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PubMed:7478623 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-3 protein denotes Bik
T2 13-35 protein denotes death-inducing protein
T3 74-95 protein denotes Bcl-2 family proteins
T4 125-161 protein denotes cellular survival-promoting proteins
T5 202-214 protein denotes Bcl-2 family
T6 283-300 protein denotes cellular proteins
T7 329-345 protein denotes cellular protein
T8 347-350 protein denotes Bik
T9 376-412 protein denotes cellular survival-promoting proteins
T10 414-419 protein denotes Bcl-2
T11 424-430 protein denotes Bcl-xL
T12 447-480 protein denotes viral survival-promoting proteins
T13 482-506 protein denotes Epstein Barr virus-BHRF1
T14 511-532 protein denotes adenovirus E1B-19 kDa
T15 568-571 protein denotes Bik
T16 619-642 protein denotes death-promoting members
T17 650-662 protein denotes Bcl-2 family
T18 664-667 protein denotes Bax
T19 672-675 protein denotes Bak
T20 710-713 protein denotes Bik
T21 751-756 protein denotes Bcl-2
T22 758-764 protein denotes Bcl-XL
T23 766-775 protein denotes EBV-BHRF1
T24 780-790 protein denotes E1B-19 kDa
T25 816-819 protein denotes Bik
T26 852-894 protein denotes cellular and viral anti-apoptotic proteins
T27 902-905 protein denotes Bik
T28 942-945 protein denotes BH1
T29 950-953 protein denotes BH2
T30 994-1006 protein denotes Bcl-2 family
T31 1026-1043 protein denotes amino acid domain
T32 1045-1048 protein denotes BH3
T33 1055-1058 protein denotes Bax
T34 1063-1066 protein denotes Bak

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-3 NP denotes Bik
C2 5-35 NP denotes a novel death-inducing protein
C3 74-95 NP denotes Bcl-2 family proteins
C4 198-226 NP denotes the Bcl-2 family of proteins
C6 321-345 NP denotes a novel cellular protein
C7 347-350 NP denotes Bik
C8 352-356 NP denotes that
C9 372-412 NP denotes the cellular survival-promoting proteins
C10 414-430 NP denotes Bcl-2 and Bcl-xL
C11 443-480 NP denotes the viral survival-promoting proteins
C12 482-532 NP denotes Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa
C5 321-532 NP denotes a novel cellular protein, Bik, that interacts with the cellular survival-promoting proteins, Bcl-2 and Bcl-xL, as well as the viral survival-promoting proteins, Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa
C13 568-571 NP denotes Bik
C15 646-662 NP denotes the Bcl-2 family
C16 664-675 NP denotes Bax and Bak
C14 615-675 NP denotes the death-promoting members of the Bcl-2 family, Bax and Bak
C17 710-713 NP denotes Bik
C18 816-819 NP denotes Bik
C19 902-905 NP denotes Bik
C20 990-1006 NP denotes the Bcl-2 family
C21 1008-1010 NP denotes it
C22 1022-1049 NP denotes a 9 amino acid domain (BH3)
C23 1055-1066 NP denotes Bax and Bak
C24 1067-1072 NP denotes which
C25 1139-1153 NP denotes these proteins
R1 C2 C1 coref-appos a novel death-inducing protein,Bik
R2 C4 C3 coref-ident the Bcl-2 family of proteins,Bcl-2 family proteins
R3 C7 C6 coref-appos Bik,a novel cellular protein
R4 C8 C6 coref-relat that,a novel cellular protein
R5 C10 C9 coref-appos Bcl-2 and Bcl-xL,the cellular survival-promoting proteins
R6 C12 C11 coref-appos Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa,the viral survival-promoting proteins
R7 C5 C1 coref-ident "a novel cellular protein, Bik, that interacts with the cellular survival-promoting proteins, Bcl-2 and Bcl-xL, as well as the viral survival-promoting proteins, Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa",Bik
R8 C13 C5 coref-ident Bik,"a novel cellular protein, Bik, that interacts with the cellular survival-promoting proteins, Bcl-2 and Bcl-xL, as well as the viral survival-promoting proteins, Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa"
R9 C15 C4 coref-ident the Bcl-2 family,the Bcl-2 family of proteins
R10 C16 C14 coref-appos Bax and Bak,"the death-promoting members of the Bcl-2 family, Bax and Bak"
R11 C17 C13 coref-ident Bik,Bik
R12 C18 C17 coref-ident Bik,Bik
R13 C19 C18 coref-ident Bik,Bik
R14 C20 C15 coref-ident the Bcl-2 family,the Bcl-2 family
R15 C21 C19 coref-pron it,Bik
R16 C23 C14 coref-ident Bax and Bak,"the death-promoting members of the Bcl-2 family, Bax and Bak"
R17 C24 C22 coref-relat which,a 9 amino acid domain (BH3)
R18 C25 C23 coref-ident these proteins,Bax and Bak

