicate Lexical cue
T1 0-118 Sentence denotes rel Is rapidly tyrosine-phosphorylated following granulocyte-colony stimulating factor treatment of human neutrophils.
T2 119-292 Sentence denotes Stimulation of neutrophils with granulocyte-colony stimulating factor (G-CSF) results in an enhanced respiratory burst, prolonged survival, and increased tumor cell killing.
T3 293-375 Sentence denotes The effects of G-CSF are mediated by binding to specific, high affinity receptors.
T4 376-523 Sentence denotes G-CSF receptors lack intrinsic tyrosine kinase activity, but activation of the receptor results in the rapid induction of tyrosine kinase activity.
T5 524-727 Sentence denotes Antiphosphotyrosine immunoblots of whole cell lysates prepared from neutrophils show that the G-CSF rapidly induces prominent tyrosine phosphorylation of a protein of a relative molecular mass of 80 kDa.
T6 728-922 Sentence denotes Using monospecific antibodies, the 80-kDa tyrosine-phosphorylated protein has been shown to be p80c-rel, a proto-oncogene belonging to a family of transcriptional regulators which include NF-kB.
T7 923-1181 Sentence denotes The induction of tyrosine phosphorylation of p80c-rel was unique to G-CSF in that granulocyte-macrophage colony stimulating factor which also stimulates neutrophils and induces tyrosine phosphorylation does not result in tyrosine phosphorylation of p80c-rel.
T8 1182-1417 Sentence denotes The consequences of p80c-rel tyrosine phosphorylation are not yet known; however, tyrosine-phosphorylated p80c-rel is capable of binding to DNA, and G-CSF stimulation results in an increase in the amount of p80c-rel which binds to DNA.
T9 1418-1634 Sentence denotes These results demonstrate that one of the first biochemical events which occurs in neutrophils following G-CSF stimulation, activation of a tyrosine kinase, leads directly to the tyrosine phosphorylation of p80c-rel.
T10 1635-1779 Sentence denotes Thus, the tyrosine kinase activated by G-CSF appears to directly transduce a signal to a protein which functions as a transcriptional regulator.
T1 0-118 Sentence denotes rel Is rapidly tyrosine-phosphorylated following granulocyte-colony stimulating factor treatment of human neutrophils.
T2 119-292 Sentence denotes Stimulation of neutrophils with granulocyte-colony stimulating factor (G-CSF) results in an enhanced respiratory burst, prolonged survival, and increased tumor cell killing.
T3 293-375 Sentence denotes The effects of G-CSF are mediated by binding to specific, high affinity receptors.
T4 376-523 Sentence denotes G-CSF receptors lack intrinsic tyrosine kinase activity, but activation of the receptor results in the rapid induction of tyrosine kinase activity.
T5 524-727 Sentence denotes Antiphosphotyrosine immunoblots of whole cell lysates prepared from neutrophils show that the G-CSF rapidly induces prominent tyrosine phosphorylation of a protein of a relative molecular mass of 80 kDa.
T6 728-922 Sentence denotes Using monospecific antibodies, the 80-kDa tyrosine-phosphorylated protein has been shown to be p80c-rel, a proto-oncogene belonging to a family of transcriptional regulators which include NF-kB.
T7 923-1181 Sentence denotes The induction of tyrosine phosphorylation of p80c-rel was unique to G-CSF in that granulocyte-macrophage colony stimulating factor which also stimulates neutrophils and induces tyrosine phosphorylation does not result in tyrosine phosphorylation of p80c-rel.
T8 1182-1417 Sentence denotes The consequences of p80c-rel tyrosine phosphorylation are not yet known; however, tyrosine-phosphorylated p80c-rel is capable of binding to DNA, and G-CSF stimulation results in an increase in the amount of p80c-rel which binds to DNA.
T9 1418-1634 Sentence denotes These results demonstrate that one of the first biochemical events which occurs in neutrophils following G-CSF stimulation, activation of a tyrosine kinase, leads directly to the tyrosine phosphorylation of p80c-rel.
T10 1635-1779 Sentence denotes Thus, the tyrosine kinase activated by G-CSF appears to directly transduce a signal to a protein which functions as a transcriptional regulator.

