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Test-Species-PubTator

Id	Subject	Object	Predicate	Lexical cue	resolved_to
28	152-157	Species	denotes	human	9606
29	178-183	Species	denotes	human	9606
30	227-232	Species	denotes	human	9606
35	549-554	Species	denotes	human	9606
4	52-57	Species	denotes	human	9606
43	1229-1234	Species	denotes	human	9606
5	94-99	Species	denotes	human	9606

Test-Species-PubDictionaries

Id	Subject	Object	Predicate	Lexical cue	db_id
T1	52-57	OrganismTaxon	denotes	human	9606
T2	94-99	OrganismTaxon	denotes	human	9606
T3	152-157	OrganismTaxon	denotes	human	9606
T4	178-183	OrganismTaxon	denotes	human	9606
T5	227-232	OrganismTaxon	denotes	human	9606
T6	549-554	OrganismTaxon	denotes	human	9606
T7	1229-1234	OrganismTaxon	denotes	human	9606

Test-Species-PubDictionaries-PubMedBERT

Id	Subject	Object	Predicate	Lexical cue	db_id
T1	52-57	Species	denotes	human	9606
T2	94-99	Species	denotes	human	9606
T3	152-157	Species	denotes	human	9606
T4	178-183	Species	denotes	human	9606
T5	227-232	Species	denotes	human	9606
T6	489-494	Species	denotes	major	1925465
T7	549-554	Species	denotes	human	9606
T8	643-648	Species	denotes	major	1925465
T9	772-777	Species	denotes	major	1925465
T10	1229-1234	Species	denotes	human	9606
T11	1346-1356	Species	denotes	the change	1766596

GlyCosmos6-Glycan-Motif-Image

Id	Subject	Object	Predicate	Lexical cue	image
T1	458-474	Glycan_Motif	denotes	lactosylceramide	https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G84224TW\|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G74621DY\|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G20420WT

sentences

Id	Subject	Object	Predicate	Lexical cue
T1	0-127	Sentence	denotes	Stimulation of glycolipid synthesis and exchange by human serum high density lipoprotein-3 in human fibroblasts and leukocytes.
T2	128-387	Sentence	denotes	Upon exposure to either human skin fibroblasts or human circulating leukocytes, the composition of human serum high density lipoprotein-3 (HDL3) was modified by the apparent loss of apolipoprotein A-II and a 2- to 4-fold increase in glycosphingolipid content.
T3	388-675	Sentence	denotes	Exposure of HDL3 to leukocytes produced an increase in the content of lactosylceramide, which is the major glycolipid in leukocytes, whereas exposure of HDL3 to human skin fibroblasts produced predominantly an increase in trihexosylceramide, which is the major glycolipid in fibroblasts.
T4	676-838	Sentence	denotes	Other protein components of HDL3 (such as apolipoprotein A-I) were unaffected and there were no major changes in either neutral lipid or phospholipid composition.
T5	839-1125	Sentence	denotes	The increase in glycosphingolipid content of both cells and reisolated HDL3 particles was HDL3 concentration-dependent up to a concentration of 1 mg/ml and appeared to be the result of a stimulation of cellular glycolipid synthesis by HDL3 and subsequent transfer to HDL3 in the medium.
T6	1126-1241	Sentence	denotes	A similar stimulation could not be produced by either low density lipoprotein or lipoprotein-deficient human serum.
T7	1242-1571	Sentence	denotes	The coaddition of HDL3 and lipoprotein-deficient serum reduced both the loss of apolipoprotein A-II and the change in HDL3 glycolipid content, but not the increase in cellular glycolipid content, suggesting that modification of the apolipoprotein A-II peptide may enhance the ability of HDL3 to acquire new glycolipid from cells.
T1	0-127	Sentence	denotes	Stimulation of glycolipid synthesis and exchange by human serum high density lipoprotein-3 in human fibroblasts and leukocytes.
T2	128-387	Sentence	denotes	Upon exposure to either human skin fibroblasts or human circulating leukocytes, the composition of human serum high density lipoprotein-3 (HDL3) was modified by the apparent loss of apolipoprotein A-II and a 2- to 4-fold increase in glycosphingolipid content.
T3	388-675	Sentence	denotes	Exposure of HDL3 to leukocytes produced an increase in the content of lactosylceramide, which is the major glycolipid in leukocytes, whereas exposure of HDL3 to human skin fibroblasts produced predominantly an increase in trihexosylceramide, which is the major glycolipid in fibroblasts.
T4	676-838	Sentence	denotes	Other protein components of HDL3 (such as apolipoprotein A-I) were unaffected and there were no major changes in either neutral lipid or phospholipid composition.
T5	839-1125	Sentence	denotes	The increase in glycosphingolipid content of both cells and reisolated HDL3 particles was HDL3 concentration-dependent up to a concentration of 1 mg/ml and appeared to be the result of a stimulation of cellular glycolipid synthesis by HDL3 and subsequent transfer to HDL3 in the medium.
T6	1126-1241	Sentence	denotes	A similar stimulation could not be produced by either low density lipoprotein or lipoprotein-deficient human serum.
T7	1242-1571	Sentence	denotes	The coaddition of HDL3 and lipoprotein-deficient serum reduced both the loss of apolipoprotein A-II and the change in HDL3 glycolipid content, but not the increase in cellular glycolipid content, suggesting that modification of the apolipoprotein A-II peptide may enhance the ability of HDL3 to acquire new glycolipid from cells.