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-162 Sentence denotes Bik, a novel death-inducing protein shares a distinct sequence motif with Bcl-2 family proteins and interacts with viral and cellular survival-promoting proteins.
S2 163-301 Sentence denotes The survival-promoting activity of the Bcl-2 family of proteins appears to be modulated by interactions between various cellular proteins.
S3 302-533 Sentence denotes We have identified a novel cellular protein, Bik, that interacts with the cellular survival-promoting proteins, Bcl-2 and Bcl-xL, as well as the viral survival-promoting proteins, Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa.
S4 534-676 Sentence denotes In transient transfection assays, Bik promotes cell death in a manner similar to the death-promoting members of the Bcl-2 family, Bax and Bak.
S5 677-895 Sentence denotes This death-promoting activity of Bik can be suppressed by coexpression of Bcl-2, Bcl-XL, EBV-BHRF1 and E1B-19 kDa proteins suggesting that Bik may be a common target for both cellular and viral anti-apoptotic proteins.
S6 896-1154 Sentence denotes While Bik does not show overt homology to the BH1 and BH2 conserved domains characteristic of the Bcl-2 family, it does share a 9 amino acid domain (BH3) with Bax and Bak which may be a critical determinant for the death-promoting activity of these proteins.

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-3 protein_molecule denotes Bik
T2 13-35 protein_family_or_group denotes death-inducing protein
T3 74-95 protein_family_or_group denotes Bcl-2 family proteins
T4 125-161 protein_family_or_group denotes cellular survival-promoting proteins
T5 167-194 other_name denotes survival-promoting activity
T6 202-214 protein_family_or_group denotes Bcl-2 family
T7 283-300 protein_family_or_group denotes cellular proteins
T8 329-345 protein_family_or_group denotes cellular protein
T9 347-350 protein_molecule denotes Bik
T10 376-412 protein_family_or_group denotes cellular survival-promoting proteins
T11 414-419 protein_molecule denotes Bcl-2
T12 424-430 protein_molecule denotes Bcl-xL
T13 447-480 protein_family_or_group denotes viral survival-promoting proteins
T14 482-500 virus denotes Epstein Barr virus
T15 511-521 virus denotes adenovirus
T16 537-566 other_name denotes transient transfection assays
T17 568-571 protein_molecule denotes Bik
T18 581-591 other_name denotes cell death
T19 619-642 protein_family_or_group denotes death-promoting members
T20 650-655 protein_molecule denotes Bcl-2
T21 664-667 protein_molecule denotes Bax
T22 672-675 protein_molecule denotes Bak
T23 710-713 protein_molecule denotes Bik
T24 735-747 other_name denotes coexpression
T25 751-756 protein_molecule denotes Bcl-2
T26 758-764 protein_family_or_group denotes Bcl-XL
T27 766-775 protein_molecule denotes EBV-BHRF1
T28 780-790 protein_molecule denotes E1B-19 kDa
T29 816-819 protein_molecule denotes Bik
T30 902-905 protein_molecule denotes Bik
T31 942-945 protein_molecule denotes BH1
T32 950-953 protein_molecule denotes BH2
T33 994-1006 protein_family_or_group denotes Bcl-2 family
T34 1026-1043 protein_domain_or_region denotes amino acid domain
T35 1045-1048 protein_molecule denotes BH3
T36 1055-1058 protein_molecule denotes Bax
T37 1063-1066 protein_molecule denotes Bak
T38 1111-1135 other_name denotes death-promoting activity