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-3 protein denotes rel
T2 49-86 protein denotes granulocyte-colony stimulating factor
T3 134-145 cell_type denotes neutrophils
T4 151-188 protein denotes granulocyte-colony stimulating factor
T5 190-195 protein denotes G-CSF
T6 308-313 protein denotes G-CSF
T7 356-374 protein denotes affinity receptors
T8 376-391 protein denotes G-CSF receptors
T9 407-422 protein denotes tyrosine kinase
T10 592-603 cell_type denotes neutrophils
T11 618-623 protein denotes G-CSF
T12 734-757 protein denotes monospecific antibodies
T13 770-801 protein denotes tyrosine-phosphorylated protein
T14 823-831 protein denotes p80c-rel
T15 835-849 DNA denotes proto-oncogene
T16 875-901 protein denotes transcriptional regulators
T17 916-921 protein denotes NF-kB
T18 968-976 protein denotes p80c-rel
T19 991-996 protein denotes G-CSF
T20 1005-1053 protein denotes granulocyte-macrophage colony stimulating factor
T21 1076-1087 cell_type denotes neutrophils
T22 1172-1180 protein denotes p80c-rel
T23 1202-1210 protein denotes p80c-rel
T24 1288-1296 protein denotes p80c-rel
T25 1331-1336 protein denotes G-CSF
T26 1389-1397 protein denotes p80c-rel
T27 1501-1512 cell_type denotes neutrophils
T28 1523-1528 protein denotes G-CSF
T29 1558-1573 protein denotes tyrosine kinase
T30 1625-1633 protein denotes p80c-rel
T31 1645-1660 protein denotes tyrosine kinase
T32 1674-1679 protein denotes G-CSF
T33 1753-1778 protein denotes transcriptional regulator

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 49-86 NP denotes granulocyte-colony stimulating factor
C2 100-117 NP denotes human neutrophils
C3 134-145 NP denotes neutrophils
C4 151-196 NP denotes granulocyte-colony stimulating factor (G-CSF)
C5 308-313 NP denotes G-CSF
C6 592-603 NP denotes neutrophils
C7 614-623 NP denotes the G-CSF
C8 823-831 NP denotes p80c-rel
C9 875-901 NP denotes transcriptional regulators
C10 902-907 NP denotes which
C11 968-976 NP denotes p80c-rel
C12 991-996 NP denotes G-CSF
C13 1005-1053 NP denotes granulocyte-macrophage colony stimulating factor
C14 1054-1059 NP denotes which
C15 1076-1087 NP denotes neutrophils
C17 1172-1180 NP denotes p80c-rel
C16 1144-1180 NP denotes tyrosine phosphorylation of p80c-rel
C18 1202-1235 NP denotes p80c-rel tyrosine phosphorylation
C19 1322-1325 NP denotes DNA
C20 1389-1397 NP denotes p80c-rel
C21 1398-1403 NP denotes which
C22 1413-1416 NP denotes DNA
C23 1449-1484 NP denotes one of the first biochemical events
C24 1485-1490 NP denotes which
C26 1625-1633 NP denotes p80c-rel
C25 1593-1633 NP denotes the tyrosine phosphorylation of p80c-rel
C27 1674-1679 NP denotes G-CSF
C28 1722-1731 NP denotes a protein
C29 1732-1737 NP denotes which
R1 C3 C2 coref-ident neutrophils,human neutrophils
R2 C4 C1 coref-ident granulocyte-colony stimulating factor (G-CSF),granulocyte-colony stimulating factor
R3 C5 C4 coref-ident G-CSF,granulocyte-colony stimulating factor (G-CSF)
R4 C6 C3 coref-ident neutrophils,neutrophils
R5 C7 C5 coref-ident the G-CSF,G-CSF
R6 C10 C9 coref-relat which,transcriptional regulators
R7 C11 C8 coref-ident p80c-rel,p80c-rel
R8 C12 C7 coref-ident G-CSF,the G-CSF
R9 C14 C13 coref-relat which,granulocyte-macrophage colony stimulating factor
R10 C15 C6 coref-ident neutrophils,neutrophils
R11 C18 C16 coref-ident p80c-rel tyrosine phosphorylation,tyrosine phosphorylation of p80c-rel
R12 C20 C17 coref-ident p80c-rel,p80c-rel
R13 C21 C20 coref-relat which,p80c-rel
R14 C22 C19 coref-ident DNA,DNA
R15 C24 C23 coref-relat which,one of the first biochemical events
R16 C26 C20 coref-ident p80c-rel,p80c-rel
R17 C25 C18 coref-ident the tyrosine phosphorylation of p80c-rel,p80c-rel tyrosine phosphorylation
R18 C27 C12 coref-ident G-CSF,G-CSF

