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PubMed:7240172 JSONTXT

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Test-Species-PubTator

Id Subject Object Predicate Lexical cue resolved_to
3 13-19 Chemical denotes carbon MESH:D002244
4 116-121 Species denotes human 9606
5 122-135 Gene denotes glycophorin A 2993
30 178-183 Species denotes human 9606
31 196-209 Gene denotes glycophorin A 2993
32 300-316 Chemical denotes cyanogen bromide MESH:D003488
33 403-408 Chemical denotes amino -
34 430-433 Chemical denotes 13C MESH:C000615229
35 518-539 Species denotes Staphylococcus aureus 1280
36 686-689 Chemical denotes Val MESH:D014633
37 749-752 Chemical denotes 13C MESH:C000615229
38 792-798 Chemical denotes asialo -
39 843-866 Chemical denotes sialoglyco-octapeptides -
40 887-902 Chemical denotes oligosaccharide MESH:D009844
41 946-962 Chemical denotes tetrasaccharides -
42 982-1053 Chemical denotes NeuNAc alpha 2-3Gal beta 1-3(NeuNAc alpha 2-6)GalNAc alpha 1-O-Ser(Thr) -
43 1097-1103 Chemical denotes GalNAc -
44 1133-1136 Chemical denotes 13C MESH:C000615229
45 1380-1387 Chemical denotes Calcium MESH:D002118
46 1441-1447 Chemical denotes NeuNAc -
47 1448-1451 Chemical denotes 13C MESH:C000615229
48 1550-1570 Chemical denotes N glyco-octapeptides -
49 1579-1599 Chemical denotes N glyco-pentapeptide -
50 1624-1625 Chemical denotes N MESH:D009584
51 1819-1824 Chemical denotes amino -
52 1836-1842 Chemical denotes NeuNAc -
53 1990-2005 Chemical denotes oligosaccharide MESH:D009844

Test-Species-PubDictionaries

Id Subject Object Predicate Lexical cue db_id
T1 116-121 OrganismTaxon denotes human 9606
T2 178-183 OrganismTaxon denotes human 9606
T3 518-539 OrganismTaxon denotes Staphylococcus aureus 1280

Test-Species-PubDictionaries-PubMedBERT

Id Subject Object Predicate Lexical cue db_id
T1 71-76 Species denotes group 536441
T2 116-121 Species denotes human 9606
T3 178-183 Species denotes human 9606
T4 378-383 Species denotes group 536441
T5 518-539 Species denotes Staphylococcus aureus 1280
T6 625-629 Species denotes same 582003
T7 692-695 Species denotes Ala 1272461
T8 792-798 Species denotes asialo 584403
T9 1406-1410 Species denotes also 209674
T10 1734-1738 Species denotes data 1369087
T11 1866-1870 Species denotes data 1369087