GlyCosmos6-Glycan-Motif-Structure

Id	Subject	Object	Predicate	Lexical cue
T1	458-474	https://glytoucan.org/Structures/Glycans/G20420WT	denotes	lactosylceramide
T2	458-474	https://glytoucan.org/Structures/Glycans/G74621DY	denotes	lactosylceramide
T3	458-474	https://glytoucan.org/Structures/Glycans/G84224TW	denotes	lactosylceramide

Glycosmos6-MAT

Id	Subject	Object	Predicate	Lexical cue
T1	158-162	http://purl.obolibrary.org/obo/MAT_0000284	denotes	skin
T2	555-559	http://purl.obolibrary.org/obo/MAT_0000284	denotes	skin

Glycosmos6-GlycoEpitope

Id	Subject	Object	Predicate	Lexical cue
T1	458-474	http://www.glycoepitope.jp/epitopes/EP0078	denotes	lactosylceramide

GlyCosmos15-Glycan

Id	Subject	Object	Predicate	Lexical cue	image
T1	458-474	Glycan	denotes	lactosylceramide	https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW

mondo_disease

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T1	267-271	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T2	400-404	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T3	541-545	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T4	704-708	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T5	910-914	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T6	929-933	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T7	1074-1078	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T8	1106-1110	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T9	1207-1228	Disease	denotes	lipoprotein-deficient	http://purl.obolibrary.org/obo/MONDO_0001822
T10	1260-1264	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T11	1269-1290	Disease	denotes	lipoprotein-deficient	http://purl.obolibrary.org/obo/MONDO_0001822
T12	1360-1364	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487
T13	1529-1533	Disease	denotes	HDL3	http://purl.obolibrary.org/obo/MONDO_0011487

Glycan-GlyCosmos

Id	Subject	Object	Predicate	Lexical cue	image
T1	458-474	Glycan	denotes	lactosylceramide	https://api.glycosmos.org/wurcs2image/latest/png/binary/G84224TW

GlyCosmos-GlycoEpitope

Id	Subject	Object	Predicate	Lexical cue	glycoepitope_id
T1	458-474	http://purl.jp/bio/12/glyco/glycan#Glycan_epitope	denotes	lactosylceramide	http://www.glycoepitope.jp/epitopes/EP0078

GlyCosmos15-CL

Id	Subject	Object	Predicate	Lexical cue	cl_id
T1	100-111	Cell	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL:0000057
T2	116-126	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T3	158-174	Cell	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL:0002620
T4	196-206	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T5	408-418	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T6	509-519	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T7	555-571	Cell	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL:0002620
T8	663-674	Cell	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL:0000057

GlyCosmos15-MONDO

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T1	1207-1228	Disease	denotes	lipoprotein-deficient	MONDO:0001822
T2	1269-1290	Disease	denotes	lipoprotein-deficient	MONDO:0001822

GlyCosmos15-UBERON

Id	Subject	Object	Predicate	Lexical cue	uberon_id
T1	100-111	Body_part	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL_0000057
T2	116-126	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T3	158-174	Body_part	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL_0002620
T4	196-206	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T5	408-418	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T6	509-519	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T7	555-571	Body_part	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL_0002620
T8	663-674	Body_part	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL_0000057

GlyCosmos15-Taxon

Id	Subject	Object	Predicate	Lexical cue	db_id
T1	52-57	Organism	denotes	human	9606
T2	94-99	Organism	denotes	human	9606
T3	152-157	Organism	denotes	human	9606
T4	178-183	Organism	denotes	human	9606
T5	227-232	Organism	denotes	human	9606
T6	549-554	Organism	denotes	human	9606
T7	1229-1234	Organism	denotes	human	9606