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-118 Sentence denotes rel Is rapidly tyrosine-phosphorylated following granulocyte-colony stimulating factor treatment of human neutrophils.
S2 119-292 Sentence denotes Stimulation of neutrophils with granulocyte-colony stimulating factor (G-CSF) results in an enhanced respiratory burst, prolonged survival, and increased tumor cell killing.
S3 293-375 Sentence denotes The effects of G-CSF are mediated by binding to specific, high affinity receptors.
S4 376-523 Sentence denotes G-CSF receptors lack intrinsic tyrosine kinase activity, but activation of the receptor results in the rapid induction of tyrosine kinase activity.
S5 524-727 Sentence denotes Antiphosphotyrosine immunoblots of whole cell lysates prepared from neutrophils show that the G-CSF rapidly induces prominent tyrosine phosphorylation of a protein of a relative molecular mass of 80 kDa.
S6 728-922 Sentence denotes Using monospecific antibodies, the 80-kDa tyrosine-phosphorylated protein has been shown to be p80c-rel, a proto-oncogene belonging to a family of transcriptional regulators which include NF-kB.
S7 923-1181 Sentence denotes The induction of tyrosine phosphorylation of p80c-rel was unique to G-CSF in that granulocyte-macrophage colony stimulating factor which also stimulates neutrophils and induces tyrosine phosphorylation does not result in tyrosine phosphorylation of p80c-rel.
S8 1182-1417 Sentence denotes The consequences of p80c-rel tyrosine phosphorylation are not yet known; however, tyrosine-phosphorylated p80c-rel is capable of binding to DNA, and G-CSF stimulation results in an increase in the amount of p80c-rel which binds to DNA.
S9 1418-1634 Sentence denotes These results demonstrate that one of the first biochemical events which occurs in neutrophils following G-CSF stimulation, activation of a tyrosine kinase, leads directly to the tyrosine phosphorylation of p80c-rel.
S10 1635-1779 Sentence denotes Thus, the tyrosine kinase activated by G-CSF appears to directly transduce a signal to a protein which functions as a transcriptional regulator.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-3 protein_molecule denotes rel
T2 49-86 protein_family_or_group denotes granulocyte-colony stimulating factor
T3 134-145 cell_type denotes neutrophils
T4 151-188 protein_family_or_group denotes granulocyte-colony stimulating factor
T5 190-195 protein_family_or_group denotes G-CSF
T6 211-237 other_name denotes enhanced respiratory burst
T7 273-291 other_name denotes tumor cell killing
T8 308-313 protein_family_or_group denotes G-CSF
T9 356-374 protein_family_or_group denotes affinity receptors
T10 376-381 protein_family_or_group denotes G-CSF
T11 407-415 amino_acid_monomer denotes tyrosine
T12 498-506 amino_acid_monomer denotes tyrosine
T13 524-543 amino_acid_monomer denotes Antiphosphotyrosine
T14 592-603 cell_type denotes neutrophils
T15 618-623 protein_family_or_group denotes G-CSF
T16 650-658 amino_acid_monomer denotes tyrosine
T17 734-757 protein_family_or_group denotes monospecific antibodies
T18 770-778 amino_acid_monomer denotes tyrosine
T19 823-831 protein_molecule denotes p80c-rel
T20 835-849 DNA_family_or_group denotes proto-oncogene
T21 875-901 protein_family_or_group denotes transcriptional regulators
T22 916-921 protein_molecule denotes NF-kB
T23 940-948 amino_acid_monomer denotes tyrosine
T24 968-976 protein_molecule denotes p80c-rel
T25 991-996 protein_family_or_group denotes G-CSF
T26 1005-1053 protein_family_or_group denotes granulocyte-macrophage colony stimulating factor
T27 1076-1087 cell_type denotes neutrophils
T28 1100-1108 amino_acid_monomer denotes tyrosine
T29 1144-1152 amino_acid_monomer denotes tyrosine
T30 1172-1180 protein_molecule denotes p80c-rel
T31 1202-1210 protein_molecule denotes p80c-rel
T32 1211-1219 amino_acid_monomer denotes tyrosine
T33 1264-1272 amino_acid_monomer denotes tyrosine
T34 1288-1296 protein_molecule denotes p80c-rel
T35 1331-1336 protein_family_or_group denotes G-CSF
T36 1389-1397 protein_molecule denotes p80c-rel
T37 1466-1484 other_name denotes biochemical events
T38 1501-1512 cell_type denotes neutrophils
T39 1523-1528 protein_family_or_group denotes G-CSF
T40 1558-1566 amino_acid_monomer denotes tyrosine
T41 1597-1605 amino_acid_monomer denotes tyrosine
T42 1625-1633 protein_molecule denotes p80c-rel
T43 1645-1653 amino_acid_monomer denotes tyrosine
T44 1674-1679 protein_family_or_group denotes G-CSF
T45 1753-1778 protein_family_or_group denotes transcriptional regulator