sentences

Id Subject Object Predicate Lexical cue
T1 0-136 Sentence denotes Chemical and carbon-13 nuclear magnetic resonance studies of the blood group M and N active sialoglycopeptides from human glycophorin A.
T2 137-296 Sentence denotes The NH2-terminal sialoglycopeptides from human erythrocyte glycophorin A have been obtained by specific proteolytic cleavage and gel filtration chromatography.
T3 297-514 Sentence denotes By cyanogen bromide cleavage, a glycosylated octapeptide was obtained from blood group M donors having an amino acid composition and 13C NMR spectrum consistent with the structure (formula: see text) was demonstrated.
T4 515-691 Sentence denotes By Staphylococcus aureus protease cleavage, a glycosylated pentapeptide was obtained from N donors having the same structure as II, without the carboxyl-terminal sequence Val .
T5 692-697 Sentence denotes Ala .
T6 698-702 Sentence denotes Hse.
T7 703-1054 Sentence denotes Methanolysis/gas chromatographic analysis and 13C NMR spectroscopy of I and II and their asialo derivatives reveal that the M- and N-active sialoglyco-octapeptides both have identical oligosaccharide structures, each containing three O-linked tetrasaccharides with the structure NeuNAc alpha 2-3Gal beta 1-3(NeuNAc alpha 2-6)GalNAc alpha 1-O-Ser(Thr).
T8 1055-1195 Sentence denotes The demonstration of the anomeric form of GalNAc-peptide linkages revealed by 13C NMR has previously been inaccessible by chemical analysis.
T9 1196-1379 Sentence denotes Conformationally, I and II appear identical and both manifest several unusual resonance shifts suggestive of a glycopeptide secondary structure involving four specific hydrogen bonds.
T10 1380-1502 Sentence denotes Calcium ion titration was also found to induce shifts in the NeuNAc 13C resonances that may be of functional significance.
T11 1503-1659 Sentence denotes Serological studies reveal that both the M and N glyco-octapeptides and the N glyco-pentapeptide retain all of the M and N activity of the parent structure.
T12 1660-1727 Sentence denotes Deamination and/or desialylation completely destroys this activity.
T13 1728-1854 Sentence denotes These data are consistent with a model in which the M or N determinant is the NH2-terminal amino acid and a NeuNAc residue(s).
T14 1855-2102 Sentence denotes From these data it is concluded that there is no chemical basis for assertions in the literature that M and N antigens differ in their oligosaccharide structure or that the N antigen is biosynthetically transformed to the M antigen by sialylation.
T1 0-136 Sentence denotes Chemical and carbon-13 nuclear magnetic resonance studies of the blood group M and N active sialoglycopeptides from human glycophorin A.
T2 137-296 Sentence denotes The NH2-terminal sialoglycopeptides from human erythrocyte glycophorin A have been obtained by specific proteolytic cleavage and gel filtration chromatography.
T3 297-514 Sentence denotes By cyanogen bromide cleavage, a glycosylated octapeptide was obtained from blood group M donors having an amino acid composition and 13C NMR spectrum consistent with the structure (formula: see text) was demonstrated.
T4 515-691 Sentence denotes By Staphylococcus aureus protease cleavage, a glycosylated pentapeptide was obtained from N donors having the same structure as II, without the carboxyl-terminal sequence Val .
T5 692-697 Sentence denotes Ala .
T6 698-702 Sentence denotes Hse.
T7 703-1054 Sentence denotes Methanolysis/gas chromatographic analysis and 13C NMR spectroscopy of I and II and their asialo derivatives reveal that the M- and N-active sialoglyco-octapeptides both have identical oligosaccharide structures, each containing three O-linked tetrasaccharides with the structure NeuNAc alpha 2-3Gal beta 1-3(NeuNAc alpha 2-6)GalNAc alpha 1-O-Ser(Thr).
T8 1055-1195 Sentence denotes The demonstration of the anomeric form of GalNAc-peptide linkages revealed by 13C NMR has previously been inaccessible by chemical analysis.
T9 1196-1379 Sentence denotes Conformationally, I and II appear identical and both manifest several unusual resonance shifts suggestive of a glycopeptide secondary structure involving four specific hydrogen bonds.
T10 1380-1502 Sentence denotes Calcium ion titration was also found to induce shifts in the NeuNAc 13C resonances that may be of functional significance.
T11 1503-1659 Sentence denotes Serological studies reveal that both the M and N glyco-octapeptides and the N glyco-pentapeptide retain all of the M and N activity of the parent structure.
T12 1660-1727 Sentence denotes Deamination and/or desialylation completely destroys this activity.
T13 1728-1854 Sentence denotes These data are consistent with a model in which the M or N determinant is the NH2-terminal amino acid and a NeuNAc residue(s).
T14 1855-2102 Sentence denotes From these data it is concluded that there is no chemical basis for assertions in the literature that M and N antigens differ in their oligosaccharide structure or that the N antigen is biosynthetically transformed to the M antigen by sialylation.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 65-70 http://purl.obolibrary.org/obo/MAT_0000083 denotes blood
T2 65-70 http://purl.obolibrary.org/obo/MAT_0000315 denotes blood
T3 372-377 http://purl.obolibrary.org/obo/MAT_0000083 denotes blood
T4 372-377 http://purl.obolibrary.org/obo/MAT_0000315 denotes blood