GlyCosmos15-Sentences

Id	Subject	Object	Predicate	Lexical cue
T1	0-127	Sentence	denotes	Stimulation of glycolipid synthesis and exchange by human serum high density lipoprotein-3 in human fibroblasts and leukocytes.
T2	128-387	Sentence	denotes	Upon exposure to either human skin fibroblasts or human circulating leukocytes, the composition of human serum high density lipoprotein-3 (HDL3) was modified by the apparent loss of apolipoprotein A-II and a 2- to 4-fold increase in glycosphingolipid content.
T3	388-675	Sentence	denotes	Exposure of HDL3 to leukocytes produced an increase in the content of lactosylceramide, which is the major glycolipid in leukocytes, whereas exposure of HDL3 to human skin fibroblasts produced predominantly an increase in trihexosylceramide, which is the major glycolipid in fibroblasts.
T4	676-838	Sentence	denotes	Other protein components of HDL3 (such as apolipoprotein A-I) were unaffected and there were no major changes in either neutral lipid or phospholipid composition.
T5	839-1125	Sentence	denotes	The increase in glycosphingolipid content of both cells and reisolated HDL3 particles was HDL3 concentration-dependent up to a concentration of 1 mg/ml and appeared to be the result of a stimulation of cellular glycolipid synthesis by HDL3 and subsequent transfer to HDL3 in the medium.
T6	1126-1241	Sentence	denotes	A similar stimulation could not be produced by either low density lipoprotein or lipoprotein-deficient human serum.
T7	1242-1571	Sentence	denotes	The coaddition of HDL3 and lipoprotein-deficient serum reduced both the loss of apolipoprotein A-II and the change in HDL3 glycolipid content, but not the increase in cellular glycolipid content, suggesting that modification of the apolipoprotein A-II peptide may enhance the ability of HDL3 to acquire new glycolipid from cells.

GlyCosmos15-GlycoEpitope

Id	Subject	Object	Predicate	Lexical cue	glycoepitope_id
T1	458-474	http://purl.jp/bio/12/glyco/glycan#Glycan_epitope	denotes	lactosylceramide	http://www.glycoepitope.jp/epitopes/EP0078

GlyCosmos15-FMA

Id	Subject	Object	Predicate	Lexical cue	db_id
T1	58-63	Body_part	denotes	serum	FMA:63083
T2	100-111	Body_part	denotes	fibroblasts	FMA:63877
T3	116-126	Body_part	denotes	leukocytes	FMA:62852
T4	158-174	Body_part	denotes	skin fibroblasts	FMA:0326147
T5	196-206	Body_part	denotes	leukocytes	FMA:62852
T6	233-238	Body_part	denotes	serum	FMA:63083
T7	408-418	Body_part	denotes	leukocytes	FMA:62852
T8	509-519	Body_part	denotes	leukocytes	FMA:62852
T9	555-571	Body_part	denotes	skin fibroblasts	FMA:0326147
T10	663-674	Body_part	denotes	fibroblasts	FMA:63877
T11	1235-1240	Body_part	denotes	serum	FMA:63083
T12	1291-1296	Body_part	denotes	serum	FMA:63083

GlyCosmos15-MAT

Id	Subject	Object	Predicate	Lexical cue	mat_id
T1	158-162	Body_part	denotes	skin	http://purl.obolibrary.org/obo/MAT_0000284
T2	555-559	Body_part	denotes	skin	http://purl.obolibrary.org/obo/MAT_0000284

NCBITAXON

Id	Subject	Object	Predicate	Lexical cue	db_id
T1	52-57	OrganismTaxon	denotes	human	9606
T2	94-99	OrganismTaxon	denotes	human	9606
T3	152-157	OrganismTaxon	denotes	human	9606
T4	178-183	OrganismTaxon	denotes	human	9606
T5	227-232	OrganismTaxon	denotes	human	9606
T6	549-554	OrganismTaxon	denotes	human	9606
T7	1229-1234	OrganismTaxon	denotes	human	9606

Anatomy-UBERON

Id	Subject	Object	Predicate	Lexical cue	uberon_id
T1	100-111	Body_part	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL_0000057
T2	116-126	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T3	158-174	Body_part	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL_0002620
T4	196-206	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T5	408-418	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T6	509-519	Body_part	denotes	leukocytes	http://purl.obolibrary.org/obo/CL_0000738
T7	555-571	Body_part	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL_0002620
T8	663-674	Body_part	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL_0000057

Anatomy-MAT

Id	Subject	Object	Predicate	Lexical cue	mat_id
T1	158-162	Body_part	denotes	skin	http://purl.obolibrary.org/obo/MAT_0000284
T2	555-559	Body_part	denotes	skin	http://purl.obolibrary.org/obo/MAT_0000284

CL-cell

Id	Subject	Object	Predicate	Lexical cue	cl_id
T1	100-111	Cell	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL:0000057
T2	116-126	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T3	158-174	Cell	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL:0002620
T4	196-206	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T5	408-418	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T6	509-519	Cell	denotes	leukocytes	http://purl.obolibrary.org/obo/CL:0000738
T7	555-571	Cell	denotes	skin fibroblasts	http://purl.obolibrary.org/obo/CL:0002620
T8	663-674	Cell	denotes	fibroblasts	http://purl.obolibrary.org/obo/CL:0000057