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 273-278 Phenotype denotes tumor HP:0002664

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 273-278 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 100-105 OrganismTaxon denotes human 9606
T2 640-649 OrganismTaxon denotes prominent 37571

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 49-60 Body_part denotes granulocyte http://purl.obolibrary.org/obo/CL_0000094
T2 106-117 Body_part denotes neutrophils http://purl.obolibrary.org/obo/CL_0000775
T3 134-145 Body_part denotes neutrophils http://purl.obolibrary.org/obo/CL_0000775
T4 151-162 Body_part denotes granulocyte http://purl.obolibrary.org/obo/CL_0000094
T5 592-603 Body_part denotes neutrophils http://purl.obolibrary.org/obo/CL_0000775
T6 1005-1016 Body_part denotes granulocyte http://purl.obolibrary.org/obo/CL_0000094
T7 1017-1027 Body_part denotes macrophage http://purl.obolibrary.org/obo/CL_0000235
T8 1076-1087 Body_part denotes neutrophils http://purl.obolibrary.org/obo/CL_0000775
T9 1501-1512 Body_part denotes neutrophils http://purl.obolibrary.org/obo/CL_0000775

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 49-60 Cell denotes granulocyte http://purl.obolibrary.org/obo/CL:0000094
T2 106-117 Cell denotes neutrophils http://purl.obolibrary.org/obo/CL:0000775
T3 134-145 Cell denotes neutrophils http://purl.obolibrary.org/obo/CL:0000775
T4 151-162 Cell denotes granulocyte http://purl.obolibrary.org/obo/CL:0000094
T5 273-283 Cell denotes tumor cell http://purl.obolibrary.org/obo/CL:0001063
T6 592-603 Cell denotes neutrophils http://purl.obolibrary.org/obo/CL:0000775
T7 1005-1016 Cell denotes granulocyte http://purl.obolibrary.org/obo/CL:0000094
T8 1017-1027 Cell denotes macrophage http://purl.obolibrary.org/obo/CL:0000235|http://purl.obolibrary.org/obo/CL:0000394
T10 1076-1087 Cell denotes neutrophils http://purl.obolibrary.org/obo/CL:0000775
T11 1501-1512 Cell denotes neutrophils http://purl.obolibrary.org/obo/CL:0000775