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 982-988 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T2 1011-1017 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T3 1028-1034 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T4 1097-1103 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T5 1441-1447 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T6 1836-1842 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 65-70 Body_part denotes blood http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315
T3 372-377 Body_part denotes blood http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 982-988 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T2 1011-1017 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T3 1028-1034 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T4 1097-1103 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T5 1441-1447 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR
T6 1836-1842 Glycan denotes NeuNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 184-195 Cell denotes erythrocyte http://purl.obolibrary.org/obo/CL:0000232

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 65-70 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T2 184-195 Body_part denotes erythrocyte http://purl.obolibrary.org/obo/CL_0000232
T3 372-377 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 116-121 Organism denotes human 9606
T2 178-183 Organism denotes human 9606
T3 518-539 Organism denotes Staphylococcus aureus 1280

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-136 Sentence denotes Chemical and carbon-13 nuclear magnetic resonance studies of the blood group M and N active sialoglycopeptides from human glycophorin A.
T2 137-296 Sentence denotes The NH2-terminal sialoglycopeptides from human erythrocyte glycophorin A have been obtained by specific proteolytic cleavage and gel filtration chromatography.
T3 297-514 Sentence denotes By cyanogen bromide cleavage, a glycosylated octapeptide was obtained from blood group M donors having an amino acid composition and 13C NMR spectrum consistent with the structure (formula: see text) was demonstrated.
T4 515-691 Sentence denotes By Staphylococcus aureus protease cleavage, a glycosylated pentapeptide was obtained from N donors having the same structure as II, without the carboxyl-terminal sequence Val .
T5 692-697 Sentence denotes Ala .
T6 698-1054 Sentence denotes Hse. Methanolysis/gas chromatographic analysis and 13C NMR spectroscopy of I and II and their asialo derivatives reveal that the M- and N-active sialoglyco-octapeptides both have identical oligosaccharide structures, each containing three O-linked tetrasaccharides with the structure NeuNAc alpha 2-3Gal beta 1-3(NeuNAc alpha 2-6)GalNAc alpha 1-O-Ser(Thr).
T7 1055-1195 Sentence denotes The demonstration of the anomeric form of GalNAc-peptide linkages revealed by 13C NMR has previously been inaccessible by chemical analysis.
T8 1196-1379 Sentence denotes Conformationally, I and II appear identical and both manifest several unusual resonance shifts suggestive of a glycopeptide secondary structure involving four specific hydrogen bonds.
T9 1380-1502 Sentence denotes Calcium ion titration was also found to induce shifts in the NeuNAc 13C resonances that may be of functional significance.
T10 1503-1659 Sentence denotes Serological studies reveal that both the M and N glyco-octapeptides and the N glyco-pentapeptide retain all of the M and N activity of the parent structure.
T11 1660-1727 Sentence denotes Deamination and/or desialylation completely destroys this activity.
T12 1728-1854 Sentence denotes These data are consistent with a model in which the M or N determinant is the NH2-terminal amino acid and a NeuNAc residue(s).
T13 1855-2102 Sentence denotes From these data it is concluded that there is no chemical basis for assertions in the literature that M and N antigens differ in their oligosaccharide structure or that the N antigen is biosynthetically transformed to the M antigen by sialylation.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 65-70 Body_part denotes blood FMA:9670
T2 184-195 Body_part denotes erythrocyte FMA:62845
T3 372-377 Body_part denotes blood FMA:9670

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 65-70 Body_part denotes blood http://purl.obolibrary.org/obo/MAT_0000315
T2 372-377 Body_part denotes blood http://purl.obolibrary.org/obo/MAT_0000315

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 116-121 OrganismTaxon denotes human 9606
T2 178-183 OrganismTaxon denotes human 9606
T3 518-539 OrganismTaxon denotes Staphylococcus aureus 1280

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 65-70 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T2 184-195 Body_part denotes erythrocyte http://purl.obolibrary.org/obo/CL_0000232
T3 372-377 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 184-195 Cell denotes erythrocyte http://purl.obolibrary.org/obo/CL:0000232